Chitinophagaceae

Chitinophagaceae
Scientific classification
Domain:	Bacteria
Kingdom:	Pseudomonadati
Phylum:	Bacteroidota
Class:	Chitinophagia Munoz et al. 2017 [1]
Order:	Chitinophagales Munoz et al. 2017 [2]
Family:	Chitinophagaceae Kämpfer et al. 2011 [3]
Genera [4] [5]
See text

Chitinophagaceae is an aerobic or facultatively anaerobic and rod-shaped family of bacteria in the phylum Bacteroidota. ^{[4] [5] [6] [7] [8]}

Genera

• Agriterribacter Lee and Whang 2020
• Arachidicoccus Madhaiyan et al. 2015
• Arvibacter Chaudhary and Kim 2016
• Aurantisolimonas Liu et al. 2018
• Chitinophaga Sangkhobol and Skerman 1981
• Cnuella Zhao et al. 2014
• Compostibacter Siddiqi et al. 2016
• Deminuibacter Wang et al. 2019
• Dinghuibacter Lv et al. 2016
• Edaphobaculum Cao et al. 2017
• "Edaphocola" Choi et al. 2019
• Ferruginibacter Lim et al. 2009
• Filimonas Shiratori et al. 2009
• Flaviaesturariibacter Kang et al. 2015
• Flavihumibacter Zhang et al. 2010
• Flavipsychrobacter Liu et al. 2018
• Flavisolibacter Yoon and Im 2007
• Flavitalea Wang et al. 2011
• "Foetidibacter" Pu et al. 2021
• "Ginsengibacter" Siddiqi et al. 2021
• Gynurincola Zhang et al. 2019
• Haoranjiania Zhang et al. 2016
• Heliimonas Leandro et al. 2013
• Hydrobacter Eder et al. 2015
• Hydrotalea Kämpfer et al. 2011
• "Ilyomonas" Chhetri et al. 2019
• Lacibacter Qu et al. 2009
• Mucibacter Kim et al. 2020
• Nemorincola Chaudhary et al. 2018
• Niabella Kim et al. 2007
• Niastella Weon et al. 2006
• Niveitalea Hyeon et al. 2017
• Panacibacter Siddiqi et al. 2016
• Paracnuella Wang et al. 2019
• Parafilimonas Kim et al. 2014
• Paraflavitalea Heo et al. 2020
• Parapseudoflavitalea Lawson et al. 2020
• Parasediminibacterium Kang et al. 2016
• Parasegetibacter Zhang et al. 2009
• Phnomibacter Siddiqi et al. 2021
• Pseudobacter Siddiqi and Im 2016
• "Pseudocnuella" Maeng et al. 2021
• Pseudoflavitalea Kim et al. 2016
• Puia Lv et al. 2017
• Rurimicrobium Dahal et al. 2017
• Sediminibacterium Qu and Yuan 2008
• Segetibacter An et al. 2007
• "Solibius" Kim et al. 2010
• Taibaiella Zhang et al. 2013
• Terrimonas Xie and Yokota 2006
• Thermoflavifilum Anders et al. 2014

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature ^[4] and the phylogeny is based on whole-genome sequences. ^{[9] [a]}

	Chitinophagia Thermoflavifilum Chitinophaga Taibaiella Arachidicoccus Segetibacter Parafilimonas Hydrotalea Filimonas Sediminibacterium Hydrobacter Flavihumibacter Niastella Cnuella Flavisolibacter Terrimonas Niabella outgroup Sphingobacteriia

Notes

1. Agriterribacter, Arvibacter, Aurantisolimonas, Compostibacter, Deminuibacter, Dinghuibacter, Edaphobaculum, Ferruginibacter, Flaviaesturariibacter, Flavipsychrobacter, Flavitalea, Gynurincola, Haoranjiania, Heliimonas, Lacibacter, Mucibacter, Nemorincola, Niveitalea, Panacibacter, Paracnuella, Paraflavitalea, Parapseudoflavitalea, Parasediminibacterium, Parasegetibacter, Phnomibacter, Pseudobacter, Pseudoflavitalea, Puia, and Rurimicrobium are not included in this phylogenetic tree.

References

1. Munoz R, Rossello-Mora R, Amann R (2016). "Revised phylogeny of Bacteroidetes and proposal of sixteen new taxa and two new combinations including Rhodothermaeota phyl. nov". Syst Appl Microbiol. 39 (5): 281–296. Bibcode:2016SyApM..39..281M. doi:10.1016/j.syapm.2016.04.004. PMID   27287844.
2. Munoz R, Rossello-Mora R, Amann R (2016). "Corrigendum to "Revised phylogeny of Bacteroidetes and proposal of sixteen new taxa and two new combinations including Rhodothermaeota phyl. nov." [Syst. Appl. Microbiol. 39 (5) (2016) 281–296]". Syst Appl Microbiol. 39 (7): 491–492. Bibcode:2016SyApM..39..491M. doi:10.1016/j.syapm.2016.08.006. PMID   27639921.
3. Kämpfer P, Lodders N, Falsen E (2011). "Hydrotalea flava gen. nov., sp. nov., a new member of the phylum Bacteroidetes and allocation of the genera Chitinophaga, Sediminibacterium, Lacibacter, Flavihumibacter, Flavisolibacter, Niabella, Niastella, Segetibacter, Parasegetibacter, Terrimonas, Ferruginibacter, Filimonas and Hydrotalea to the family Chitinophagaceae fam. nov". Int J Syst Evol Microbiol. 61 (Pt 3): 518–523. doi: 10.1099/ijs.0.023002-0 . PMID   20382796.
4. Euzéby JP, Parte AC. "Chitinophagales". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved June 25, 2021.
5. Parker, Charles Thomas; Taylor, Dorothea; Garrity, George M (8 October 2009). Parker, Charles Thomas; Garrity, George M (eds.). "Taxonomic Abstract for the families". NamesforLife, LLC. doi:10.1601/tx.14400.{{cite journal}}: Cite journal requires |journal= (help)
6. "Chitinophagaceae". www.uniprot.org.
7. Krieg, Noel R.; Ludwig, Wolfgang; Whitman, William B.; Hedlund, Brian P.; Paster, Bruce J.; Staley, James T.; Ward, Naomi; Brown, Daniel (2011). Bergey's Manual of Systematic Bacteriology: Volume 4: The Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyoglomi, Gemmatimonadetes, Lentisphaerae, Verrucomicrobia, Chlamydiae, and Planctomycetes. Springer Science & Business Media. ISBN   9780387685724.
8. Ralebitso-Senior, T. Komang (2018). Forensic Ecogenomics: The Application of Microbial Ecology Analyses in Forensic Contexts. Academic Press. ISBN   9780128096093.
9. García-López M, Meier-Kolthoff JP, Tindall BJ, Gronow S, Woyke T, Kyrpides NC, Hahnke RL, Göker M (2019). "Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes". Front Microbiol. 10: 2083. doi: 10.3389/fmicb.2019.02083 . PMC   6767994 . PMID   31608019.