Myxococcota

Last updated

Myxococcota
Scientific classification Red Pencil Icon.png
Domain: Bacteria
Phylum: Myxococcota
Waite et al. 2021 [1]
Classes [2]
Synonyms
  • Deltabacteria Cavalier-Smith 2002
  • Deltaproteobacteria Kuever et al. 2006 [3]
  • "Myxococcia" Cavalier-Smith 2020
  • "Myxococcota" Waite et al. 2020

The Myxococcota are a phylum of bacteria known as the fruiting gliding bacteria. [4] All species of this group are Gram-negative. They are predominantly aerobic genera that release myxospores in unfavorable environments.

Contents

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LSPN) [5] and the National Center for Biotechnology Information (NCBI). [6]

120 conserved single-copy marker and rRNA genes [2] 16S rRNA based LTP_12_2021 [7] [8] [9] GTDB 07-RS207 by Genome Taxonomy Database [10] [11] [12]

Bdellovibrionota (outgroup)

Myxococcota
Myxococcia
Myxococcales

Anaeromyxobacteraceae

Vulgatibacteraceae

Myxococcaceae

Polyangiia
Nannocystales

Nannocystaceae

Haliangiales

Kofleriaceae

Polyangiales

Sandaracinaceae

Polyangiaceae

Deferrisomatales

Deferrisomataceae

Bradymonadales

Bradymonadaceae

Myxococcales

Vulgatibacteraceae

Anaeromyxobacteraceae

Myxococcaceae

Kofleriaceae

Nannocystaceae

Polyangiaceae (incl. Sandaracinaceae)

Myxococcia
Myxococcales

Anaeromyxobacteraceae

Vulgatibacteraceae

Myxococcaceae

Bradymonadales
Bradymonadaceae

Microvenatoraceae

Bradymonadaceae

Polyangiia
Haliangiales

Haliangiaceae

Nannocystales

Nannocystaceae

Polyangiales

Sandaracinaceae

Polyangiaceae

See also

Related Research Articles

The Aquificota phylum is a diverse collection of bacteria that live in harsh environmental settings. The name Aquificota was given to this phylum based on an early genus identified within this group, Aquifex, which is able to produce water by oxidizing hydrogen. They have been found in springs, pools, and oceans. They are autotrophs, and are the primary carbon fixers in their environments. These bacteria are Gram-negative, non-spore-forming rods. They are true bacteria as opposed to the other inhabitants of extreme environments, the Archaea.

Chrysiogenaceae is a family of bacteria.

The Thermoprotei is a class of the Thermoproteota.

The Geobacteraceae are a family within the Thermodesulfobacteriota.

<span class="mw-page-title-main">Desulfovibrionales</span> Order of bacteria

Desulfovibrionales are a taxonomic order of bacteria belonging to the phylum Thermodesulfobacteriota, with four families. They are Gram-negative. The majority are sulfate-reducing, with the exception of Lawsonia and Bilophila. All members of this order are obligately anaerobic. Most species are mesophilic, but some are moderate thermophiles.

The Syntrophobacterales are an order of Thermodesulfobacteriota. All genera are strictly anaerobic. Many of the family Syntrophobacteraceae are sulfate-reducing. Some species are motile by using one polar flagellum.

Desulfovibrionaceae is a family of bacteria belonging to the phylum Thermodesulfobacteriota.

Desulfohalobiaceae is a family of bacteria belonging to the phylum Thermodesulfobacteriota.

The Deferribacteraceae are a family of gram-negative bacteria which make energy by anaerobic respiration.

<span class="mw-page-title-main">Thermodesulfobacteriota</span> Phylum of Gram-negative bacteria

The Thermodesulfobacteriota are a phylum of thermophilic sulfate-reducing bacteria.

The phylum Elusimicrobiota, previously known as "Termite Group 1", has been shown to be widespread in different ecosystems like marine environment, sewage sludge, contaminated sites and soils, and toxic wastes. The high abundance of Elusimicrobiota representatives is only seen for the lineage of symbionts found in termites and ants.

Armatimonadota is a phylum of gram-negative bacteria.

Desulfonatronum is a Gram-negative and extremely alkaliphilic bacteria genus from the family of Desulfovibrionaceae.

Syntrophus is a Gram negative bacterial genus from the family of Syntrophaceae.

The Rhodothermales are an order of bacteria.

Balneolales is an order of bacteria.

Bdellovibrionota is a phylum of bacteria.

The Ignavibacteriales are an order of obligately anaerobic, non-photosynthetic bacteria that are closely related to the green sulfur bacteria.

The Desulfocapsaceae are a family of Thermodesulfobacteriota.

The Bryobacteraceae are a family of Acidobacteriota.

References

  1. Oren A, Garrity GM (2021). "Valid publication of the names of forty-two phyla of prokaryotes". Int J Syst Evol Microbiol. 71 (10): 5056. doi: 10.1099/ijsem.0.005056 . PMID   34694987.
  2. 1 2 Waite DW, Chuvochina M, Pelikan C, Parks DH, Yilmaz P, Wagner M, Loy A, Naganuma T, Nakai R, Whitman WB, Hahn MW, Kuever J, Hugenholtz P. (2020). "Proposal to reclassify the proteobacterial classes Deltaproteobacteria and Oligoflexia, and the phylum Thermodesulfobacteria into four phyla reflecting major functional capabilities". Int J Syst Evol Microbiol. 70 (11): 5972–6016. doi: 10.1099/ijsem.0.004213 . PMID   33151140.
  3. Kuever J, Rainey FA, Widdel F (2005). "Class IV. Deltaproteobacteria class. nov.". In Brenner DJ, Krieg NR, Staley JT, Garrity GM (eds.). Bergey's Manual of Systematic Bacteriology. Vol.  2: The Proteobacteria Part C (The Alpha-, Beta-, Delta- and Epsilonproteobacteria (2nd ed.). Springer. p. 922. doi:10.1002/9781118960608.cbm00043. ISBN   9781118960608.
  4. "www.ncbi.nlm.nih.gov" . Retrieved 2009-03-19.
  5. Euzéby JP. "Myxococcota ". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2016-03-20.
  6. Sayers. "Deltaproteobacteria". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2016-03-20.
  7. "The LTP" . Retrieved 23 February 2021.
  8. "LTP_all tree in newick format" . Retrieved 23 February 2021.
  9. "LTP_12_2021 Release Notes" (PDF). Retrieved 23 February 2021.
  10. "GTDB release 07-RS207". Genome Taxonomy Database . Retrieved 20 June 2022.
  11. "ar53_r207.sp_label". Genome Taxonomy Database . Retrieved 20 June 2022.
  12. "Taxon History". Genome Taxonomy Database . Retrieved 20 June 2022.