CPNE6

CPNE6
Identifiers
Aliases	CPNE6 , copine 6
External IDs	OMIM: 605688 MGI: 1334445 HomoloGene: 81815 GeneCards: CPNE6
Gene location (Human) Chr. Chromosome 14 (human) [1] Band 14q11.2 Start 24,070,837 bp [1] End 24,078,100 bp [1]
Gene location (Mouse) Chr. Chromosome 14 (mouse) [2] Band 14|14 C3 Start 55,510,445 bp [2] End 55,517,431 bp [2]
RNA expression pattern More reference expression data
Gene ontology Molecular function • calcium ion binding • transporter activity • phosphatidylserine binding • GO:0001948 protein binding • calcium-dependent phospholipid binding Cellular component • cytoplasm • endosome • perikaryon • cell projection • membrane • clathrin-coated endocytic vesicle • plasma membrane • axon • dendrite • extracellular exosome • GO:0016023 cytoplasmic vesicle • clathrin-coated vesicle Biological process • cellular response to calcium ion • cell differentiation • lipid metabolism • nervous system development • glycerophospholipid biosynthetic process • positive regulation of dendrite extension • vesicle-mediated transport • chemical synaptic transmission Sources:Amigo / QuickGO
Orthologs
Species	Human	Mouse
Entrez	9362	12891
Ensembl	ENSG00000100884	ENSMUSG00000022212
UniProt	O95741	Q9Z140
RefSeq (mRNA)	NM_001280558 NM_006032	NM_001136057 NM_001146183 NM_009947 NM_001360193
RefSeq (protein)	NP_001267487 NP_006023	NP_001129529 NP_001139655 NP_034077 NP_001347122
Location (UCSC)	Chr 14: 24.07 – 24.08 Mb	Chr 14: 55.51 – 55.52 Mb
PubMed search	[3]	[4]
Wikidata
View/Edit Human View/Edit Mouse

Copine-6 is a protein that in humans is encoded by the CPNE6 gene. ^{[5] [6]}

This gene encodes a brain-specific member of the copine family, which is composed of calcium-dependent membrane-binding proteins. The gene product contains two N-terminal C2 domains, and one von Willebrand factor A domain. It may have a role in synaptic plasticity. ^[6]

References

1. GRCh38: Ensembl release 89: ENSG00000100884 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000022212 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Nakayama T, Yaoi T, Yasui M, Kuwajima G (Jul 1998). "N-copine: a novel two C2-domain-containing protein with neuronal activity-regulated expression". FEBS Lett. 428 (1–2): 80–4. doi:10.1016/S0014-5793(98)00497-9. PMID   9645480. S2CID   27969998.
6. "Entrez Gene: CPNE6 copine VI (neuronal)".

External links

• Human CPNE6 genome location and CPNE6 gene details page in the UCSC Genome Browser .

Further reading

• Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID   8125298.
• Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID   9373149.
• Nakayama T, Yaoi T, Kuwajima G (1999). "Localization and subcellular distribution of N-copine in mouse brain". J. Neurochem. 72 (1): 373–9. doi: 10.1046/j.1471-4159.1999.0720373.x . PMID   9886090.
• Nakayama T, Yaoi T, Kuwajima G, et al. (1999). "Ca2(+)-dependent interaction of N-copine, a member of the two C2 domain protein family, with OS-9, the product of a gene frequently amplified in osteosarcoma". FEBS Lett. 453 (1–2): 77–80. doi: 10.1016/S0014-5793(99)00700-0 . PMID   10403379.
• Caudell EG, Caudell JJ, Tang CH, et al. (2000). "Characterization of human copine III as a phosphoprotein with associated kinase activity". Biochemistry. 39 (42): 13034–43. doi:10.1021/bi001250v. PMID   11041869.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.