Bikonts Temporal range: | |
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A radiolarian | |
Scientific classification | |
Domain: | Eukaryota |
(unranked): | Bikonta Cavalier-Smith, 1993 |
Subgroups | |
Synonyms | |
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A bikont ("two flagella") is any of the eukaryotic organisms classified in the group Bikonta. Many single-celled and multi-celled organisms are members of the group, and these, as well as the presumed ancestor, have two flagella. [1]
Another shared trait of bikonts is the fusion of two genes into a single unit: the genes for thymidylate synthase (TS) and dihydrofolate reductase (DHFR) encode a single protein with two functions. [2]
The genes are separately translated in unikonts.
Some research suggests that a unikont (a eukaryotic cell with a single flagellum) was the ancestor of opisthokonts (Animals, Fungi, and related forms) and Amoebozoa, and a bikont was the ancestor of Archaeplastida (Plants and relatives), Excavata, Rhizaria, and Chromalveolata. Cavalier-Smith has suggested that Apusozoa, which are typically considered incertae sedis , are in fact bikonts.
Relationships within the bikonts are not yet clear. Cavalier-Smith has grouped the Excavata and Rhizaria into the Cabozoa and the Archaeplastida and Chromalveolata into the Corticata, but at least one other study has suggested that the Rhizaria and Chromalveolata form a clade. [3]
An alternative to the Unikont–Bikont division was suggested by Derelle et al. in 2015, [4] where they proposed the acronyms Opimoda–Diphoda respectively, as substitutes to the older terms. The name Diphoda is formed from the letters of DIscoba and diaPHOretickes (shown in capitals). [suggested singular forms are Opneme-Dipheme respectively]
A "classical" cladogram (data from 2012, 2015) is: [5] [6]
Eukaryotes |
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However, a cladogram (data from 2015, 2016) with the root in Excavata is [4] [7] [8]
Eukaryotes |
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The corticates correspond roughly to the bikonts. While Haptophyta, Cryptophyta, Glaucophyta, Rhodophyta, the SAR supergroup and viridiplantae are usually considered monophyletic, Archaeplastida may be paraphyletic, and the mutual relationships between these phyla are still to be fully resolved.
Recent reconstructions placed Archaeplastida and Hacrobia together in an "HA supergroup" or "AH supergroup", which was a sister clade to the SAR supergroup within the SAR/HA supergroup. However, this seems to have fallen out of favor as the monophyly of hacrobia has come under dispute.
The centrohelids or centroheliozoa are a large group of heliozoan protists. They include both mobile and sessile forms, found in freshwater and marine environments, especially at some depth.
Chromista is a proposed but polyphyletic biological kingdom consisting of single-celled and multicellular eukaryotic species that share similar features in their photosynthetic organelles (plastids). It includes all eukaryotes whose plastids contain chlorophyll c and are surrounded by four membranes. If the ancestor already possessed chloroplasts derived by endosymbiosis from red algae, all non-photosynthetic Chromista have secondarily lost the ability to photosynthesise. Its members might have arisen independently as separate evolutionary groups from the last eukaryotic common ancestor.
The Rhizaria are a diverse and species-rich supergroup of mostly unicellular eukaryotes. Except for the Chlorarachniophytes and three species in the genus Paulinella in the phylum Cercozoa, they are all non-photosynthethic, but many foraminifera and radiolaria have a symbiotic relationship with unicellular algae. A multicellular form, Guttulinopsis vulgaris, a cellular slime mold, has been described. This group was used by Cavalier-Smith in 2002, although the term "Rhizaria" had been long used for clades within the currently recognized taxon. Being described mainly from rDNA sequences, they vary considerably in form, having no clear morphological distinctive characters (synapomorphies), but for the most part they are amoeboids with filose, reticulose, or microtubule-supported pseudopods. In the absence of an apomorphy, the group is ill-defined, and its composition has been very fluid. Some Rhizaria possess mineral exoskeletons, which are in different clades within Rhizaria made out of opal, celestite, or calcite. Certain species can attain sizes of more than a centimeter with some species being able to form cylindrical colonies approximately 1 cm in diameter and greater than 1 m in length. They feed by capturing and engulfing prey with the extensions of their pseudopodia; forms that are symbiotic with unicellular algae contribute significantly to the total primary production of the ocean.
Amorphea is a taxonomic supergroup that includes the basal Amoebozoa and Obazoa. That latter contains the Opisthokonta, which includes the Fungi, Animals and the Choanomonada, or Choanoflagellates. The taxonomic affinities of the members of this clade were originally described and proposed by Thomas Cavalier-Smith in 2002.
Chromalveolata was a eukaryote supergroup present in a major classification of 2005, then regarded as one of the six major groups within the eukaryotes. It was a refinement of the kingdom Chromista, first proposed by Thomas Cavalier-Smith in 1981. Chromalveolata was proposed to represent the organisms descended from a single secondary endosymbiosis involving a red alga and a bikont. The plastids in these organisms are those that contain chlorophyll c.
The Archaeplastida are a major group of eukaryotes, comprising the photoautotrophic red algae (Rhodophyta), green algae, land plants, and the minor group glaucophytes. It also includes the non-photosynthetic lineage Rhodelphidia, a predatorial (eukaryotrophic) flagellate that is sister to the Rhodophyta, and probably the microscopic picozoans. The Archaeplastida have chloroplasts that are surrounded by two membranes, suggesting that they were acquired directly through a single endosymbiosis event by feeding on a cyanobacterium. All other groups which have chloroplasts, besides the amoeboid genus Paulinella, have chloroplasts surrounded by three or four membranes, suggesting they were acquired secondarily from red or green algae. Unlike red and green algae, glaucophytes have never been involved in secondary endosymbiosis events.
In the classification of eukaryotes, Cabozoa was a taxon proposed by Cavalier-Smith. It was a putative clade comprising the Rhizaria and Excavata. More recent research places the Rhizaria with the Alveolata and Stramenopiles instead of the Excavata, however, so the "Cabozoa" is polyphyletic.
Corticata, in the classification of eukaryotes, is a clade suggested by Thomas Cavalier-Smith to encompass the eukaryote supergroups of the following two groups:
The SAR supergroup, also just SAR or Harosa, is a clade of Eukaryotes that includes stramenopiles (heterokonts), alveolates, and Rhizaria. The name is an acronym derived from the first letters of each of these clades; it has been alternatively spelled "RAS". The term "Harosa" has also been used. The SAR supergroup is a node-based taxon. The TSAR clade also includes the Telonemids.
Jakobids are an order of free-living, heterotrophic, flagellar eukaryotes in the supergroup Excavata. They are small, and can be found in aerobic and anaerobic environments. The order Jakobida, believed to be monophyletic, consists of only twenty species at present, and was classified as a group in 1993. There is ongoing research into the mitochondrial genomes of jakobids, which are unusually large and bacteria-like, evidence that jakobids may be important to the evolutionary history of eukaryotes.
The cryptomonads-haptophytes assemblage is a proposed but disputed monophyletic grouping of unicellular eukaryotes that are not included in the SAR supergroup. Several alternative names have been used for the group, including Hacrobia ; CCTH ; and "Eukaryomonadae".
Diaphoretickes is a major group of eukaryotic organisms, with over 400,000 species. The majority of the earth's biomass that carries out photosynthesis belongs to Diaphoretickes.
Halvaria is a taxonomic grouping of protists that includes Alveolata and Stramenopiles (Heterokonta).
The initial version of a classification system of life by British zoologist Thomas Cavalier-Smith appeared in 1978. This initial system continued to be modified in subsequent versions that were published until he died in 2021. As with classifications of others, such as Carl Linnaeus, Ernst Haeckel, Robert Whittaker, and Carl Woese, Cavalier-Smith's classification attempts to incorporate the latest developments in taxonomy., Cavalier-Smith used his classifications to convey his opinions about the evolutionary relationships among various organisms, principally microbial. His classifications complemented his ideas communicated in scientific publications, talks, and diagrams. Different iterations might have a wider or narrow scope, include different groupings, provide greater or lesser detail, and place groups in different arrangements as his thinking changed. His classifications has been a major influence in the modern taxonomy, particularly of protists.
Cryptista is a clade of alga-like eukaryotes. It is most likely related to Archaeplastida which includes plants and many algae, within the larger group Diaphoretickes.
Haptista is a proposed group of protists made up of centrohelids and haptophytes. Phylogenomic studies indicate that Haptista, together with Ancoracysta twista, forms a sister clade to the SAR+Telonemia supergroup, but it may also be sister to the Cryptista (+Archaeplastida). It is thus one of the earliest diverging Diaphoretickes.
Palpitea is a proposed clade of eukaryotes that are related to Archaeplastida and the SAR supergroup.
The neokaryotes are a proposed eukaryote clade consisting of the unikonts and the bikonts as sister of for instance the Jakobea. It arises because the Euglenozoa, Percolozoa, Tsukubea, and Jakobea are seen in this view as more basal eukaryotes. These four groups, are traditionally grouped together in the Discoba. However, the Discoba may well be paraphyletic as the neokaryotes may have emerged in them.
The Scotokaryotes (Cavalier-Smith) is a proposed basal Neokaryote clade as sister of the Diaphoretickes. Basal Scotokaryote groupings are the Metamonads, the Malawimonas and the Podiata. In this phylogeny the Discoba are sometimes seen as paraphyletic and basal Eukaryotes.
A supergroup, in evolutionary biology, is a large group of organisms that share one common ancestor and have important defining characteristics. It is an informal, mostly arbitrary rank in biological taxonomy that is often greater than phylum or kingdom, although some supergroups are also treated as phyla.