Conosa | |
---|---|
Dictyostelium discoideum | |
Scientific classification | |
Domain: | Eukaryota |
Phylum: | Amoebozoa |
Clade: | Evosea |
Subphylum: | Conosa Cavalier-Smith, 1998 |
Infraphyla | |
Conosa is a grouping of Amoebozoa. It is subdivided into three groups: Archamoeba, Variosea and Mycetozoa. [1] [2]
In some classifications, the mycetozoan Myxogastria and Dictyostelia are united in Macromycetozoa (= Eumycetozoa). [3]
Conosa includes the species Dictyostelium discoideum, a social amoeba, and Entamoeba histolytica , a human pathogen, among others. [4]
Conosa are morphologically defined by a conical microtubular structure, [1] [5] [6] and have been found to be monophyletic. [2] [5]
The Conosa group was first proposed by Thomas Cavalier-Smith in 1998 as a subphylum of Amoebozoa. [1] Cavalier-Smith originally separated this group into 2 infraphyla: Archamoebae and Mycetozoa. [1] Notable characteristics of these two groups are that Mycetozoa are free living, while Archamoebae are amitochondrial. [4] This clade is morphologically defined by their complex microtubular skeleton that forms a partial or complete cone. [5] [6] They have a monolayer of microtubules that surround at least some of the anterior end of the cell and diverge into a cone shape towards the nucleus at the posterior end. [1] [6] This cone of microtubules usually starts at a single centriole and extends towards the nucleus. [1] They also have a lateral microtubular ribbon towards the cell surface. [1] Conosa can exist as aggregate aerobes with mitochondria and also as solitary anaerobes with no mitochondria or peroxisomes. [1] There are mitochondriate and amitochondriate members, as well as free living and parasitic representatives. [2] Mitochondria reduction could be a result of transitions to a parasitic lifestyle, [2] as is seen in the amitochondral human parasite Entamoeba histolytica. [4]
Conosa are separated from Lobosa, the other Amoebozoa subphylum, by morphological characteristics and genomic differences. Conosa have both amoeboid and flagellate forms or stages and more pointed pseudopodia with branches. In contrast, Lobosa are entirely amoeboid with broad pseudopodia. [5] Conosa's flagella are artifacts of their ancestral conditions and are seen in trophic and swarm cell phases. [5] Flagellate Conosa have a cone-shaped microtubular skeleton, and non-ciliate forms contain extensive microtubes in the cytoplasm, both of which are not seen in Lobosa. [5]
While morphological characteristics like pseudopodia and body shape, flagella, and cytoplasm properties have not been regarded as convincing taxonomic suggestions, [2] emerging sequencing data is being used to support Conosa’s monophyly. A study using several hundred phylogenetic markers of 30 species found Conosa to be monophyletic as representatives of Mycetozoa, Entamoebidae, and Pelobionta grouped together using several amino acid sequencing analysis methods. [2] The monophyly of Conosa and the Archamoebea infraphyla was also supported by cDNA sequencing of 17 Amoebozoans. [5] However, the monophyly of Conosa is not entirely supported. For example, another study using 7 protein coding genes did not find Conosa to be monophyletic due to members of Lobosa sharing a phylogenetic branch with the Conosan lineage Variosea. [6] This same study did find all three Conosan lineages to be monophyletic. [6]
The last common ancestor of Conosa was likely an aerobic protist with anterior and recurrent flagellum. [6] It likely had mitochondria, while mitochondrial reduction has resulted in both mitochondriate and amitochondriate members today. [2] The ancestral biflagellate condition is seen in some extant Conosa forms. [5] In some Archamoebae, the posterior flagella and its related cytoskeleton has been lost, and others have lost the entire flagellar system. [6] The conical microtubular skeleton convergently evolved in Archamoebae and Variosea, but not in Mycetozoa. [5] A study of the complete proteomic content of 23 eukaryotic genomes found that representative members of Mycetozoa and Archamoebae do share a common ancestor, and their divergence occurred almost as long ago as the split of fungi and animals. [4]
A pseudopod or pseudopodium is a temporary arm-like projection of a eukaryotic cell membrane that is emerged in the direction of movement. Filled with cytoplasm, pseudopodia primarily consist of actin filaments and may also contain microtubules and intermediate filaments. Pseudopods are used for motility and ingestion. They are often found in amoebas.
Amoebozoa is a major taxonomic group containing about 2,400 described species of amoeboid protists, often possessing blunt, fingerlike, lobose pseudopods and tubular mitochondrial cristae. In traditional classification schemes, Amoebozoa is usually ranked as a phylum within either the kingdom Protista or the kingdom Protozoa. In the classification favored by the International Society of Protistologists, it is retained as an unranked "supergroup" within Eukaryota. Molecular genetic analysis supports Amoebozoa as a monophyletic clade. Modern studies of eukaryotic phylogenetic trees identify it as the sister group to Opisthokonta, another major clade which contains both fungi and animals as well as several other clades comprising some 300 species of unicellular eukaryotes. Amoebozoa and Opisthokonta are sometimes grouped together in a high-level taxon, named Amorphea. Amoebozoa includes many of the best-known amoeboid organisms, such as Chaos, Entamoeba, Pelomyxa and the genus Amoeba itself. Species of Amoebozoa may be either shelled (testate) or naked, and cells may possess flagella. Free-living species are common in both salt and freshwater as well as soil, moss and leaf litter. Some live as parasites or symbionts of other organisms, and some are known to cause disease in humans and other organisms.
In biology, Archezoa is a term that has been introduced by several authors to refer to a group of organisms. Authors include Josef Anton Maximilian Perty, Ernst Haeckel and in the 20th century by Thomas Cavalier-Smith in his classification system. Each author used the name to refer to different arrays of organisms. This reuse by later authors of the same taxon name for different groups of organisms is widely criticized in taxonomy because the inclusion of the name in a sentence does not make sense unless the particular usage is specified. Nonetheless, all uses of 'Archezoa' are now obsolete.
The Rhizaria are a diverse and species-rich supergroup of mostly unicellular eukaryotes. Except for the Chlorarachniophytes and three species in the genus Paulinella in the phylum Cercozoa, they are all non-photosynthetic, but many foraminifera and radiolaria have a symbiotic relationship with unicellular algae. A multicellular form, Guttulinopsis vulgaris, a cellular slime mold, has been described. This group was used by Cavalier-Smith in 2002, although the term "Rhizaria" had been long used for clades within the currently recognized taxon.
The metamonads are a large group of flagellate amitochondriate microscopic eukaryotes. Their composition is not entirely settled, but they include the retortamonads, diplomonads, and possibly the parabasalids and oxymonads as well. These four groups are all anaerobic, occurring mostly as symbiotes or parasites of animals, as is the case with Giardia lamblia which causes diarrhea in mammals.
Pelomyxa is a genus of giant flagellar amoebae, usually 500–800 μm but occasionally up to 5 mm in length, found in anaerobic or microaerobic bottom sediments of stagnant freshwater ponds or slow-moving streams.
Lobosa is a taxonomic group of amoebae in the phylum Amoebozoa. Most lobosans possess broad, bluntly rounded pseudopods, although one genus in the group, the recently discovered Sapocribrum, has slender and threadlike (filose) pseudopodia. In current classification schemes, Lobosa is a subphylum, composed mainly of amoebae that have lobose pseudopods but lack cilia or flagella.
Amorphea is a taxonomic supergroup that includes the basal Amoebozoa and Obazoa. That latter contains the Opisthokonta, which includes the Fungi, Animals and the Choanomonada, or Choanoflagellates. The taxonomic affinities of the members of this clade were originally described and proposed by Thomas Cavalier-Smith in 2002.
The Archamoebae are a group of protists originally thought to have evolved before the acquisition of mitochondria by eukaryotes. They include genera that are internal parasites or commensals of animals. A few species are human pathogens, causing diseases such as amoebic dysentery. The other genera of archamoebae live in freshwater habitats and are unusual among amoebae in possessing flagella. Most have a single nucleus and flagellum, but the giant amoeba Pelomyxa has many of each.
Eumycetozoa, or true slime molds, is a diverse group of protists that behave as slime molds and develop fruiting bodies, either as sorocarps or as sporocarps. It is a monophyletic group or clade within the phylum Amoebozoa that contains the myxogastrids, dictyostelids and protosporangiids.
Thecofilosea is a class of unicellular testate amoebae belonging to the phylum Cercozoa. They are amoeboflagellates, organisms with flagella and pseudopodia, distinguished from other cercozoa by their scale-lacking test composed of organic material. They are closely related to the Imbricatea, a group of testate amoebae with tests composed of inorganic silica scales.
Mastigamoeba is a genus of pelobionts, and treated by some as members of the Archamoebae group of protists. Mastigamoeba are characterized as anaerobic, amitochondriate organisms that are polymorphic. Their dominant life cycle stage is as an amoeboid flagellate. Species are typically free living, though endobiotic species have been described.
Trichosphaerium is a genus of amoebozoan protists that present extraordinary morphological transformations, both in size and shape, during their life cycle. They can present a test that may or may not be covered in spicules. They are related to the family Microcoryciidae, which contains other amoebae with tests, within the clade Corycidia of the phylum Amoebozoa.
Collodictyon is a genus of single-celled, omnivorous eukaryotes belonging to the collodictyonids, also known as diphylleids. Due to their mix of cellular components, Collodictyonids do not belong to any well-known kingdom-level grouping of that domain and this makes them distinctive from other families. Recent research places them in a new 'supergroup' together with rigifilids and Mantamonas, with the so-far informal name 'CRuMs'.
An amoeba, often called an amoeboid, is a type of cell or unicellular organism with the ability to alter its shape, primarily by extending and retracting pseudopods. Amoebae do not form a single taxonomic group; instead, they are found in every major lineage of eukaryotic organisms. Amoeboid cells occur not only among the protozoa, but also in fungi, algae, and animals.
Varisulca was a proposed basal Podiate taxon. It encompassed several lineages of heterotrophic protists, most notably the ancyromonads (planomonads), collodictyonids (diphylleids), rigifilids and mantamonadids. Recent evidence suggests that the latter three are closely related to each other, forming a clade called CRuMs, but that this is unlikely to be specifically related to ancyromonads.
Cutosea is a small group of marine amoeboid protists proposed in 2016. It is a monotypic class of Amoebozoa containing the order Squamocutida. Cutosean organisms are characterized by a cell coat of microscales separated from the cell membrane. Four genera, Armaparvus, Idionectes, Sapocribrum and Squamamoeba, belong to this group, distributed in three families.
Evosea is a diverse clade of amoeboid protists discovered through molecular analyses. Along with Tubulinea and Discosea, Evosea is one of the three major groups within Amoebozoa, an important clade of eukaryotic organisms. It contains unicellular organisms that display a wide variety of life cycles and cell shapes, including amoebae, flagellates and different kinds of slime molds.
An amoeboflagellate is any eukaryotic organism capable of behaving as an amoeba and as a flagellate at some point during their life cycle. Amoeboflagellates present both pseudopodia and at least one flagellum, often simultaneously.
Paratrimastix pyriformis is a species of free-living (non-parasitic) anaerobic freshwater bacteriovorous flagellated protists formerly known as Trimastix pyriformis and Tetramitus pyriformis.