Caenorhabditis elegans is a free-living transparent nematode about 1 mm in length that lives in temperate soil environments. It is the type species of its genus. The name is a blend of the Greek caeno- (recent), rhabditis (rod-like) and Latin elegans (elegant). In 1900, Maupas initially named it Rhabditides elegans. Osche placed it in the subgenus Caenorhabditis in 1952, and in 1955, Dougherty raised Caenorhabditis to the status of genus.
Streptomyces is the largest genus of Actinomycetota, and the type genus of the family Streptomycetaceae. Over 700 species of Streptomyces bacteria have been described. As with the other Actinomycetota, streptomycetes are gram-positive, and have very large genomes with high GC content. Found predominantly in soil and decaying vegetation, most streptomycetes produce spores, and are noted for their distinct "earthy" odor that results from production of a volatile metabolite, geosmin. Different strains of the same species may colonize very diverse environments.
Caenorhabditis briggsae is a small nematode, closely related to Caenorhabditis elegans. The differences between the two species are subtle. The male tail in C. briggsae has a slightly different morphology from C. elegans. Other differences include changes in vulval precursor competence and the placement of the excretory duct opening. C. briggsae is frequently used to study the differences between it and the more intimately understood C. elegans, especially at the DNA and protein sequence level. Several mutant strains of C. briggsae have also been isolated that facilitate genetic analysis of this organism. C. briggsae, like C. elegans, is a hermaphrodite. The genome sequence for C. briggsae was determined in 2003.
Caenorhabditis is a genus of nematodes which live in bacteria-rich environments like compost piles, decaying dead animals and rotting fruit. The name comes from Greek: caeno- ; rhabditis = rod-like. In 1900, Maupas initially named the species Rhabditis elegans, Osche placed it in the subgenus Caenorhabditis in 1952, and in 1955, Dougherty raised Caenorhabditis to the status of genus.
Caenorhabditis brenneri is a small nematode, closely related to the model organism Caenorhabditis elegans. Its genome is being sequenced by Washington University in St. Louis Genome Sequencing Center. This species has previously been referred to as C. sp 4 and Caenorhabditis sp. CB5161, but was recently formally described and given its scientific name. This name is in honor of Sydney Brenner, recognizing his pioneering role in starting active research in the field of C. elegans biology and development.
Caenorhabditis remanei is a species of nematode found in North America and Europe, and likely lives throughout the temperate world. Several strains have been developed in the laboratory.
Caenorhabditis japonica is a species of nematodes in the genus Caenorhabditis. Its genome was sequenced by the McDonnell Genome Institute at Washington University School of Medicine. This gonochoristic species is found in the 'Japonica' group, the sister clade to the 'Elegans' group, in the 'Elegans' supergroup.
Caenorhabditis elegans- microbe interactions are defined as any interaction that encompasses the association with microbes that temporarily or permanently live in or on the nematode C. elegans. The microbes can engage in a commensal, mutualistic or pathogenic interaction with the host. These include bacterial, viral, unicellular eukaryotic, and fungal interactions. In nature C. elegans harbours a diverse set of microbes. In contrast, C. elegans strains that are cultivated in laboratories for research purposes have lost the natural associated microbial communities and are commonly maintained on a single bacterial strain, Escherichia coli OP50. However, E. coli OP50 does not allow for reverse genetic screens because RNAi libraries have only been generated in strain HT115. This limits the ability to study bacterial effects on host phenotypes. The host microbe interactions of C. elegans are closely studied because of their orthologs in humans. Therefore, the better we understand the host interactions of C. elegans the better we can understand the host interactions within the human body.
Caenorhabditis angaria is a small nematode, in the same genus as the model organism Caenorhabditis elegans. The name is from the Latin after the tendency to ride weevils. Prior to 2011, the species was referred to as C. sp. 2, C. sp. 3, and C. sp. PS1010. Its genome was sequenced at the California Institute of Technology in 2010. This species is gonochoristic. It has distinct morphology and behavior compared to C. elegans; notably, C. angaria males exhibit a spiral mating behavior. Its divergence from C. elegans is similar to the distance between humans and fish. C. castelli is its closest relative, and the two species can produce F1 hybrids.
Caenorhabditis tropicalis is a species of Caenorhabditis nematodes, belonging to the Elegans super-group and Elegans group within the genus. It is a close relative of C. wallacei.C. tropicalis is collected frequently in tropical South America, Caribbean islands, and various islands in the Indian and Pacific Oceans from rotting fruit, flowers and stems. C. tropicalis was referred to as “C. sp. 11” prior to 2014.
Parastrachia japonensis is a species of true bugs belonging to the family Parastrachiidae. It is one of the two species in the genus, both from Eastern Asia.
Caenorhabditis plicata is a species of nematodes in the genus Caenorhabditis. It was described on carrion in Germany and is phoretic on carrion visiting beetles.
Cis castaneus is a species of tree-fungus beetles in the family Ciidae.
Caenorhabditis portoensis is a species of nematode in the genus Caenorhabditis. First wild isolate sample was found on a rotting apple in Portugal.
Caenorhabditis nigoni is a male-female species in the Elegans group of the genus Caenorhabditis, first identified and described as "Caenorhabditis species 9" or "C. sp. 9" before being renamed as "C. nigoni". The specific epithet is a tribute to Victor Nigon who first studied Caenorhabditis elegans in the laboratory with Ellsworth Dougherty in the 1940s. Isolates come from the Democratic Republic of the Congo and Kerala, India.
Caenorhabditis sinica, is a species of Caenorhabditis nematodes, belonging to the Elegans super-group and Elegans group within the genus. It is closely related to several species isolated from the lands adjacent to the Indian and Pacific Oceans, as well as to C. briggsae and C. nigoni. The species was known as “C. sp. 5” prior to 2014. C. sinica is known for having very high genetic diversity in its genome. Like other Caenorhabditis species, C. sinica is a ~1mm long roundworm with a transparent cuticle and that eats bacteria. Wild isolate strains of C. sinica have been collected from various rotting plant tissue substrates in temperate and tropical regions throughout China since its initial isolation in 2005.
Oscheius is a genus of nematode.
Oscheius tipulae is a species of nematodes, described in association of the leatherjacket, the larva of Tipula paludosa.
Warwick Llewellyn Nicholas (1926–2010) was an Australian zoologist known as a pioneer in the field of nematology. He was a foundational member of the Australian Society for Parasitology (ASP) and in 1964, he organised the first ASP meeting. He became President of the Society in 1978, before being an elected Fellow from 1979.
