Acidobacteriia

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Acidobacteriia
Acidobacterium.jpg
Acidobacterium cf. capsulatum
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Bacteria
Phylum: Acidobacteriota
Class: "Acidobacteriia"
Thrash and Coates 2010 [1]
Type genus
Acidobacterium
Kishimoto et al. 1991
Orders [2]
Synonyms
  • Acidobacteria Cavalier-Smith 2002
  • "Acidobacteriae" Oren et al. 2015
  • "Solibacteres" Battistuzzi and Hedges 2009
  • Terriglobia Thrash & Coates 2022

The "Acidobacteriia" is a class of Acidobacteriota. [1]

Contents

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature [2] and National Center for Biotechnology Information. [3] Numbered orders do not yet have any cultured representatives.

16S rRNA based phylogeny [4] 16S rRNA based LTP_08_2023 [5] [6] [7] GTDB 07-RS207 by Genome Taxonomy Database [8] [9] [10]

Order 12

Order 16-2

Acidobacteriales Cavalier-Smith 2002

"Ca. Acidoferrales" Epihov 2021

Bryobacterales Dedysh and Yilmaz 2018

Order 9

Order 21

Bryobacterales

Bryobacteraceae

Acidobacteriales

Acidobacteriaceae

"Acidoferrales"

"Acidoferraceae" Epihov et al. 2021

Bryobacterales

Bryobacteraceae Dedysh et al. 2017

Acidobacteriales

"Ca. Angelobacter" {Gp1-AA117}

"Ca. Korobacter" {"Korobacteraceae" corrig. Chuvochina et al. 2023}

"Ca. Sulfuritelmatobacter" {"Sulfotelmatobacteraceae" (sic) Pallen, Rodriguez-R & Alikhan 2022}

Acidobacteriaceae Thrash & Coates 2012 non Orla-Jesen 1909

See also

Related Research Articles

<span class="mw-page-title-main">Desulfovibrionales</span> Order of bacteria

Desulfovibrionales are a taxonomic order of bacteria belonging to the phylum Thermodesulfobacteriota, with four families. They are Gram-negative. The majority are sulfate-reducing, with the exception of Lawsonia and Bilophila. All members of this order are obligately anaerobic. Most species are mesophilic, but some are moderate thermophiles.

The Syntrophobacterales are an order of Thermodesulfobacteriota. All genera are strictly anaerobic. Many of the family Syntrophobacteraceae are sulfate-reducing. Some species are motile by using one polar flagellum.

<span class="mw-page-title-main">Desulfovibrionaceae</span> Family of bacteria

Desulfovibrionaceae is a family of bacteria belonging to the phylum Thermodesulfobacteriota.

The Halanaerobiales are an order of bacteria placed within the class Clostridia, and encompassing two families, the Halanaerobiaceae and the Halobacteroidaceae. Originally placed within the highly polyphyletic class Clostridia, according to the NCBI and LPSN, it is now thought to lie outside the Bacillota. Halanaerobiales are halophilic obligate anaerobes with a fermentative or homoacetogenic metabolism.

<span class="mw-page-title-main">Spirochaetaceae</span> Family of bacteria

The Spirochaetaceae are a family of spirochete bacteria. Some species within this family are known to causes syphilis, Lyme disease, relapsing fever, and other illnesses.

<span class="mw-page-title-main">Acidobacteriaceae</span> Family of bacteria

The Acidobacteriaceae are a family of Acidobacteriota.

The Solirubrobacterales are an order of Actinomycetota.

The Selenomonadales are an order of bacteria within the class Negativicutes; unlike most other members of Bacillota, they are Gram-negative. The phylogeny of this order was initially determined by 16S rRNA comparisons. More recently, molecular markers in the form of conserved signature indels (CSIs) have been found specific for all Selenomonadales species. On the basis of these markers, the Selenomonadales are inclusive of two distinct families, and are no longer the sole order within the Negativicutes. Several CSIs have also been found specific for both families, Sporomusaceae and Selenomonadceae. Samples of bacterial strains within this order have been isolated from the root canals of healthy human teeth.

<span class="mw-page-title-main">Acidimicrobiia</span> Class of bacteria

The Acidimicrobiia are a class of Actinomycetota, in which three families, eight genera, and nine species have been described, Acidimicrobium ferrooxidans is the type species of the order.

The Nitriliruptoria are a class of Actinomycetota, which contains five species distributed across orders.

Acidicapsa is a bacterial genus from the family of Acidobacteriaceae.

The Blastocatellales is an order of Acidobacteriota within the class Blastocatellia.

<i>Gemmatimonas</i> Genus of bacteria

Gemmatimonas is a Gram-negative, rod-shaped, motile and non-spore-forming genus of bacteria from the family of Gemmatimonaceae.

Bdellovibrionota is a phylum of bacteria.

Pelagicoccus is a Gram-negative genus of bacteria from the family of Puniceicoccaceae.

The Opitutales is an order in the phylum Verrucomicrobiota.

The Opitutaceae are a Gram-negative and chemoheterotrophic order of the domain Bacteria. Opitutaceae bacteria were isolated from soil and coastal marine springs.

The Bryobacteraceae are a family of Acidobacteriota.

The Blastocatellaceae is a family of bacteria.

Holophagae is a class of Acidobacteriota.

References

  1. 1 2 Thrash JC, Coates JD. (2010). "Class I. Acidobacteriia Cavalier-Smith 2002, 12 VP emend.". In Krieg NR, Staley JT, Brown DR, Hedlund BP, Paster BJ, Ward NL, Ludwig W, Whitman WB. (eds.). Bergey’s Manual of Systematic Bacteriology. Vol. 4 (The Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyoglomi, Gemmatimonadetes, Lentisphaerae, Verrucomicrobia, Chlamydiae, and Planctomycetes) (2nd ed.). New York, NY: Springer. p. 727. doi:10.1007/978-0-387-68572-4. ISBN   978-1-4939-3715-8.
  2. 1 2 Euzéby JP, Parte AC. "Acidobacteriia". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved May 6, 2022.
  3. ↑ Sayers; et al. "Acidobacteriia". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2021-03-20.
  4. ↑ Dedysh SN, Yilmaz P. (2018). "Refining the taxonomic structure of the phylum Acidobacteria". Int J Syst Evol Microbiol. 68: 3796–3806. doi: 10.1099/ijsem.0.003062 . PMID   30325293.
  5. ↑ "The LTP" . Retrieved 20 November 2023.
  6. ↑ "LTP_all tree in newick format" . Retrieved 20 November 2023.
  7. ↑ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
  8. ↑ "GTDB release 07-RS207". Genome Taxonomy Database . Retrieved 20 June 2022.
  9. ↑ "ar53_r207.sp_label". Genome Taxonomy Database . Retrieved 20 June 2022.
  10. ↑ "Taxon History". Genome Taxonomy Database . Retrieved 20 June 2022.
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