Holophagae

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Holophagae
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Bacteria
Phylum: Acidobacteriota
Class: Holophagae
Fukunaga et al. 2008 [1]
Type genus
Holophaga
Liesack et al. 1995
Orders [2]
Synonyms
  • "Holophagia" Oren, Parte & Garrity 2016

Holophagae is a class of Acidobacteriota. [1]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature [2] and the National Center for Biotechnology Information (NCBI). [3] Numbered orders do not yet have any cultured representatives.

Contents

16S rRNA based phylogeny [4] 16S rRNA based LTP_10_2024 [5] [6] [7] 120 marker proteins based GTDB 09-RS220 [8] [9] [10]

See also

Related Research Articles

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References

  1. 1 2 Fukunaga Y, Kurahashi M, Yanagi K, Yokota A, Harayama S. (2008). "Acanthopleuribacter pedis gen. nov., sp. nov., a marine bacterium isolated from a chiton, and description of Acanthopleuribacteraceae fam. nov., Acanthopleuribacterales ord. nov., Holophagaceae fam. nov., Holophagales ord. nov. and Holophagae classis nov. in the phylum "Acidobacteria"". Int J Syst Evol Microbiol. 58 (Pt 11): 2597–2601. doi: 10.1099/ijs.0.65589-0 . PMID   18984699.
  2. 1 2 Euzéby JP, Parte AC. "Holophagae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved May 8, 2022.
  3. Sayers. "Holophagae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2016-03-20.
  4. Dedysh SN, Yilmaz P. (2018). "Refining the taxonomic structure of the phylum Acidobacteria". Int J Syst Evol Microbiol. 68 (12): 3796–3806. doi: 10.1099/ijsem.0.003062 . PMID   30325293. S2CID   53502177.
  5. "The LTP" . Retrieved 10 December 2024.
  6. "LTP_all tree in newick format" . Retrieved 10 December 2024.
  7. "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
  8. "GTDB release 09-RS220". Genome Taxonomy Database . Retrieved 10 May 2024.
  9. "bac120_r220.sp_labels". Genome Taxonomy Database . Retrieved 10 May 2024.
  10. "Taxon History". Genome Taxonomy Database . Retrieved 10 May 2024.