| Balnearium lithotrophicum | |
|---|---|
Scientific classification  | |
| Domain: | Bacteria |
| Phylum: | Aquificota |
| Order: | Desulfurobacteriales |
| Family: | Desulfurobacteriaceae |
| Genus: | Balnearium |
| Species: | B. lithotrophicum |
| Binomial name | |
| Balnearium lithotrophicum Takai et al. 2003 | |
Balnearium lithotrophicum is a species of bacterium described in 2003 and classified as belonging to the Aquificota.
Balnearium lithotrophicum was recently found in the Suiyo Seamount and isolated as its own species. Suiyo Seamount is found off the east coast of Japan in an underwater volcano. [1] This underwater volcano vent release gases and heat into the deep ocean at 1,418 m deep. [1] These vents create new ecosystems where little other life live. There are many microbes that thrive in these extreme conditions known as thermophiles. The Balnearium lithotrophicum lives near the vent but not directly on it. At the source of the vent temperatures can be up to 290 °C but where the Balnearium lithotrophicum thrives, temperatures are around 70–75 °C. [2] This classifies Balnearium lithotrophicum as a thermophile because it thrives in relatively extreme heat and pressure conditions.
At this depth, there is no light and little oxygen, so Balnearium lithotrophicum is an obligate anaerobe bacterium. An obligate anaerobe is a bacterium that cannot survive in the presence of oxygen that is found in the atmosphere. Balnearium lithotrophicum is identified as a chemolithoautotroph, “eater of rock”, that reduces strictly inorganic compounds in order to survive. It gets its energy from metabolizing hydrogen from the black smoker chimney. [2] The carbon source it uses to survive comes from the carbon dioxide in the water. [2] Balnearium lithotrophicum can live in a pH between 5.0 and 7.0 but prefers 5.4. [2] In addition, for growth the NaCl amount in the water should be between 0.8 and 5.6 percent. [2] Ammonium is the main nitrogen source of Balnearium lithotrophicum. [2] The genomic DNA had 34.6 mol% of C+G bases. [2]
The appearance of the Balnearium lithotrophicum is a short rod that is narrower in the middle. [2] These organisms have been known to exist in this submarine ecosystem; however, Balnearium lithotrophicum was only recently separated from similar extremophiles. The close relatives it was divided from include Thermovibrio ruber and Desulfurobacterium thermolithotrophum . [2] They share many features but were separated based on certain physiological characteristics that Balnearium lithotrophicum maintains. [2]
An extremophile is an organism that is able to live in extreme environments, i.e. environments with conditions approaching or expanding the limits of what known life can adapt to, such as extreme temperature, radiation, salinity, or pH level.
A thermophile is an organism—a type of extremophile—that thrives at relatively high temperatures, between 41 and 122 °C. Many thermophiles are archaea, though they can be bacteria or fungi. Thermophilic eubacteria are suggested to have been among the earliest bacteria.
A mesophile is an organism that grows best in moderate temperature, neither too hot nor too cold, with an optimum growth range from 20 to 45 °C. The optimum growth temperature for these organisms is 37°C. The term is mainly applied to microorganisms. Organisms that prefer extreme environments are known as extremophiles. Mesophiles have diverse classifications, belonging to two domains: Bacteria, Archaea, and to kingdom Fungi of domain Eucarya. Mesophiles belonging to the domain Bacteria can either be gram-positive or gram-negative. Oxygen requirements for mesophiles can be aerobic or anaerobic. There are three basic shapes of mesophiles: coccus, bacillus, and spiral.
A hydrothermal vent is a fissure on the seabed from which geothermally heated water discharges. They are commonly found near volcanically active places, areas where tectonic plates are moving apart at mid-ocean ridges, ocean basins, and hotspots. Hydrothermal deposits are rocks and mineral ore deposits formed by the action of hydrothermal vents.
Obligate anaerobes are microorganisms killed by normal atmospheric concentrations of oxygen (20.95% O2). Oxygen tolerance varies between species, with some species capable of surviving in up to 8% oxygen, while others lose viability in environments with an oxygen concentration greater than 0.5%.
Methanopyrus is a genus of the Methanopyraceae.
"Aquifex aeolicus" is a chemolithoautotrophic, Gram-negative, motile, hyperthermophilic bacterium. "A. aeolicus" is generally rod-shaped with an approximate length of 2.0-6.0μm and a diameter of 0.4-0.5μm. "A. aeolicus" is neither validly nor effectively published and, having no standing in nomenclature, should be styled in quotation marks. It is one of a handful of species in the Aquificota phylum, an unusual group of thermophilic bacteria that are thought to be some of the oldest species of bacteria, related to filamentous bacteria first observed at the turn of the century. "A. aeolicus" is also believed to be one of the earliest diverging species of thermophilic bacteria. "A. aeolicus" grows best in water between 85 °C and 95 °C, and can be found near underwater volcanoes or hot springs. It requires oxygen to survive but has been found to grow optimally under microaerophilic conditions. Due to its high stability against high temperature and lack of oxygen, "A. aeolicus" is a good candidate for biotechnological applications as it is believed to have potential to be used as hydrogenases in an attractive H2/O2 biofuel cell, replacing chemical catalysts. This can be useful for improving industrial processes.
Aquifex pyrophilus is a gram-negative, non-spore forming, rod-shaped bacteria. It is one of a handful of species in the Aquificota phylum, which are a group of thermophilic bacteria that are found near underwater volcanoes or hot springs.
Sulfur-reducing bacteria are microorganisms able to reduce elemental sulfur (S0) to hydrogen sulfide (H2S). These microbes use inorganic sulfur compounds as electron acceptors to sustain several activities such as respiration, conserving energy and growth, in absence of oxygen. The final product or these processes, sulfide, has a considerable influence on the chemistry of the environment and, in addition, is used as electron donor for a large variety of microbial metabolisms. Several types of bacteria and many non-methanogenic archaea can reduce sulfur. Microbial sulfur reduction was already shown in early studies, which highlighted the first proof of S0 reduction in a vibrioid bacterium from mud, with sulfur as electron acceptor and H
2 as electron donor. The first pure cultured species of sulfur-reducing bacteria, Desulfuromonas acetoxidans, was discovered in 1976 and described by Pfennig Norbert and Biebel Hanno as an anaerobic sulfur-reducing and acetate-oxidizing bacterium, not able to reduce sulfate. Only few taxa are true sulfur-reducing bacteria, using sulfur reduction as the only or main catabolic reaction. Normally, they couple this reaction with the oxidation of acetate, succinate or other organic compounds. In general, sulfate-reducing bacteria are able to use both sulfate and elemental sulfur as electron acceptors. Thanks to its abundancy and thermodynamic stability, sulfate is the most studied electron acceptor for anaerobic respiration that involves sulfur compounds. Elemental sulfur, however, is very abundant and important, especially in deep-sea hydrothermal vents, hot springs and other extreme environments, making its isolation more difficult. Some bacteria – such as Proteus, Campylobacter, Pseudomonas and Salmonella – have the ability to reduce sulfur, but can also use oxygen and other terminal electron acceptors.
Hydrogen-oxidizing bacteria are a group of facultative autotrophs that can use hydrogen as an electron donor. They can be divided into aerobes and anaerobes. The former use hydrogen as an electron donor and oxygen as an acceptor while the latter use sulphate or nitrogen dioxide as electron acceptors. Species of both types have been isolated from a variety of environments, including fresh waters, sediments, soils, activated sludge, hot springs, hydrothermal vents and percolating water.
In taxonomy, Staphylothermus is a genus of the Desulfurococcaceae.[1]
The Endeavour Hydrothermal Vents are a group of hydrothermal vents in the north-eastern Pacific Ocean, located 260 kilometres (160 mi) southwest of Vancouver Island, British Columbia, Canada. The vent field lies 2,250 metres (7,380 ft) below sea level on the northern Endeavour segment of the Juan de Fuca Ridge. In 1982, dredged sulfide samples were recovered from the area covered in small tube worms and prompted a return to the vent field in August 1984, where the active vent field was confirmed by HOV Alvin on leg 10 of cruise AII-112.
Hydrogenobacter thermophilus is an extremely thermophilic, straight rod (bacillus) bacterium. TK-6 is the type strain for this species. It is a Gram negative, non-motile, obligate chemolithoautotroph. It belongs to one of the earliest branching order of Bacteria. H. thermophilus TK-6 lives in soil that contains hot water. It was one of the first hydrogen oxidizing bacteria described leading to the discovery, and subsequent examination of many unique proteins involved in its metabolism. Its discovery contradicted the idea that no obligate hydrogen oxidizing bacteria existed, leading to a new understanding of this physiological group. Additionally, H. thermophilus contains a fatty acid composition that had not been observed before.
Sulfurimonas is a bacterial genus within the class of Campylobacterota, known for reducing nitrate, oxidizing both sulfur and hydrogen, and containing Group IV hydrogenases. This genus consists of four species: Sulfurimonas autorophica, Sulfurimonas denitrificans, Sulfurimonas gotlandica, and Sulfurimonas paralvinellae. The genus' name is derived from "sulfur" in Latin and "monas" from Greek, together meaning a “sulfur-oxidizing rod”. The size of the bacteria varies between about 1.5-2.5 μm in length and 0.5-1.0 μm in width. Members of the genus Sulfurimonas are found in a variety of different environments which include deep sea-vents, marine sediments, and terrestrial habitats. Their ability to survive in extreme conditions is attributed to multiple copies of one enzyme. Phylogenetic analysis suggests that members of the genus Sulfurimonas have limited dispersal ability and its speciation was affected by geographical isolation rather than hydrothermal composition. Deep ocean currents affect the dispersal of Sulfurimonas spp., influencing its speciation. As shown in the MLSA report of deep-sea hydrothermal vents Campylobacterota, Sulfurimonas has a higher dispersal capability compared with deep sea hydrothermal vent thermophiles, indicating allopatric speciation.
Thermotoga elfii is a rod-shaped, glucose-fermenting bacterium. The type strain of T. elfii is SEBR 6459T. The genus Thermotoga was originally thought to be strictly found surrounding submarine hydrothermal vents, but this organism was subsequently isolated in African oil wells in 1995. A protective outer sheath allows this microbe to be thermophilic. This organism cannot function in the presence of oxygen making it strictly anaerobic. Some research proposes that the thiosulfate-reducing qualities in this organism could lead to decreased bio-corrosion in oil equipment in industrial settings.
Persephonella marina is a Gram-negative, rod shaped bacteria that is a member of the Aquificota phylum. Stemming from Greek, the name Persephonella is based upon the mythological goddess Persephone. Marina stems from a Latin origin, meaning "belonging to the sea". It is a thermophile with an obligate chemolithoautotrophic metabolism. Growth of P. marina can occur in pairs or individually, but is rarely seen aggregating in large groups. The organism resides on sulfidic chimneys in the deep ocean and has never been documented as a pathogen.
Lebetimonas is a genus of bacteria from the family Nautiliaceae.
The hydrothermal vent microbial community includes all unicellular organisms that live and reproduce in a chemically distinct area around hydrothermal vents. These include organisms in the microbial mat, free floating cells, or bacteria in an endosymbiotic relationship with animals. Chemolithoautotrophic bacteria derive nutrients and energy from the geological activity at Hydrothermal vents to fix carbon into organic forms. Viruses are also a part of the hydrothermal vent microbial community and their influence on the microbial ecology in these ecosystems is a burgeoning field of research.
Nitratiruptor sp. is a genus of deep sea gram-negative Campylobacterota isolated from Iheya North Hydrothermal field in Okinawa Trough (Japan). This rod-shaped microorganism grows chemolithoautotrophically in a wide variety of electron donors and acceptors in absence of light and oxygen. It is also a thermophilic group capable of growing within the range of 37–65 °C with the optimal at 55 °C.
Thermocrinis jamiesonii is a Gram-negative bacterium that is thermophilic, growing at temperatures ranging from 70 to 85°C. It grows as a chemolithoautotroph or chemolithoheterotroph, using thiosulfate as its sole electron donor, and is obligately microaerophilic. The strain GBS1T was isolated from Great Boiling Spring, Nevada, USA.