Halanaerobiales

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Halanaerobiales
Scientific classification
Domain:
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Class:
Order:
Halanaerobiales

corrig. Rainey and Zhilina 1995
Families

The Halanaerobiales are an order of bacteria placed within the class Clostridia, and encompassing two families, the Halanaerobiaceae and the Halobacteroidaceae. Originally placed within the highly polyphyletic class Clostridia, according to the NCBI and LPSN, it is now thought to lie outside the Bacillota.[ citation needed ] Halanaerobiales are halophilic obligate anaerobes with a fermentative or homoacetogenic metabolism. [1]

Contents

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) [2] and National Center for Biotechnology Information (NCBI). [3]

16S rRNA based LTP_06_2022 [4] [5] [6] 120 single copy marker proteins based GTDB 08-RS214 [7] [8] [9]

Anoxybacter

Halanaerobiaceae

Halarsenatibacter

Halothermothrix

Halocella corrig. Simankova et al. 1994

Halanaerobium

Halobacteroidaceae

Acetohalobium

Sporohalobacter

Fuchsiella Zhilina et al. 2012

Selenihalanaerobacter

Halanaerobaculum Hedi et al. 2009

Halobacteroides

Natroniella

Orenia (incl. Halonatronum )

Halanaerobacter

"Anoxybacterales"
"Anoxybacteraceae"

Anoxybacter Zeng et al. 2015

DY22613
Halanaerobiales
DTU029

" Iocasia " Zhang et al. 2021

"Halothermotrichaceae"

Halothermothrix Cayol et al. 1994

"Halarsenatibacteraceae"

Halarsenatibacter Switzer Blum et al. 2010

Halanaerobiaceae

Halanaerobium corrig. Zeikus et al. 1984

"Halobacteroidales"
"Acetohalobiaceae"

"Ca. Frackibacter" Daly et al. 2016

Selenihalanaerobacter Switzer Blum et al. 2001

Fuchsiella Zhilina et al. 2012

Acetohalobium Zhilina and Zavarzin 1990

Sporohalobacter Oren et al. 1988

Halobacteroidaceae

Halonatronum Zhilina et al. 2001

Orenia Rainey & Stackebrandt 1995

Natroniella Zhilina et al. 1996

Halobacteroides Oren et al. 1984

Halanaerobacter corrig. Liaw & Mah 1996

See also

Related Research Articles

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<span class="mw-page-title-main">Hydrogenothermaceae</span> Family of bacteria

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The Thermoanaerobacterales is a polyphyletic order of bacteria placed within the polyphyletic class Clostridia, and encompassing four families: the Thermoanaerobacteraceae, the Thermodesulfobiaceae, the Thermoanaerobacterales Family III. Incertae Sedis, and the Thermoanaerobacterales Family IV. Incertae Sedis, and various unplaced genera.

Methanobacteriales is an order of archaeans in the class Methanobacteria. Species within this order differ from other methanogens in that they can use fewer catabolic substrates and have distinct morphological characteristics, lipid compositions, and RNA sequences. Their cell walls are composed of pseudomurein. Most species are Gram-positive with rod-shaped bodies and some can form long filaments. Most of them use formate to reduce carbon dioxide, but those of the genus Methanosphaera use hydrogen to reduce methanol to methane.

In taxonomy, the Methanococcales are an order of the Methanococci.

In taxonomy, the Methanocaldococcaceae are a family of microbes within the order Methanococcales. It contains two genera, the type genus Methanocaldococcus and Methanotorris. These species are coccoid in form, neutrophilic to slightly acidophilic, and predominantly motile, and they have a very short generation period, from 25 to 45 minutes under optimal conditions. They produce energy exclusively through the reduction of carbon dioxide with hydrogen. Some species have been found in marine hydrothermal vents.

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Caldicellulosiruptor is a genus of thermophilic, anaerobic, Gram-positive, non-spore forming bacteria. Originally placed within the highly polyphyletic class Clostridia, order Thermoanaerobacterales and family Thermoanaerobacterales Family III according to the NCBI and LPSN, it is now thought to lie outside of the Bacillota. Caldicellulosiruptor is known to degrade and ferment complex carbohydrates from plant matter, such as cellulose and hemicellulose, and certain species in the genus have been identified as potential candidates for biofuel production.

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<span class="mw-page-title-main">Thermoanaerobacteraceae</span> Family of bacteria

The Thermoanaerobacteraceae is a highly polyphyletic family of bacteria placed within the class clostridia. Originally placed within the highly polyphyletic class Clostridia and order Thermoanaerobacterales, according to the NCBI and LPSN, it is now thought to be a basal clade of the phylum Bacillota.

Moorella is a genus of bacteria belonging to the phylum Bacillota.

The Nautiliaceae are a family of bacteria placed in an order to itself, Nautiliales, or in the order Campylobacterales. The members of the family are all thermophilic.

<span class="mw-page-title-main">Haloferacaceae</span> Family of bacteria

Haloferacaceae is a family of halophilic, chemoorganotrophic or heterotrophic archaea within the order Haloferacales. The type genus of this family is Haloferax. Its biochemical characteristics are the same as the order Haloferacales.

Nocardioidaceae is a family of Gram-positive bacteria within the class Actinomycetia.

Halorubraceae is a family of halophilic, chemoorganotrophic or heterotrophic archaea within the order Haloferacales. The type genus of this family is Halorubrum. Its biochemical characteristics are the same as the order Haloferacales.

Haloarculaceae is a family of halophilic and mostly chemoorganotrophic archaea within the order Halobacteriales. The type genus of this family is Haloarcula. Its biochemical characteristics are the same as the order Halobacteriales.

Tepidanaerobacteraceae is a family of Gram positive bacteria in the class Clostridia.

References

  1. Singh OV (2012). Extremophiles: Sustainable Resources and Biotechnological Implications. John Wiley & Sons. pp. 76–79. ISBN   978-1-118-10300-5.
  2. J.P. Euzéby. "Halanaerobiales". List of Prokaryotic names with Standing in Nomenclature (LPSN). Archived from the original on 2013-01-27. Retrieved 2011-11-17.
  3. Sayers; et al. "Halanaerobiales". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2011-06-05.
  4. "The LTP" . Retrieved 10 May 2023.
  5. "LTP_all tree in newick format" . Retrieved 10 May 2023.
  6. "LTP_06_2022 Release Notes" (PDF). Retrieved 10 May 2023.
  7. "GTDB release 08-RS214". Genome Taxonomy Database . Retrieved 10 May 2023.
  8. "bac120_r214.sp_label". Genome Taxonomy Database . Retrieved 10 May 2023.
  9. "Taxon History". Genome Taxonomy Database . Retrieved 10 May 2023.

Further reading

Bardavid, Rahel Elevi; Oren, Aharon (2012). "The amino acid composition of proteins from anaerobic halophilic bacteria of the order Halanaerobiales". Extremophiles. 16 (3): 567–572. doi:10.1007/s00792-012-0455-y.