ATP6V1F

ATP6V1F
Identifiers
Aliases	ATP6V1F , ATP6S14, VATF, Vma7, ATPase H+ transporting V1 subunit F
External IDs	OMIM: 607160 MGI: 1913394 HomoloGene: 3119 GeneCards: ATP6V1F
Gene location (Human) Chr. Chromosome 7 (human) [1] Band 7q32.1 Start 128,862,856 bp [1] End 128,865,847 bp [1]
Gene location (Mouse) Chr. Chromosome 6 (mouse) [2] Band 6|6 A3.3 Start 29,467,717 bp [2] End 29,470,511 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in prefrontal cortex cingulate gyrus monocyte nucleus accumbens amygdala Brodmann area 9 caudate nucleus kidney hypothalamus pons Top expressed in yolk sac kidney proximal tubule olfactory bulb cerebellum mirror urinary bladder hippocampus proper adrenal gland islet of Langerhans More reference expression data BioGPS More reference expression data
Gene ontology Molecular function protein binding proton-transporting ATPase activity, rotational mechanism proton transmembrane transporter activity ATPase-coupled ion transmembrane transporter activity ATPase activity Cellular component proton-transporting V-type ATPase, V1 domain cytosol proton-transporting two-sector ATPase complex vacuolar proton-transporting V-type ATPase complex membrane extracellular exosome Biological process insulin receptor signaling pathway ion transport transferrin transport phagosome acidification ion transmembrane transport transport proton transmembrane transport Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 9296 66144 Ensembl ENSG00000128524 ENSMUSG00000004285 UniProt Q16864 Q9D1K2 RefSeq (mRNA) NM_004231 NM_001198909 NM_025381 RefSeq (protein) NP_001185838 NP_004222 NP_079657 Location (UCSC) Chr 7: 128.86 – 128.87 Mb Chr 6: 29.47 – 29.47 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

ATP-synt_F
Identifiers
Symbol	ATP-synt_F
Pfam	PF01990
InterPro	IPR008218
Available protein structures: Pfam   structures / ECOD   PDB RCSB PDB; PDBe; PDBj PDBsum structure summary

V-type proton ATPase subunit F is an enzyme that in humans is encoded by the ATP6V1F gene. ^{[5] [6] [7]}

This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A and three B subunits, two G subunits plus the C, D, E, F, and H subunits. The V1 domain contains the ATP catalytic site. The V0 domain consists of five different subunits: a, c, c', c", and d. Additional isoforms of many of the V1 and V0 subunit proteins are encoded by multiple genes or alternatively spliced transcript variants. This encoded protein is the V1 domain F subunit protein. ^[7]

Subunit F is a 16 kDa protein that is required for the assembly and activity of V-ATPase, and has a potential role in the differential targeting and regulation of the enzyme for specific organelles. This subunit is not necessary for the rotation of the ATPase V1 rotor, but it does promote catalysis. ^[8]

References

1. GRCh38: Ensembl release 89: ENSG00000128524 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000004285 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Fujiwara T, Kawai A, Shimizu F, Hirano H, Okuno S, Takeda S, Ozaki K, Shimada Y, Nagata M, Watanabe T, et al. (Mar 1996). "Cloning, sequencing and expression of a novel cDNA encoding human vacuolar ATPase (14-kDa subunit)". DNA Res. 2 (3): 107–11. doi: 10.1093/dnares/2.3.107 . PMID   8581736.
6. Peng SB, Crider BP, Tsai SJ, Xie XS, Stone DK (Jun 1996). "Identification of a 14-kDa subunit associated with the catalytic sector of clathrin-coated vesicle H+-ATPase". J Biol Chem. 271 (6): 3324–7. doi: 10.1074/jbc.271.6.3324 . PMID   8621738.
7. "Entrez Gene: ATP6V1F ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F".
8. Imamura H, Ikeda C, Yoshida M, Yokoyama K (April 2004). "The F subunit of Thermus thermophilus V1-ATPase promotes ATPase activity but is not necessary for rotation". J. Biol. Chem. 279 (17): 18085–90. doi: 10.1074/jbc.M314204200 . PMID   14963028.

External links

• Human ATP6V1F genome location and ATP6V1F gene details page in the UCSC Genome Browser .

Further reading

• Finbow ME, Harrison MA (1997). "The vacuolar H+-ATPase: a universal proton pump of eukaryotes". Biochem. J. 324 (3): 697–712. doi:10.1042/bj3240697. PMC   1218484 . PMID   9210392.
• Stevens TH, Forgac M (1998). "Structure, function and regulation of the vacuolar (H+)-ATPase". Annu. Rev. Cell Dev. Biol. 13: 779–808. doi:10.1146/annurev.cellbio.13.1.779. PMID   9442887.
• Nelson N, Harvey WR (1999). "Vacuolar and plasma membrane proton-adenosinetriphosphatases". Physiol. Rev. 79 (2): 361–85. doi:10.1152/physrev.1999.79.2.361. PMID   10221984. S2CID   1477911.
• Forgac M (1999). "Structure and properties of the vacuolar (H+)-ATPases". J. Biol. Chem. 274 (19): 12951–4. doi: 10.1074/jbc.274.19.12951 . PMID   10224039.
• Kane PM (1999). "Introduction: V-ATPases 1992-1998". J. Bioenerg. Biomembr. 31 (1): 3–5. doi:10.1023/A:1001884227654. PMID   10340843.
• Wieczorek H, Brown D, Grinstein S, et al. (1999). "Animal plasma membrane energization by proton-motive V-ATPases". BioEssays. 21 (8): 637–48. doi:10.1002/(SICI)1521-1878(199908)21:8<637::AID-BIES3>3.0.CO;2-W. PMID   10440860. S2CID   23505139.
• Nishi T, Forgac M (2002). "The vacuolar (H+)-ATPases--nature's most versatile proton pumps". Nat. Rev. Mol. Cell Biol. 3 (2): 94–103. doi:10.1038/nrm729. PMID   11836511. S2CID   21122465.
• Kawasaki-Nishi S, Nishi T, Forgac M (2003). "Proton translocation driven by ATP hydrolysis in V-ATPases". FEBS Lett. 545 (1): 76–85. doi:10.1016/S0014-5793(03)00396-X. PMID   12788495. S2CID   10507213.
• Morel N (2004). "Neurotransmitter release: the dark side of the vacuolar-H+ATPase". Biol. Cell. 95 (7): 453–7. doi: 10.1016/S0248-4900(03)00075-3 . PMID   14597263. S2CID   17519696.
• Cross SH, Charlton JA, Nan X, Bird AP (1994). "Purification of CpG islands using a methylated DNA binding column". Nat. Genet. 6 (3): 236–44. doi:10.1038/ng0394-236. PMID   8012384. S2CID   12847618.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.

This article incorporates text from the public domain Pfam and InterPro: IPR008218