Malawimonas

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Malawimonas
Malawimonasms.jpg
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Eukaryota
Phylum: Malawimonada
Class: Malawimonadea
Order: Malawimonadida
Family: Malawimonadidae
Genus: Malawimonas
O’Kelly & Nerad 1999
Type species
Malawimonas jakobiformis
O’Kelly & Nerad 1999
Species [1]
  • M. californiana
  • M. jakobiformis

Malawimonas is a genus of unicellular, heterotrophic flagellates with uncertain phylogenetic affinities. They have variably been assigned to Excavata and Loukozoa. [2] [3] Recent studies suggest they may be closely related to the Podiata. [4] [5]

Contents

Discovery history

In 1993, Charles J. O’ Kelly studied the jakobid group of flagellates and their implications for the early diversification of eukaryotes. He recognized that Jakoba, Reclimonas, and Histonia, often referred to as “core jakobids” were morphologically somewhat similar. Interestingly, they included an unnamed and undescribed free-swimming, flagellate, and also groove-bearing cell. [6] [7]

During the initial study, these cells were thought to be members of Jakoba due to external morphological features that resemble Jakoba libera, such as the lack of a cell covering, sessile trophic stages, swimming in a similar manner, and sharing the tendency for the anterior flagellum to form a “crook". However, later discovery found that this species seemed to not fit and could not be assigned to the genus Jakoba, nor to any other genus of Jakobids, because of their discoidal mitochondrial cristae, which is different from Jakoba that have irregularly flattened, and the other Jakobid members have tubular mitochondrial cristae. [8]

This undescribed organism was later described formally as Malawimonas jakobiformis and placed in its own new family Malawimonadidae. It is a bacterivorous heterotrophic isolated from the Malawi shore of Lake Nyasa (eastern Africa). [8]

Over a decade later, a related organism has been investigated under several studies that revolved around the phylogenetic positions of the Jakobids and Cercozoans group under the names Malawimonas californiana, but there were no formal descriptions included. [9] [10] [11]

Characterization

Malawimonas, schematic diagram 709 2017 1147 Fig6l.jpg
Malawimonas, schematic diagram

Malawimonas share some common features with the jakobids and other Excavata group members, such as having a conspicuous feeding grove on the ventral side and two flagellates. The overall cytoskeleton of Malawimonas resembles Carpediemonas, typical Excavata belonging to the anaerobic Metamonada clade and closely related to Diplomonads and Retortamonads. [3] [11]

Malawimonas jakobiformis is characterized by a uninucleate, biflagellate, heterotrophic, “naked” cell, where neither scales nor lorica is present. Observation of the ultrastructure revealed a substantial glycocalyx as a surface coat. The cells of Malawimonas are usually slender, with a plastic shape often deformed by influences such as coverslip pressure or ingested food. The two flagella are approximately 1-1.5 times as long as the cell body and are more or less equal in length. The anterior flagellum has a “crook” shape, while the posterior flagellum is appressed but not attached to the ventral cell surface. Cells swim in straight lines and rotate along their longitudinal axes as they move. The posterior flagellar vane of Malawimonas jakobiformis arises from a clearly defined point on the ventral surface of the flagellum. In contrast, other jakobids' vanes have a diffuse origin along the dorsal surface. [8] [12]

Malawimonas, Jakobids, and mitochondrial origin

The early study of molecular investigations revealed that the genome of Reclinomonas americana, Jakoba libera and Malawimonas jakobiformis collectively represent the most eubacterial-like mitochondrial DNAs yet discovered among all eukaryotes. [9] Jakobids have all the basic forms of mitochondrial cristae known in eukaryotes. The mitochondrial shape has been seen as a strongly conserved character and is used to delimit the deepest evolutionary division within eukaryotes. [13]

Position within Eukaryota

A study based on alpha- and beta-tubulin phylogenies found that Malawimonas jakobiformis occupies a relatively basal position in the plant-protists superclade and is distinct from the “core jakobids”. [13]

Molecular phylogenies have not resolved the position of malawimonads within eukaryotes. Analyses of a small number of nucleus-encoded genes often place malawimonads as close relatives of metamonads. Since 2016, most phylogenomic studies have placed malawimonads separately from other excavates. Phylogenetic analyses of SSU rDNA, tubulins, and 5–7 nucleus-encoded proteins suggest that malawimonads are not specifically related to jakobids. [14] [15] [10] [16] The similarities between jakobids and malawimonads apparently reflect the ancestral morphology of excavate protists, or perhaps convergence, and not a close phylogenetic relationship. [11]

References

  1. "Malawimonas". BioLib.
  2. Cavalier-Smith T (November 2003). "The excavate protozoan phyla Metamonada Grassé emend. (Anaeromonadea, Parabasalia, Carpediemonas, Eopharyngia) and Loukozoa emend. (Jakobea, Malawimonas): their evolutionary affinities and new higher taxa". Int. J. Syst. Evol. Microbiol. 53 (Pt 6): 1741–58. doi: 10.1099/ijs.0.02548-0 . PMID   14657102.
  3. 1 2 Simpson AG (November 2003). "Cytoskeletal organization, phylogenetic affinities and systematics in the contentious taxon Excavata (Eukaryota)". Int. J. Syst. Evol. Microbiol. 53 (Pt 6): 1759–77. doi: 10.1099/ijs.0.02578-0 . PMID   14657103.
  4. Brown, Matthew W.; Heiss, Aaron A.; Kamikawa, Ryoma; Inagaki, Yuji; Yabuki, Akinori; Tice, Alexander K.; Shiratori, Takashi; Ishida, Ken-Ichiro; Hashimoto, Tetsuo (2018-01-19). "Phylogenomics Places Orphan Protistan Lineages in a Novel Eukaryotic Super-Group". Genome Biology and Evolution. 10 (2): 427–433. doi:10.1093/gbe/evy014. ISSN   1759-6653. PMC   5793813 . PMID   29360967.
  5. Lax, Gordon; Eglit, Yana; Eme, Laura; Bertrand, Erin M.; Roger, Andrew J.; Simpson, Alastair G. B. (2018-11-14). "Hemimastigophora is a novel supra-kingdom-level lineage of eukaryotes". Nature. 564 (7736): 410–414. Bibcode:2018Natur.564..410L. doi:10.1038/s41586-018-0708-8. ISSN   0028-0836. PMID   30429611. S2CID   205570993.
  6. O'KELLY, CHARLES J. (September 1993). "The Jakobid Flagellates: Structural Features of Jakoba, Reclinomonas and Histiona and Implications for the Early Diversification of Eukaryotes" . The Journal of Eukaryotic Microbiology. 40 (5): 627–636. doi:10.1111/j.1550-7408.1993.tb06120.x. ISSN   1066-5234. S2CID   85938682.
  7. Simpson, A. G. B. (2003-11-01). "Cytoskeletal organization, phylogenetic affinities and systematics in the contentious taxon Excavata (Eukaryota)". International Journal of Systematic and Evolutionary Microbiology. 53 (6): 1759–1777. doi: 10.1099/ijs.0.02578-0 . ISSN   1466-5026. PMID   14657103.
  8. 1 2 3 O'KELLY, CHARLES J.; NERAD, THOMAS A. (September 1999). "Malawimonas jakobiformis n. gen., n. sp. (Malawimonadidae n. fam.): A Jakoba-like Heterotrophic Nanoflagellate with Discoidal Mitochondrial Cristae". The Journal of Eukaryotic Microbiology. 46 (5): 522–531. doi: 10.1111/j.1550-7408.1999.tb06070.x . ISSN   1066-5234. S2CID   84289745.
  9. 1 2 Gray, Michael W.; Lang, B. Franz; Burger, Gertraud (2004-12-01). "Mitochondria of Protists" . Annual Review of Genetics. 38 (1): 477–524. doi:10.1146/annurev.genet.37.110801.142526. ISSN   0066-4197. PMID   15568984.
  10. 1 2 Rodríguez-Ezpeleta, Naiara; Brinkmann, Henner; Burger, Gertraud; Roger, Andrew J.; Gray, Michael W.; Philippe, Hervé; Lang, B. Franz (August 2007). "Toward Resolving the Eukaryotic Tree: The Phylogenetic Positions of Jakobids and Cercozoans". Current Biology. 17 (16): 1420–1425. Bibcode:2007CBio...17.1420R. doi: 10.1016/j.cub.2007.07.036 . ISSN   0960-9822. PMID   17689961. S2CID   15014715.
  11. 1 2 3 Archibald, John M.; Simpson, Alastair G.B.; Slamovits, Claudio H., eds. (2017). Handbook of the Protists. Cham: Springer International Publishing. doi:10.1007/978-3-319-28149-0. ISBN   978-3-319-28147-6. S2CID   43539893.
  12. O'Kelly, Charles J. (December 1997). "Ultrastructure of trophozoites, zoospores and cysts of Reclinomonas americana Flavin & Nerad, 1993 (Protista incertae sedis: Histionidae)" . European Journal of Protistology. 33 (4): 337–348. doi:10.1016/s0932-4739(97)80045-4. ISSN   0932-4739.
  13. 1 2 Edgcomb, Virginia P.; Roger, Andrew J.; Simpson, Alastair G. B.; Kysela, David T.; Sogin, Mitchell L. (2001-04-01). "Evolutionary Relationships Among "Jakobid" Flagellates as Indicated by Alpha- and Beta-Tubulin Phylogenies". Molecular Biology and Evolution. 18 (4): 514–522. doi: 10.1093/oxfordjournals.molbev.a003830 . ISSN   1537-1719. PMID   11264402.
  14. Simpson, Alastair G. B.; Inagaki, Yuji; Roger, Andrew J. (2005-11-24). "Comprehensive Multigene Phylogenies of Excavate Protists Reveal the Evolutionary Positions of "Primitive" Eukaryotes". Molecular Biology and Evolution. 23 (3): 615–625. doi: 10.1093/molbev/msj068 . ISSN   1537-1719. PMID   16308337.
  15. Simpson, Alastair G.B.; Perley, Thomas A.; Lara, Enrique (April 2008). "Lateral transfer of the gene for a widely used marker, α-tubulin, indicated by a multi-protein study of the phylogenetic position of Andalucia (Excavata)" . Molecular Phylogenetics and Evolution. 47 (1): 366–377. Bibcode:2008MolPE..47..366S. doi:10.1016/j.ympev.2007.11.035. ISSN   1055-7903. PMID   18226931.
  16. Archibald, John M.; O'Kelly, Charles J.; Doolittle, W. Ford (2002-04-01). "The Chaperonin Genes of Jakobid and Jakobid-Like Flagellates: Implications for Eukaryotic Evolution". Molecular Biology and Evolution. 19 (4): 422–431. doi: 10.1093/oxfordjournals.molbev.a004097 . ISSN   1537-1719. PMID   11919283.