VPS25

Last updated
VPS25
Protein VPS25 PDB 2ZME.png
Available structures
PDB Ortholog search: PDBe RCSB
Identifiers
Aliases VPS25 , DERP9, EAP20, FAP20, vacuolar protein sorting 25 homolog
External IDs OMIM: 610907; MGI: 106354; HomoloGene: 6303; GeneCards: VPS25; OMA:VPS25 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_032353

NM_001284411
NM_001284412
NM_001284414
NM_026776

RefSeq (protein)

NP_115729
NP_115729.1

NP_001271340
NP_001271341
NP_001271343
NP_081052

Location (UCSC) Chr 17: 42.77 – 42.78 Mb Chr 11: 101.14 – 101.15 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse
ESCRT-II complex subunit
PDB 1xb4 EBI.jpg
crystal structure of subunit vps25 of the endosomal trafficking complex escrt-ii
Identifiers
SymbolESCRT-II
Pfam PF05871
InterPro IPR008570
Available protein structures:
Pfam   structures / ECOD  
PDB RCSB PDB; PDBe; PDBj
PDBsum structure summary

Vacuolar protein-sorting-associated protein 25 is a protein that in humans is encoded by the VPS25 gene. [5] [6]

It is a component of the endosome-associated complex ESCRT-II (Endosomal Sorting Complexes Required for Transport protein II). ESCRT (ESCRT-I, -II, -III) complexes orchestrate efficient sorting of ubiquitinated transmembrane receptors to lysosomes via multivesicular bodies (MVBs). [7] ESCRT-II recruits the transport machinery for protein sorting at MVB. [8] In addition, the human ESCRT-II has been shown to form a complex with RNA polymerase II elongation factor ELL in order to exert transcriptional control activity. ESCRT-II transiently associates with the endosomal membrane and thereby initiates the formation of ESCRT-III, a membrane-associated protein complex that functions immediately downstream of ESCRT-II during sorting of MVB cargo. ESCRT-II in turn functions downstream of ESCRT-I, a protein complex that binds to ubiquitinated endosomal cargo. [9]

ESCRT-II is a trilobal complex composed of two copies of vps25, one copy of vps22 and the C-terminal region of vps36. The crystal structure of vps25 revealed two winged-helix domains, the N-terminal domain of vps25 interacting with vps22 and vps36. [10]

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000131475 Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000078656 Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Yorikawa C, Shibata H, Waguri S, Hatta K, Horii M, Katoh K, Kobayashi T, Uchiyama Y, Maki M (Mar 2005). "Human CHMP6, a myristoylated ESCRT-III protein, interacts directly with an ESCRT-II component EAP20 and regulates endosomal cargo sorting". Biochem J. 387 (Pt 1): 17–26. doi:10.1042/BJ20041227. PMC   1134928 . PMID   15511219.
  6. "Entrez Gene: VPS25 vacuolar protein sorting 25 homolog (S. cerevisiae)".
  7. Gill DJ, Teo H, Sun J, Perisic O, Veprintsev DB, Emr SD, Williams RL (January 2007). "Structural insight into the ESCRT-I/-II link and its role in MVB trafficking". EMBO J. 26 (2): 600–12. doi:10.1038/sj.emboj.7601501. PMC   1783442 . PMID   17215868.
  8. Teo H, Perisic O, Gonzalez B, Williams RL (October 2004). "ESCRT-II, an endosome-associated complex required for protein sorting: crystal structure and interactions with ESCRT-III and membranes". Dev. Cell. 7 (4): 559–69. doi: 10.1016/j.devcel.2004.09.003 . PMID   15469844.
  9. Babst M, Katzmann DJ, Snyder WB, Wendland B, Emr SD (August 2002). "Endosome-associated complex, ESCRT-II, recruits transport machinery for protein sorting at the multivesicular body". Dev. Cell. 3 (2): 283–9. doi: 10.1016/S1534-5807(02)00219-8 . PMID   12194858.
  10. Wernimont AK, Weissenhorn W (December 2004). "Crystal structure of subunit VPS25 of the endosomal trafficking complex ESCRT-II". BMC Struct. Biol. 4 (1): 10. doi: 10.1186/1472-6807-4-10 . PMC   539351 . PMID   15579210.

Further reading

This article incorporates text from the public domain Pfam and InterPro: IPR008570