Provora

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Provora
Outline drawing of Ubysseya fretuma.svg
Ubysseya fretuma, a nibblerid predator
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Eukaryota
Clade: Diaphoretickes
Clade: Provora
Tikhonenkov et al. 2022 [1]
Phyla

Provora is a proposed supergroup of eukaryotes made up of predatory microbes, "devouring voracious protists". It was reported that ten strains were isolated and cultured in 2022. They are predators of other microorganisms. Their discovery was very delayed, compared to other microorganisms in their environments, due to their rarity. Their 18S ribosomal RNA is very different from that of other eukaryotes consistent with their being a lineage without close relatives; this was confirmed by phylogenomic analyses of datasets of several hundred proteins, so they were taxonomically placed in a separate supergroup. [1] [2]

Contents

Evolution

External relationships

The supergroup Provora is composed of microbes that form an ancient lineage of eukaryotes. The initial phylogenetic analyses recovered a position within the larger supergroup Diaphoretickes, particularly as sister to the protist groups TSAR and Haptista. [1] However, a 2024 phylogenomic analysis recovered Provora as part of a novel lineage of eukaryotes, specifically as the sister group to a clade containing Hemimastigophora and the species Meteora sporadica . [3] Either position is reflected in the biology of Provora: their extrusomes are similar to those found in Hemimastigophora, while other cellular features most closely resemble those found in TSAR and Haptista, such as flagellar vanes, the architecture of the flagellar apparatus, and the presence of cortical alveoli below the cell membrane. [4] The following cladogram represents the two alternative evolutionary positions:

Eukaryotes

Internal relationships

The phylogenetic relationships between the eight described species of Provora is the following: [1] [4]

Related Research Articles

<span class="mw-page-title-main">Opisthokont</span> Group of eukaryotes which includes animals and fungi, among other groups

The opisthokonts are a broad group of eukaryotes, including both the animal and fungus kingdoms. The opisthokonts, previously called the "Fungi/Metazoa group", are generally recognized as a clade. Opisthokonts together with Apusomonadida and Breviata comprise the larger clade Obazoa.

<span class="mw-page-title-main">Rhizaria</span> Infrakingdom of protists

The Rhizaria are a diverse and species-rich supergroup of mostly unicellular eukaryotes. Except for the Chlorarachniophytes and three species in the genus Paulinella in the phylum Cercozoa, they are all non-photosynthetic, but many Foraminifera and Radiolaria have a symbiotic relationship with unicellular algae. A multicellular form, Guttulinopsis vulgaris, a cellular slime mold, has been described. This group was used by Cavalier-Smith in 2002, although the term "Rhizaria" had been long used for clades within the currently recognized taxon.

<span class="mw-page-title-main">Hemimastigophora</span> Group of single-celled organisms

Hemimastigophora is a group of single-celled eukaryotic organisms including the Spironematellidae, first identified in 1988, and the Paramastigidae. Over the next 30 years, different authors proposed placing these organisms in various branches of the eukaryotes. In 2018 Lax et al. reported the first genetic information for Spironemidae, and suggest that they are from an ancient lineage of eukaryotes which constitute a separate clade from all other eukaryotic kingdoms. It may be related to the Telonemia.

<span class="mw-page-title-main">Archaeplastida</span> Clade of eukaryotes containing land plants and some algae

The Archaeplastida are a major group of eukaryotes, comprising the photoautotrophic red algae (Rhodophyta), green algae, land plants, and the minor group glaucophytes. It also includes the non-photosynthetic lineage Rhodelphidia, a predatorial (eukaryotrophic) flagellate that is sister to the Rhodophyta, and probably the microscopic picozoans. The Archaeplastida have chloroplasts that are surrounded by two membranes, suggesting that they were acquired directly through a single endosymbiosis event by phagocytosis of a cyanobacterium. All other groups which have chloroplasts, besides the amoeboid genus Paulinella, have chloroplasts surrounded by three or four membranes, suggesting they were acquired secondarily from red or green algae. Unlike red and green algae, glaucophytes have never been involved in secondary endosymbiosis events.

<span class="mw-page-title-main">Telonemia</span> Phylum of single-celled organisms

Telonemia is a phylum of microscopic eukaryotes commonly known as telonemids. They are unicellular free-living flagellates with a unique combination of cell structures, including a highly complex cytoskeleton unseen in other eukaryotes.

<span class="mw-page-title-main">Protist</span> Eukaryotes other than animals, plants or fungi

A protist or protoctist is any eukaryotic organism that is not an animal, land plant, or fungus. Protists do not form a natural group, or clade, but are a polyphyletic grouping of several independent clades that evolved from the last eukaryotic common ancestor.

<span class="mw-page-title-main">Phylum</span> High level taxonomic rank for organisms sharing a similar body plan

In biology, a phylum is a level of classification or taxonomic rank below kingdom and above class. Traditionally, in botany the term division has been used instead of phylum, although the International Code of Nomenclature for algae, fungi, and plants accepts the terms as equivalent. Depending on definitions, the animal kingdom Animalia contains about 31 phyla, the plant kingdom Plantae contains about 14 phyla, and the fungus kingdom Fungi contains about eight phyla. Current research in phylogenetics is uncovering the relationships among phyla within larger clades like Ecdysozoa and Embryophyta.

<span class="mw-page-title-main">SAR supergroup</span> Eukaryotes superphylum

SAR or Harosa is a highly diverse clade of eukaryotes, often considered a supergroup, that includes stramenopiles (heterokonts), alveolates, and rhizarians. It is a node-based taxon, including all descendants of the three groups' last common ancestor, and comprises most of the now-rejected Chromalveolata. Their sister group has been found to be telonemids, with which they make up the TSAR clade.

<span class="mw-page-title-main">Hacrobia</span> Group of algae

The cryptomonads-haptophytes assemblage is a proposed but disputed monophyletic grouping of unicellular eukaryotes that are not included in the SAR supergroup. Several alternative names have been used for the group, including Hacrobia ; CCTH ; and "Eukaryomonadae".

<span class="mw-page-title-main">Holozoa</span> Clade containing animals and some protists

Holozoa is a clade of organisms that includes animals and their closest single-celled relatives, but excludes fungi and all other organisms. Together they amount to more than 1.5 million species of purely heterotrophic organisms, including around 300 unicellular species. It consists of various subgroups, namely Metazoa and the protists Choanoflagellata, Filasterea, Pluriformea and Ichthyosporea. Along with fungi and some other groups, Holozoa is part of the Opisthokonta, a supergroup of eukaryotes. Choanofila was previously used as the name for a group similar in composition to Holozoa, but its usage is discouraged now because it excludes animals and is therefore paraphyletic.

<span class="mw-page-title-main">Cryptista</span> Clade of algae

Cryptista is a clade of alga-like eukaryotes. It is most likely related to Archaeplastida which includes plants and many algae, within the larger group Diaphoretickes.

<span class="mw-page-title-main">Haptista</span> Group of protists

Haptista is a proposed group of protists made up of centrohelids and haptophytes. Phylogenomic studies indicate that Haptista, together with Ancoracysta twista, forms a sister clade to the SAR+Telonemia supergroup, but it may also be sister to the Cryptista (+Archaeplastida). It is thus one of the earliest diverging Diaphoretickes.

Endohelea is a proposed clade of eukaryotes that are related to Archaeplastida and the SAR supergroup. They used to be considered heliozoans, but phylogenetically they belong to a group of microorganisms known as Cryptista.

Ancoracysta is a genus of eukaryotic microbes containing the species Ancoracysta twista, a predatory protist that appears to be related to Haptista.

<span class="mw-page-title-main">Pluriformea</span> Clade of unicellular organisms

Pluriformea is a proposed sibling clade of the Filozoa, and consists of Syssomonas multiformis and the Corallochytrea. Together with the Ichthyosporea and the Filozoa, they form the Holozoa.

<i>Meteora sporadica</i> Species of deep sea protist

Meteora sporadica is a mysterious free-living protozoan discovered in 2002 during sampling at a depth of 1,230 meters below sea level in the Sporades Basin, part of the Mediterranean Sea. So far it is the only species of the genus Meteora.

<span class="mw-page-title-main">Cortical alveolum</span> Cellular organelle found in protists

The cortical alveolum is a cellular organelle consisting of a vesicle located under the cytoplasmic membrane, to which they give support. The term "corticate" comes from an evolutionary hypothesis about the common origin of kingdoms Plantae and Chromista, because both kingdoms have cortical alveoli in at least one phylum. At least three protist lineages exhibit these structures: Telonemia, Alveolata and Glaucophyta.

A supergroup, in evolutionary biology, is a large group of organisms that share one common ancestor and have important defining characteristics. It is an informal, mostly arbitrary rank in biological taxonomy that is often greater than phylum or kingdom, although some supergroups are also treated as phyla.

<i>Syssomonas</i> Genus of protists

Syssomonas is a monotypic genus of unicellular flagellated protists containing the species Syssomonas multiformis. It is a member of Pluriformea inside the lineage of Holozoa, a clade containing animals and their closest protistan relatives. It lives in freshwater habitats. It has a complex life cycle that includes unicellular amoeboid and flagellated phases, as well as multicellular aggregates, depending on the growth medium and nutritional state.

<i>Ubysseya</i> Genus of eukaryotic microbes

Ubysseya is a genus of eukaryotic microbes containing the species Ubysseya fretuma, a predatory protist in the clade Provora. The species was discovered in 2022 based on specimens collected from sea water samples in the Strait of Georgia, Canada, at a depth of 220 meters.

References

  1. 1 2 3 4 Tikhonenkov, Denis V.; Mikhailov, Kirill V.; Gawryluk, Ryan M. R.; Belyaev, Artem O.; Mathur, Varsha; Karpov, Sergey A.; Zagumyonnyi, Dmitry G.; Borodina, Anastasia S.; Prokina, Kristina I.; Mylnikov, Alexander P.; Aleoshin, Vladimir V.; Keeling, Patrick J. (7 December 2022). "Microbial predators form a new supergroup of eukaryotes". Nature. 612 (7941): 714–719. Bibcode:2022Natur.612..714T. doi:10.1038/s41586-022-05511-5. PMID   36477531. S2CID   254436650.
  2. Tikhonenkov, Denis V.; Mikhailov, Kirill V.; Gawryluk, Ryan M. R.; Keeling, Patrick J. (7 August 2023). "Provora". Current biology. 33 (15): R790 –R791. doi:10.1016/j.cub.2023.06.004.
  3. Eglit, Yana; Shiratori, Takashi; Jerlström-Hultqvist, Jon; Williamson, Kelsey; Roger, Andrew J.; Ishida, Ken-Ichiro; Simpson, Alastair G.B. (22 January 2024). "Meteora sporadica, a protist with incredible cell architecture, is related to Hemimastigophora". Current Biology. 34 (2): 451–459. Bibcode:2024CBio...34E.451E. doi:10.1016/j.cub.2023.12.032. PMID   38262350.
  4. 1 2 Belyaev, Artem O.; Karpov, Sergey A.; Keeling, Patrick J.; Tikhonenkov, Denis V. (18 December 2024). "The nature of 'jaws': a new predatory representative of Provora and the ultrastructure of nibbling protists". Open Biology. 14 (12): 240158. doi: 10.1098/rsob.240158 .