Campylobacterota

Campylobacterota
Campylobacter
Scientific classification
Domain:	Bacteria
Kingdom:	Pseudomonadati
Phylum:	Campylobacterota Waite et al. 2021 [1]
Classes
"Campylobacteria" Desulfurellia
Synonyms
"Campylobacterota" Waite et al. 2018 Epsilobacteria Cavalier-Smith 2002 "Epsilonbacteraeota" (sic) Waite et al. 2017 [2] "Epsilonbacterota"

Campylobacterota are a phylum of Gram-negative bacteria. ^[3]

Taxonomy

Until the 2021 revision of bacterial taxonomy by the ICSP, ^[4] the entire phylum was classified within the Proteobacteria (synonym Pseudomonadota) as the Epsilonproteobacteria and the Desulfurellales. ^[5] The separation of this phylum from "Proteobacteria" was originally proposed in 2017, using GTDB-based methods. ^[2]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) ^[6] and National Center for Biotechnology Information (NCBI). ^[7]

16S rRNA based LTP_10_2024 [8] [9] [10]

120 marker proteins based GTDB 09-RS220 [11] [12] [13]

Desulfurellia Desulfurellales Desulfurellaceae Hippeaceae Campylobacteria Nautiliales Nautiliaceae Campylobacterales Nitratiruptoraceae Hydrogenimonadaceae Thioreductoraceae Helicobacteraceae Sulfurovaceae Sulfurimonadaceae Sulfurospirillaceae Arcobacteraceae Campylobacteraceae

Desulfurellia Desulfurellales Desulfurellaceae Kuever, Rainey & Widdel 2006 Hippeaceae Waite et al. 2020 {Campylobacterota_A} Campylobacteria Nautiliales Nautiliaceae Miroshnichenko et al. 2004 Campylobacterales Helicobacteraceae Garrity et al. 2006 Arcobacteraceae Waite et al. 2020 Sulfurospirillaceae Waite et al. 2020 Campylobacteraceae Vandamme & De Ley 1991 Thiovulaceae Waite et al. 2020 Sulfurimonadaceae Waite et al. 2020 Nitratiruptoraceae Waite et al. 2020 Hydrogenimonadaceae Waite et al. 2020 Sulfurovaceae Waite et al. 2020 {Campylobacterota}

See also

• List of bacterial orders
• List of bacteria genera

References

1. Oren A, Garrity GM (2021). "Valid publication of the names of forty-two phyla of prokaryotes". Int J Syst Evol Microbiol. 71 (10): 5056. doi: 10.1099/ijsem.0.005056 . PMID   34694987. S2CID   239887308.
2. Waite, David W.; Vanwonterghem, Inka; Rinke, Christian; Parks, Donovan H.; Zhang, Ying; Takai, Ken; Sievert, Stefan M.; Simon, Jörg; Campbell, Barbara J.; Hanson, Thomas E.; Woyke, Tanja; Klotz, Martin G.; Hugenholtz, Philip (2017). "Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.)". Frontiers in Microbiology. 8: 682. doi: 10.3389/fmicb.2017.00682 . ISSN   1664-302X. PMC   5401914 . PMID   28484436.
3. "www.ncbi.nlm.nih.gov" . Retrieved 2009-03-19.
4. Robitzski, Dan. "Newly Renamed Prokaryote Phyla Cause Uproar". The Scientist. LabX Media Group. Retrieved 17 February 2024.
5. Berman, Jules (2019). Taxonomic Guide to Infectious Diseases (2 ed.). Elsevier. pp. 39–119. Retrieved 17 February 2024.
6. A.C. Parte; et al. "Campylobacterota". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-09-09.
7. Sayers; et al. "Campylobacterota". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-09-09.
8. "The LTP" . Retrieved 10 December 2024.
9. "LTP_all tree in newick format" . Retrieved 10 December 2024.
10. "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
11. "GTDB release 09-RS220". Genome Taxonomy Database . Retrieved 10 May 2024.
12. "bac120_r220.sp_labels". Genome Taxonomy Database . Retrieved 10 May 2024.
13. "Taxon History". Genome Taxonomy Database . Retrieved 10 May 2024.

External links

• Epsilonproteobacteria at the U.S. National Library of Medicine Medical Subject Headings (MeSH)