The Chlorophyceae are one of the classes of green algae, distinguished mainly on the basis of ultrastructural morphology. They are usually green due to the dominance of pigments chlorophyll a and chlorophyll b. The chloroplast may be discoid, plate-like, reticulate, cup-shaped, spiral- or ribbon-shaped in different species. Most of the members have one or more storage bodies called pyrenoids located in the chloroplast. Pyrenoids contain protein besides starch. Some green algae may store food in the form of oil droplets. They usually have a cell wall made up of an inner layer of cellulose and outer layer of pectose.
Chlorophyta is a taxon of green algae informally called chlorophytes. The name is used in two very different senses, so care is needed to determine the use by a particular author. In older classification systems, it is a highly paraphyletic group of all the green algae within the green plants (Viridiplantae) and thus includes about 7,000 species of mostly aquatic photosynthetic eukaryotic organisms. In newer classifications, it is the sister clade of the streptophytes/charophytes. The clade Streptophyta consists of the Charophyta in which the Embryophyta emerged. In this latter sense the Chlorophyta includes only about 4,300 species. About 90% of all known species live in freshwater. Like the land plants, green algae contain chlorophyll a and chlorophyll b and store food as starch in their plastids.
The plastid is a membrane-bound organelle found in the cells of plants, algae, and some other eukaryotic organisms. They are considered to be intracellular endosymbiotic cyanobacteria. Examples include chloroplasts, chromoplasts, and leucoplasts.
Chlamydomonadales, also known as Volvocales, are an order of flagellated or pseudociliated green algae, specifically of the Chlorophyceae. Chlamydomonadales can form planar or spherical colonies. These vary from Gonium up to Volvox. Each cell has two flagella, and is similar in appearance to Chlamydomonas, with the flagella throughout the colony moving in coordination.
The Chrysophyceae, usually called chrysophytes, chrysomonads, golden-brown algae or golden algae are a large group of algae, found mostly in freshwater. Golden algae is also commonly used to refer to a single species, Prymnesium parvum, which causes fish kills.
The green algae are a group consisting of the Prasinodermophyta and its unnamed sister which contains the Chlorophyta and Charophyta/Streptophyta. The land plants (Embryophytes) have emerged deep in the Charophyte alga as sister of the Zygnematophyceae. Since the realization that the Embryophytes emerged within the green algae, some authors are starting to include them. The completed clade that includes both green algae and embryophytes is monophyletic and is referred to as the clade Viridiplantae and as the kingdom Plantae. The green algae include unicellular and colonial flagellates, most with two flagella per cell, as well as various colonial, coccoid and filamentous forms, and macroscopic, multicellular seaweeds. There are about 22,000 species of green algae. Many species live most of their lives as single cells, while other species form coenobia (colonies), long filaments, or highly differentiated macroscopic seaweeds.
Charophyta is a group of freshwater green algae, called charophytes, sometimes treated as a division, yet also as a superdivision or an unranked clade. The terrestrial plants, the Embryophyta emerged deep within Charophyta, possibly from terrestrial unicellular charophytes, with the class Zygnematophyceae as a sister group.
Viridiplantae constitute a clade of eukaryotic organisms that comprises approximately 450,000–500,000 species that play important roles in both terrestrial and aquatic ecosystems. They include the green algae, which are primarily aquatic, and the land plants (embryophytes), which emerged from within them. Green algae traditionally excludes the land plants, rendering them a paraphyletic group. However it is accurate to think of land plants as a kind of alga. Since the realization that the embryophytes emerged from within the green algae, some authors are starting to include them. They have cells with cellulose in their cell walls, and primary chloroplasts derived from endosymbiosis with cyanobacteria that contain chlorophylls a and b and lack phycobilins. Corroborating this, a basal phagotroph archaeplastida group has been found in the Rhodelphydia.
The Archaeplastida are a major group of eukaryotes, comprising the photoautotrophic red algae (Rhodophyta), green algae, land plants, and the minor group glaucophytes. It also includes the non-photosynthetic lineage Rhodelphidia, a predatorial (eukaryotrophic) flagellate that is sister to the Rhodophyta, and probably the microscopic picozoans. The Archaeplastida have chloroplasts that are surrounded by two membranes, suggesting that they were acquired directly through a single endosymbiosis event by phagocytosis of a cyanobacterium. All other groups which have chloroplasts, besides the amoeboid genus Paulinella, have chloroplasts surrounded by three or four membranes, suggesting they were acquired secondarily from red or green algae. Unlike red and green algae, glaucophytes have never been involved in secondary endosymbiosis events.
Eustigmatophytes are a small group of eukaryotic forms of algae that includes marine, freshwater and soil-living species.
Oocystaceae is a family of green algae, in the order Chlorellales. The type genus is Oocystis.
The Tetrasporaceae are a family of green algae, specifically of the Chlamydomonadales.
Valkanoviella is a monotypic genus of green algae, in the family Chlorococcaceae. It only contains one known species, Valkanoviella vaucheriaeBourrelly, 1965.
The Mesostigmatophyceae are a class of basal green algae found in freshwater. In a narrow circumscription, the class contains a single genus, Mesostigma. AlgaeBase then places the order within its circumscription of Charophyta. A clade containing Chlorokybus and Spirotaenia may either be added, or treated as a sister, with Chlorokybus placed in a separate class, Chlorokybophyceae. When broadly circumscribed, Mesostigmatophyceae may be placed as sister to all other green algae, or as sister to all Streptophyta.
Paulinella is a genus of at least eleven species including both freshwater and marine amoeboids. Like many members of euglyphids it is covered by rows of siliceous scales, and use filose pseudopods to crawl over the substrate of the benthic zone.
Mesostigma is a genus of unicellular biflagellate freshwater green algae, with a single species Mesostigma viride, covered by an outer layer of basket‐like scales instead of a cell wall. As of February 2022, AlgaeBase classified it as the only genus in the family Mesostigmataceae, the only family in the order Mesostigmatales, the only order in the class Mesostigmatophyceae. It is now considered to be one of the earliest diverging members of green plants/algae (Viridiplantae).
The Klebsormidiaceae are a family containing five genera of charophyte green alga forming multicellular, non-branching filaments. The genus Chlorokybus was previously included as well, but this problematic and poorly known genus is now placed in a separate class Chlorokybophyceae.
Red algae, or Rhodophyta, are one of the oldest groups of eukaryotic algae. The Rhodophyta comprises one of the largest phyla of algae, containing over 7,000 currently recognized species with taxonomic revisions ongoing. The majority of species (6,793) are found in the Florideophyceae (class), and mostly consist of multicellular, marine algae, including many notable seaweeds. Red algae are abundant in marine habitats but relatively rare in freshwaters. Approximately 5% of red algae species occur in freshwater environments, with greater concentrations found in warmer areas. Except for two coastal cave dwelling species in the asexual class Cyanidiophyceae, there are no terrestrial species, which may be due to an evolutionary bottleneck in which the last common ancestor lost about 25% of its core genes and much of its evolutionary plasticity.
Cyanophora paradoxa is a freshwater species of Glaucophyte that is used as a model organism. C. paradoxa has two cyanelles or chloroplasts where photosynthesis occurs. Cyanelles are unusual organelles in that they retain a rudimentary peptidoglycan wall. The cyanelle genome of C. paradoxa strain LB 555 was sequenced and published in 1995. The nuclear genome was also sequenced and published in 2012.
Tribonema is a genus of filamentous, freshwater yellow-green algae. The holotype for the genus is the species Tribonema bombycina (C.Agardh) Derbès & Solier.
