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Biodegradation is the breakdown of organic matter by microorganisms, such as bacteria and fungi. It is generally assumed to be a natural process, which differentiates it from composting. Composting is a human-driven process in which biodegradation occurs under a specific set of circumstances.
An aerobic organism or aerobe is an organism that can survive and grow in an oxygenated environment. The ability to exhibit aerobic respiration may yield benefits to the aerobic organism, as aerobic respiration yields more energy than anaerobic respiration. Energy production of the cell involves the synthesis of ATP by an enzyme called ATP synthase. In aerobic respiration, ATP synthase is coupled with an electron transport chain in which oxygen acts as a terminal electron acceptor. In July 2020, marine biologists reported that aerobic microorganisms (mainly), in "quasi-suspended animation", were found in organically poor sediments, up to 101.5 million years old, 250 feet below the seafloor in the South Pacific Gyre (SPG), and could be the longest-living life forms ever found.
Aerobic exercise is physical exercise of low to high intensity that depends primarily on the aerobic energy-generating process. "Aerobic" is defined as "relating to, involving, or requiring oxygen", and refers to the use of oxygen to meet energy demands during exercise via aerobic metabolism adequately. Aerobic exercise is performed by repeating sequences of light-to-moderate intensity activities for extended periods of time. Examples of cardiovascular or aerobic exercise are medium- to long-distance running or jogging, swimming, cycling, stair climbing and walking.
A facultative anaerobic organism is an organism that makes ATP by aerobic respiration if oxygen is present, but is capable of switching to fermentation if oxygen is absent.
The Rhizobiaceae is a family of Pseudomonadota comprising multiple subgroups that enhance and hinder plant development. Some bacteria found in the family are used for plant nutrition and collectively make up the rhizobia. Other bacteria such as Agrobacterium tumefaciens and Rhizobium rhizogenes severely alter the development of plants in their ability to induce crown galls or hairy roots, respectively. The family has been of an interest to scientists for centuries in their ability to associate with plants and modify plant development. The Rhizobiaceae are, like all Pseudomonadota, Gram-negative. They are aerobic, and the cells are usually rod-shaped. Many species of the Rhizobiaceae are diazotrophs which are able to fix nitrogen and are symbiotic with plant roots.
Methanotrophs are prokaryotes that metabolize methane as their source of carbon and chemical energy. They are bacteria or archaea, can grow aerobically or anaerobically, and require single-carbon compounds to survive.
The class Flavobacteriia is composed of a single class of environmental bacteria. It contains the family Flavobacteriaceae, which is the largest family in the phylum Bacteroidota. This class is widely distributed in soil, fresh, and seawater habitats. The name is often spelt Flavobacteria, but was officially named Flavobacteriia in 2012.
Mycobacterium vanbaalenii is a rapidly growing mycobacterium that can use polycyclic aromatic hydrocarbons. It was first isolated from petroleum-contaminated estuarine sediments and has been shown by 16S rRNA gene sequencing to be closely related to Mycobacterium aurum and Mycobacterium vaccae. M. vanbaalenii has potential use in the bioremediation of polycyclic aromatic hydrocarbon contaminated environmental sites. Etymology: vanbaalenii of Van Baalen, in memory of Dr Chase Van Baalen, late Professor at The University of Texas Marine Science Institute, Port Aransas Marine Laboratory, Port Aransas, TX, USA.
Aerobic gymnastics or sport aerobics is a competitive sport originating from traditional aerobics in which complex, high-intensity movement patterns and elements of varying difficulty are performed to music.
The Southern Pacific Gyre is part of the Earth's system of rotating ocean currents, bounded by the Equator to the north, Australia to the west, the Antarctic Circumpolar Current to the south, and South America to the east. The center of the South Pacific Gyre is the oceanic pole of inaccessibility, the site on Earth farthest from any continents and productive ocean regions and is regarded as Earth's largest oceanic desert. With an area of 37 million square kilometres it makes up ~10 % of the Earth's ocean surface. The gyre, as with Earth's other four gyres, contains an area with elevated concentrations of pelagic plastics, chemical sludge, and other debris known as the South Pacific garbage patch.
Aerobic anoxygenic phototrophic bacteria (AAPBs) are Alphaproteobacteria and Gammaproteobacteria that are obligate aerobes that capture energy from light by anoxygenic photosynthesis. Anoxygenic photosynthesis is the phototrophic process where light energy is captured and stored as ATP. The production of oxygen is non-existent and, therefore, water is not used as an electron donor. They are widely distributed marine bacteria that may constitute over 10% of the open ocean microbial community. They can be particularly abundant in oligotrophic conditions where they were found to be 24% of the community. Aerobic anoxygenic phototrophic bacteria are photoheterotrophic (phototroph) microbes that exist in a variety of aquatic environments. Most are obligately aerobic, meaning they require oxygen to grow. One aspect of these bacteria is that they, unlike other similar bacteria, are unable to utilize BChl (bacteriochlorophyll) for anaerobic growth. The only photosynthetic pigment that exists in AAPB is BChl-a. Anaerobic phototrophic bacteria, on the contrary, can contain numerous species of photosynthetic pigments like bacteriochlorophyll-a. These bacteria can be isolated using carotenoid presence and medias containing organic compounds. Predation, as well as the availability of phosphorus and light, have been shown to be important factors that influence AAPB growth in their natural environments. AAPBs are thought to play an important role in carbon cycling by relying on organic matter substrates and acting as sinks for dissolved organic carbon. There is still a knowledge gap in research areas regarding the abundance and genetic diversity of AAPB, as well as the environmental variables that regulate these two properties.
Lentisphaerota is a phylum of bacteria closely related to Chlamydiota and Verrucomicrobiota.
Hoeflea is a genus of Gram-negative, strictly aerobic, oxidase- and catalase-positive, non-spore-forming, rod-shaped bacteria.
Hoeflea alexandrii is a Gram-negative, oxidase-negative, catalase-positive, non-spore-forming, motile bacteria with a single polar flagella from the genus of Hoeflea which was isolated from Alexandrium minutum AL1V in Vigo in Spain.
Hoeflea anabaenae is a bacterium from the genus of Hoeflea.
Hoeflea halophila is a Gram-negative, aerobic, motile bacteria from the genus of Hoeflea which was isolated from marine sediment from the Sea of Japan.
Hoeflea siderophila is a neutrophilic iron-oxidizing, motile bacteria with a single polar flagellum, from the genus Hoeflea which was isolated from the Staraya Russa Resort in the Novgorod region in Russia.
Aquimarina is a strictly aerobic and halophilic bacterial genus from the family of Flavobacteriaceae. Aquimarina can cause diseases in marine eukaryotes.
Roseitalea porphyridii is a Gram-negative and strictly aerobic bacterium from the genus Roseitalea that has been isolated from the alga Porphyridium marinum in Korea.
Cytophagales is an order of non-spore forming, rod-shaped, Gram-negative bacteria that move through a gliding or flexing motion. These chemoorganotrophs are important remineralizers of organic materials into micronutrients. They are widely dispersed in the environment, found in ecosystems including soil, freshwater, seawater and sea ice. Cytophagales is included in the Bacteroidota phylum.
References
- ↑ LSPN lpsn.dsmz.de
- ↑ Straininfo of Hoeflea phototrophica
- ↑ Biebl, H. (2006). "Hoeflea phototrophica sp. nov., a novel marine aerobic alphaproteobacterium that forms bacteriochlorophyll a". International Journal of Systematic and Evolutionary Microbiology. 56 (4): 821–826. doi: 10.1099/ijs.0.63958-0 . hdl: 10033/13062 . PMID 16585702.
- ↑ UniProt