Cryptista

Last updated

Cryptista
Rhodomonas salina CCMP 322.jpg
Rhodomonas salina, a cryptophyte
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Eukaryota
Clade: Diaphoretickes
Clade: CAM
Clade: Pancryptista
Clade: Cryptista
Adl et al., 2018 [Cavalier-Smith 1989, 2018] [1]
Subtaxa

Cryptista is a clade of alga-like eukaryotes. It is most likely related to Archaeplastida which includes plants and many algae, within the larger group Diaphoretickes. [2]

Contents

Other characteristic features of cryptophyte mtDNAs include large syntenic clusters resembling α-proteobacterial operons that encode bacteria-like rRNAs, tRNAs, and ribosomal protein genes. Additionally, they are an evolutionarily significant lineage found in mostly marine, glacial and freshwater environments.

Although it has sometimes placed along with Haptista in the group Hacrobia, within the kingdom Chromista, [3] most recent studies have found that Hacrobia is not a clade. [4] For example, in 2016, a broad phylogenomic study found that cryptists fall within the group Archaeplastida, while haptophytes are closely related to the SAR supergroup. [5] [6]

Taxonomy

Based on studies done by Cavalier-Smith, Chao & Lewis 2015 [7] [8]

[10] [11]

Related Research Articles

<span class="mw-page-title-main">Rollomonadia</span> Division of algae

Rollomonadia is a group of single-celled flagellates. It contains a small group of heterotrophic flagellates known as katablepharids, as well as the abundant cryptomonads (=cryptophytes), which comprise the heterotrophic Goniomonadea and the photosynthetic Cryptophyceae. Together with Palpitomonas and the Endohelea heliozoans, they compose the phylum Cryptista.

<span class="mw-page-title-main">Centrohelid</span> Group of algae

The centrohelids or centroheliozoa are a large group of heliozoan protists. They include both mobile and sessile forms, found in freshwater and marine environments, especially at some depth.

<span class="mw-page-title-main">Chromista</span> Eukaryotic biological kingdom

Chromista is a proposed but polyphyletic biological kingdom, refined from the Chromalveolata, consisting of single-celled and multicellular eukaryotic species that share similar features in their photosynthetic organelles (plastids). It includes all eukaryotes whose plastids contain chlorophyll c and are surrounded by four membranes. If the ancestor already possessed chloroplasts derived by endosymbiosis from red algae, all non-photosynthetic Chromista have secondarily lost the ability to photosynthesise. Its members might have arisen independently as separate evolutionary groups from the last eukaryotic common ancestor.

<span class="mw-page-title-main">Opisthokont</span> Group of eukaryotes which includes animals and fungi, among other groups

The opisthokonts are a broad group of eukaryotes, including both the animal and fungus kingdoms. The opisthokonts, previously called the "Fungi/Metazoa group", are generally recognized as a clade. Opisthokonts together with Apusomonadida and Breviata comprise the larger clade Obazoa.

<span class="mw-page-title-main">Bikont</span> Group of eukaryotes

A bikont is any of the eukaryotic organisms classified in the group Bikonta. Many single-celled and multi-celled organisms are members of the group, and these, as well as the presumed ancestor, have two flagella.

<span class="mw-page-title-main">Chromalveolata</span> Group of eukaryotic organisms

Chromalveolata was a eukaryote supergroup present in a major classification of 2005, then regarded as one of the six major groups within the eukaryotes. It was a refinement of the kingdom Chromista, first proposed by Thomas Cavalier-Smith in 1981. Chromalveolata was proposed to represent the organisms descended from a single secondary endosymbiosis involving a red alga and a bikont. The plastids in these organisms are those that contain chlorophyll c.

<span class="mw-page-title-main">Archaeplastida</span> Clade of eukaryotes containing land plants and some algae

The Archaeplastida are a major group of eukaryotes, comprising the photoautotrophic red algae (Rhodophyta), green algae, land plants, and the minor group glaucophytes. It also includes the non-photosynthetic lineage Rhodelphidia, a predatorial (eukaryotrophic) flagellate that is sister to the Rhodophyta, and probably the microscopic picozoans. The Archaeplastida have chloroplasts that are surrounded by two membranes, suggesting that they were acquired directly through a single endosymbiosis event by phagocytosis of a cyanobacterium. All other groups which have chloroplasts, besides the amoeboid genus Paulinella, have chloroplasts surrounded by three or four membranes, suggesting they were acquired secondarily from red or green algae. Unlike red and green algae, glaucophytes have never been involved in secondary endosymbiosis events.

<span class="mw-page-title-main">Discosea</span> Class of amoebae

Discosea is a class of Amoebozoa, consisting of naked amoebae with a flattened, discoid body shape. Members of the group do not produce tubular or subcylindrical pseudopodia, like amoebae of the class Tubulinea. When a discosean is in motion, a transparent layer called hyaloplasm forms at the leading edge of the cell. In some discoseans, short "subpseudopodia" may be extended from this hyaloplasm, but the granular contents of the cell do not flow into these, as in true pseudopodia. Discosean amoebae lack hard shells, but some, like Cochliopodium and Korotnevella secrete intricate organic scales which may cover the upper (dorsal) surface of the cell. No species have flagella or flagellated stages of life.

<span class="mw-page-title-main">Telonemia</span> Phylum of single-celled organisms

Telonemia is a phylum of microscopic eukaryotes commonly known as telonemids. They are unicellular free-living flagellates with a unique combination of cell structures, including a highly complex cytoskeleton unseen in other eukaryotes.

<span class="mw-page-title-main">Corticata</span> Type of plant

Corticata, in the classification of eukaryotes, is a group suggested by Thomas Cavalier-Smith to encompass the eukaryote supergroups of the following two groups:

<span class="mw-page-title-main">Hacrobia</span> Group of algae

The cryptomonads-haptophytes assemblage is a proposed but disputed monophyletic grouping of unicellular eukaryotes that are not included in the SAR supergroup. Several alternative names have been used for the group, including Hacrobia ; CCTH ; and "Eukaryomonadae".

<span class="mw-page-title-main">Katablepharid</span> Group of algae

The kathablepharids or katablepharids are a group of heterotrophic flagellates closely related to cryptomonads. First described by Heinrich Leonhards Skuja in 1939, kathablepharids were named after the genus Kathablepharis. This genus is corrected to Katablepharis under botanical nomenclature, but the original spelling is maintained under zoological nomenclature. They are single-celled protists with two anteriorly directed flagella, an anterior cytostome for ingesting eukaryotic prey, and a sheath that covers the cell membrane. They have extrusomes known as ejectisomes, as well as tubular mitochondrial cristae.

Rigifilida is a clade of non-ciliate phagotrophic eukaryotes. It consists of two genera: Micronuclearia and Rigifila.

<span class="mw-page-title-main">Haptista</span> Group of protists

Haptista is a proposed group of protists made up of centrohelids and haptophytes. Phylogenomic studies indicate that Haptista, together with Ancoracysta twista, forms a sister clade to the SAR+Telonemia supergroup, but it may also be sister to the Cryptista (+Archaeplastida). It is thus one of the earliest diverging Diaphoretickes.

Endohelea is a proposed clade of eukaryotes that are related to Archaeplastida and the SAR supergroup. They used to be considered heliozoans, but phylogenetically they belong to a group of microorganisms known as Cryptista.

Palpitea is a proposed clade of eukaryotes that are related to Archaeplastida and the SAR supergroup.

Corbihelia is a proposed phylum of eukaryotes.

<span class="mw-page-title-main">Corbistoma</span> Proposed clade within the Cryptista

Corbistoma is a polyphyletic proposed clade within the Cryptista which includes the Picobiliphytes and Telonemidae.

<span class="mw-page-title-main">Cortical alveolum</span> Cellular organelle found in protists

The cortical alveolum is a cellular organelle consisting of a vesicle located under the cytoplasmic membrane, to which they give support. The term "corticate" comes from an evolutionary hypothesis about the common origin of kingdoms Plantae and Chromista, because both kingdoms have cortical alveoli in at least one phylum. At least three protist lineages exhibit these structures: Telonemia, Alveolata and Glaucophyta.

Eolouka is a paraphyletic phylum of protists localized in the clade Discoba. It contains two lineages: Jakobea and Tsukubea, the last containing only one genus, Tsukubamonas.

References

  1. Adl, Sina M.; Bass, David; Lane, Christopher E.; Lukeš, Julius; Schoch, Conrad L.; Smirnov, Alexey; Agatha, Sabine; Berney, Cedric; Brown, Matthew W. (2018-09-26). "Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes". The Journal of Eukaryotic Microbiology. 66 (1): 4–119. doi:10.1111/jeu.12691. ISSN   1550-7408. PMC   6492006 . PMID   30257078.
  2. Adl SM, Bass D, Lane CE, Lukeš J, Schoch CL, Smirnov A, et al. (January 2019). "Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes". The Journal of Eukaryotic Microbiology. 66 (1): 4–119. doi:10.1111/jeu.12691. PMC   6492006 . PMID   30257078.
  3. Ruggiero, Michael A.; Gordon, Dennis P.; Orrell, Thomas M.; Bailly, Nicolas; Bourgoin, Thierry; Brusca, Richard C.; Cavalier-Smith, Thomas; Guiry, Michael D.; Kirk, Paul M. (2015-04-29). "A Higher Level Classification of All Living Organisms". PLOS ONE. 10 (4): e0119248. Bibcode:2015PLoSO..1019248R. doi: 10.1371/journal.pone.0119248 . ISSN   1932-6203. PMC   4418965 . PMID   25923521.
  4. Burki F, Roger AJ, Brown MW, Simpson AG (January 2020). "The New Tree of Eukaryotes". Trends in Ecology & Evolution. 35 (1): 43–55. doi: 10.1016/j.tree.2019.08.008 . PMID   31606140.
  5. Burki F; Kaplan M; Tikhonenkov DV; Zlatogursky V; Minh BQ; Radaykina LV; Smirnov A; Mylnikov AP; Keeling PJ (2016), "Untangling the early diversification of eukaryotes: a phylogenomic study of the evolutionary origins of Centrohelida, Haptophyta and Cryptista.", Proc Biol Sci, 283 (1823): 20152802, doi:10.1098/rspb.2015.2802, PMC   4795036 , PMID   26817772
  6. Burki, F; Inagaki, Y; Bråte, J; Archibald, J.; Keeling, P.; Cavalier-Smith, T; Sakaguchi, M; Hashimoto, T; Horak, A; Kumar, S; Klaveness, D; Jakobsen, K.S; Pawlowski, J; Shalchian-Tabrizi, K (2009). "Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, Telonemia and Centroheliozoa, are related to photosynthetic chromalveolates" (Free full text). Genome Biology and Evolution. 1: 231–8. doi:10.1093/gbe/evp022. PMC   2817417 . PMID   20333193.
  7. Cavalier-Smith; Chao; Lewis (2015), "Multiple origins of Heliozoa from flagellate ancestors: New cryptist subphylum Corbihelia, superclass Corbistoma, and monophyly of Haptista, Cryptista, Hacrobia and Chromista", Molecular Phylogenetics and Evolution, 93: 331–362, doi: 10.1016/j.ympev.2015.07.004 , PMID   26234272
  8. Tedersoo, Leho (2017), "Proposal for practical multi-kingdom classification of eukaryotes based on monophyly and comparable divergence time criteria", bioRxiv, 2017, doi:10.1101/240929, S2CID   90691603
  9. "Katablepharids".
  10. https://royalsocietypublishing.org/doi/10.1098/rspb.2015.2802
  11. https://www.researchgate.net/figure/Character-evolution-in-the-Cryptista-a-The-phylogenetic-relationship-among_fig6_261519725

Takaramoto, S., Fainsod, S., Nagata, T., Rozenberg, A., Béjà, O., & Inoue, K., S (2024), The roles of an extended N-terminal region and ETD motif in a pump-like cation channelrhodopsin discovered in a lake microbiome., Journal of Molecular Biology{{citation}}: Check |url= value (help)CS1 maint: multiple names: authors list (link)