Cochliopodium

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Cochliopodium
Ameba roda Cochliopodium.jpg
Amoeba of the genus Cochliopodium. Phase contrast microscopy. In the center, three digestive vacuoles with algae are visible, and a dark cell nucleus is located just below. The cytoplasm contains a lot of light contractile vacuoles, you can notice yellowish crystals.
Scientific classification
Domain:
Phylum:
Class:
Order:
Family:
Genus:
Cochliopodium

Hertwig & Lesser 1874
Type species
Cochliopodium pellucidum
Hertwig & Lesser 1874

Cochliopodium is a Himatismenida genus. [1]

It has been found in eyewash stations. [2]

It includes:

Recombination and meiosis

The Cochliopodium genome includes genes whose functions are employed in the process of genetic recombination suggesting the possibility of a sexual stage. [7] The genome sequence of Cochliopodium minus contains a complete set of genes necessary for meiosis a key stage of sexual reproduction. [8]

Contents

Related Research Articles

<span class="mw-page-title-main">Amoebozoa</span> Phylum of protozoans

Amoebozoa is a major taxonomic group containing about 2,400 described species of amoeboid protists, often possessing blunt, fingerlike, lobose pseudopods and tubular mitochondrial cristae. In traditional classification schemes, Amoebozoa is usually ranked as a phylum within either the kingdom Protista or the kingdom Protozoa. In the classification favored by the International Society of Protistologists, it is retained as an unranked "supergroup" within Eukaryota. Molecular genetic analysis supports Amoebozoa as a monophyletic clade. Modern studies of eukaryotic phylogenetic trees identify it as the sister group to Opisthokonta, another major clade which contains both fungi and animals as well as several other clades comprising some 300 species of unicellular eukaryotes. Amoebozoa and Opisthokonta are sometimes grouped together in a high-level taxon, named Amorphea. Amoebozoa includes many of the best-known amoeboid organisms, such as Chaos, Entamoeba, Pelomyxa and the genus Amoeba itself. Species of Amoebozoa may be either shelled (testate) or naked, and cells may possess flagella. Free-living species are common in both salt and freshwater as well as soil, moss and leaf litter. Some live as parasites or symbionts of other organisms, and some are known to cause disease in humans and other organisms.

<span class="mw-page-title-main">Lobosa</span> Phylum of protozoans

Lobosa is a taxonomic group of amoebae in the phylum Amoebozoa. Most lobosans possess broad, bluntly rounded pseudopods, although one genus in the group, the recently discovered Sapocribrum, has slender and threadlike (filose) pseudopodia. In current classification schemes, Lobosa is a subphylum, composed mainly of amoebae that have lobose pseudopods but lack cilia or flagella.

<span class="mw-page-title-main">Amorphea</span> Group including fungi, animals and various protozoa

Amorphea is a taxonomic supergroup that includes the basal Amoebozoa and Obazoa. That latter contains the Opisthokonta, which includes the Fungi, Animals and the Choanomonada, or Choanoflagellates. The taxonomic affinities of the members of this clade were originally described and proposed by Thomas Cavalier-Smith in 2002.

The Vannellidae are a family of Amoebozoa, which are found in soil, fresh- and salt water. The most common genus is Vannella.

<span class="mw-page-title-main">Tubulinea</span> Class of protozoans

The Tubulinea are a major grouping of Amoebozoa, including most of the more familiar amoebae genera like Amoeba, Arcella, Difflugia and Hartmannella.

<span class="mw-page-title-main">Discosea</span> Class of amoebae

Discosea is a class of Amoebozoa, consisting of naked amoebae with a flattened, discoid body shape. Members of the group do not produce tubular or subcylindrical pseudopodia, like amoebae of the class Tubulinea. When a discosean is in motion, a transparent layer called hyaloplasm forms at the leading edge of the cell. In some discoseans, short "subpseudopodia" may be extended from this hyaloplasm, but the granular contents of the cell do not flow into these, as in true pseudopodia. Discosean amoebae lack hard shells, but some, like Cochliopodium and Korotnevella secrete intricate organic scales which may cover the upper (dorsal) surface of the cell. No species have flagella or flagellated stages of life.

<span class="mw-page-title-main">Himatismenida</span> Order of protozoans

Himatismenida is an Amoebozoa order, in the class Discosea, along with Glycostylida and Dermamoebida. It contains species such as Cochliopodium gallicum.

<span class="mw-page-title-main">Thecamoebidae</span> Family of amoebae

Thecamoebidae is an Amoebozoa family.

<span class="mw-page-title-main">Conosa</span> Phylum of protozoans

Conosa is a grouping of Amoebozoa. It is subdivided into three groups: Archamoeba, Variosea and Mycetozoa.

Leptomyxa is a free-living genus of lobose naked multinucleate amoebae in the order Leptomyxida that inhabits freshwater, soil and mosses. It is very closely related to the genus Rhizamoeba, and some species have been moved between the two genera due to molecular data.

<i>Rhizamoeba</i> Genus of marine lobose amoebae

Rhizamoeba is a small genus of free-living marine naked lobose amoebae in the monotypic family Rhizamoebidae in the order Leptomyxida. It is most closely related to Leptomyxa and Flabellula, and some species have been moved to Leptomyxa due to molecular data.

<span class="mw-page-title-main">Testate amoebae</span> Group of amoebae with shells

Testate amoebae are a polyphyletic group of unicellular amoeboid protists, which differ from naked amoebae in the presence of a test that partially encloses the cell, with an aperture from which the pseudopodia emerge, that provides the amoeba with shelter from predators and environmental conditions.

<span class="mw-page-title-main">Myzozoa</span> Group of single-celled organisms

Myzozoa is a grouping of specific phyla within Alveolata, that either feed through myzocytosis, or were ancestrally capable of feeding through myzocytosis.

<i>Trichosphaerium</i> Genus of amoebae

Trichosphaerium is a genus of amoebozoan protists that present extraordinary morphological transformations, both in size and shape, during their life cycle. They can present a test that may or may not be covered in spicules. They are related to the family Microcoryciidae, which contains other amoebae with tests, within the clade Corycidia of the phylum Amoebozoa.

<span class="mw-page-title-main">Amoeba</span> Cellular body type

An amoeba, often called an amoeboid, is a type of cell or unicellular organism with the ability to alter its shape, primarily by extending and retracting pseudopods. Amoebae do not form a single taxonomic group; instead, they are found in every major lineage of eukaryotic organisms. Amoeboid cells occur not only among the protozoa, but also in fungi, algae, and animals.

Cutosea is a small group of marine amoeboid protists proposed in 2016. It is a monotypic class of Amoebozoa containing the order Squamocutida. Cutosean organisms are characterized by a cell coat of microscales separated from the cell membrane. Four genera, Armaparvus, Idionectes, Sapocribrum and Squamamoeba, belong to this group, distributed in three families.

<i>Nebela</i> Genus of testate amoebae

Nebela is a diverse genus of testate amoebae of cosmopolitan distribution, belonging to the family Hyalospheniidae. They are "prey agglutinated" or "kleptosquamic" organisms, meaning they take the inorganic plates from their prey to construct their test.

<i>Planocarina</i> Genus of testate amoebae

Planocarina is a genus of arcellinid testate amoebae belonging to the family Hyalospheniidae. It was created in 2016 to agglutinate a clade of species that were previously assigned to the paraphyletic genus Nebela. All species of Planocarina have a compressed keel surrounding the posterior part of their shell. It is the sister group of Alabasta.

<span class="mw-page-title-main">Evosea</span> Group of amoebae

Evosea is a diverse clade of amoeboid protists discovered through molecular analyses. Along with Tubulinea and Discosea, Evosea is one of the three major groups within Amoebozoa, an important clade of eukaryotic organisms. It contains unicellular organisms that display a wide variety of life cycles and cell shapes, including amoebae, flagellates and different kinds of slime molds.

<span class="mw-page-title-main">Corycidia</span> Group of amoebae

Corycidia is a clade of amoeboid protists within the eukaryotic supergroup Amoebozoa. It contains all amoebae of the families Microcoryciidae, which was previously regarded as Arcellinida, and Trichosphaeriidae, which contains the sole genus Trichosphaerium.

References

  1. Kudryavtsev A (July 2006). ""Minute" species of Cochliopodium (Himatismenida): Description of three new fresh- and brackish-water species with a new diagnosis for Cochliopodium minus Page, 1976". Eur. J. Protistol. 42 (2): 77–89. doi:10.1016/j.ejop.2005.12.002. PMID   17070753.
  2. Paszko-Kolva C, Yamamoto H, Shahamat M, Sawyer TK, Morris G, Colwell RR (January 1991). "Isolation of amoebae and Pseudomonas and Legionella spp. from eyewash stations". Appl. Environ. Microbiol. 57 (1): 163–7. Bibcode:1991ApEnM..57..163P. doi:10.1128/aem.57.1.163-167.1991. PMC   182678 . PMID   2036003.
  3. Srikanth S, Berk SG (October 1993). "Stimulatory effect of cooling tower biocides on amoebae". Appl. Environ. Microbiol. 59 (10): 3245–9. Bibcode:1993ApEnM..59.3245S. doi:10.1128/aem.59.10.3245-3249.1993. PMC   182444 . PMID   8250551.
  4. Hülsmann N, Galil BS (November 2001). "The effects of freshwater flushing on marine heterotrophic protists--implications for ballast water management". Mar. Pollut. Bull. 42 (11): 1082–6. Bibcode:2001MarPB..42.1082H. doi:10.1016/S0025-326X(01)00087-X. PMID   11763219.
  5. Kudryavtsev A, Smirnov A (March 2006). "Cochliopodium gallicum n. sp. (Himatismenida), an amoeba bearing unique scales, from cyanobacterial mats in the Camargue (France)". Eur. J. Protistol. 42 (1): 3–7. doi:10.1016/j.ejop.2005.08.001. PMID   17070746.
  6. Dyková I, Lom J, Machácková B (November 1998). "Cochliopodium minus, a scale-bearing amoeba isolated from organs of perch Perca fluviatilis". Dis. Aquat. Org. 34 (3): 205–10. doi: 10.3354/dao034205 . PMID   9925426.
  7. Wood, F. C.; Heidari, A.; Tekle, Y. I. (2017). "Genetic Evidence for Sexuality in Cochliopodium (Amoebozoa)". The Journal of Heredity. 108 (7): 769–779. doi:10.1093/jhered/esx078. PMC   5892394 . PMID   29036297.
  8. Tekle, Y. I.; Wang, F.; Tran, H.; Hayes, T. D.; Ryan, J. F. (2022). "The draft genome of Cochliopodium minus reveals a complete meiosis toolkit and provides insight into the evolution of sexual mechanisms in Amoebozoa". Scientific Reports. 12 (1): 9841. Bibcode:2022NatSR..12.9841T. doi:10.1038/s41598-022-14131-y. PMC   9198077 . PMID   35701521.