A holotype (Latin: holotypus) is a single physical example (or illustration) of an organism used when the species (or lower-ranked taxon) was formally described. It is either the single such physical example (or illustration) or one of several examples, but explicitly designated as the holotype. Under the International Code of Zoological Nomenclature (ICZN), a holotype is one of several kinds of name-bearing types. In the International Code of Nomenclature for algae, fungi, and plants (ICN) and ICZN, the definitions of types are similar in intent but not identical in terminology or underlying concept.
For example, the holotype for the butterfly Plebejus idas longinus is a preserved specimen of that subspecies, held by the Museum of Comparative Zoology at Harvard University. In botany and mycology, an isotype is a duplicate of the holotype, generally pieces from the same individual plant or samples from the same genetic individual.
A holotype is not necessarily "typical" of that taxon, although ideally it is. Sometimes just a fragment of an organism is the holotype, particularly in the case of a fossil. For example, the holotype of Pelorosaurus humerocristatus (Duriatitan), a large herbivorous dinosaur from the early Cretaceous period, is a fossil leg bone stored at the Natural History Museum in London. Even if a better specimen is subsequently found, the holotype is not superseded.
Under the ICN, an additional and clarifying type could be designated an epitype under article 9.8, where the original material is demonstrably ambiguous or insufficient.
A conserved type (ICN article 14.3) is sometimes used to correct a problem with a name which has been misapplied; this specimen replaces the original holotype.
In the absence of a holotype, another type may be selected, out of a range of different kinds of type, depending on the case, a lectotype or a neotype.
For example, in both the ICN and the ICZN a neotype is a type that was later appointed in the absence of the original holotype. Additionally, under the ICZN the commission is empowered to replace a holotype with a neotype, when the holotype turns out to lack important diagnostic features needed to distinguish the species from its close relatives. For example, the crocodile-like archosaurian reptile Parasuchus hislopi Lydekker, 1885 was described based on a premaxillary rostrum (part of the snout), but this is no longer sufficient to distinguish Parasuchus from its close relatives. This made the name Parasuchus hislopi a nomen dubium . Indian-American paleontologist Sankar Chatterjee proposed that a new type specimen, a complete skeleton, be designated. [1] The International Commission on Zoological Nomenclature considered the case and agreed to replace the original type specimen with the proposed neotype. [2]
The procedures for the designation of a new type specimen when the original is lost come into play for some recent, high-profile species descriptions in which the specimen designated as the holotype was a living individual that was allowed to remain in the wild (e.g. a new species of capuchin monkey, genus Cebus , [3] the bee species Marleyimyia xylocopae , or the Arunachal macaque Macaca munzala [4] ). In such a case, there is no actual type specimen available for study, and the possibility exists that—should there be any perceived ambiguity in the identity of the species—subsequent authors can invoke various clauses in the ICZN Code that allow for the designation of a neotype. Article 75.3.7 of the ICZN [5] requires that the designation of a neotype must be accompanied by "a statement that the neotype is, or immediately upon publication has become, the property of a recognized scientific or educational institution, cited by name, that maintains a research collection, with proper facilities for preserving name-bearing types, and that makes them accessible for study", but there is no such requirement for a holotype.
The International Code of Zoological Nomenclature (ICZN) is a widely accepted convention in zoology that rules the formal scientific naming of organisms treated as animals. It is also informally known as the ICZN Code, for its publisher, the International Commission on Zoological Nomenclature. The rules principally regulate:
In zoological nomenclature, a type species is the species name with which the name of a genus or subgenus is considered to be permanently taxonomically associated, i.e., the species that contains the biological type specimen. A similar concept is used for suprageneric groups and called a type genus.
In biology, a type is a particular specimen of an organism to which the scientific name of that organism is formally associated. In other words, a type is an example that serves to anchor or centralizes the defining features of that particular taxon. In older usage, a type was a taxon rather than a specimen.
In biological taxonomy, the type genus is the genus which defines a biological family and the root of the family name.
The Arunachal macaque is a macaque native to Eastern Himalayas of Bhutan, China and India. It is listed as Endangered on the IUCN Red List.
In binomial nomenclature, a nomen dubium is a scientific name that is of unknown or doubtful application.
In biological nomenclature, a syntype is any one of two or more biological types that is listed in a description of a taxon where no holotype was designated. Precise definitions of this and related terms for types have been established as part of the International Code of Zoological Nomenclature and the International Code of Nomenclature for algae, fungi, and plants.
Nomenclature codes or codes of nomenclature are the various rulebooks that govern the naming of living organisms. Standardizing the scientific names of biological organisms allows researchers to discuss findings.
In botany, an infraspecific name is the scientific name for any taxon below the rank of species, i.e. an infraspecific taxon or infraspecies. The scientific names of botanical taxa are regulated by the International Code of Nomenclature for algae, fungi, and plants (ICN). As specified by the ICN, the name of an infraspecific taxon is a combination of the name of a species and an infraspecific epithet, separated by a connecting term that denotes the rank of the taxon. An example of an infraspecific name is Astrophytum myriostigma subvar. glabrum, the name of a subvariety of the species Astrophytum myriostigma. In the previous example, glabrum is the infraspecific epithet.
In biology, a homonym is a name for a taxon that is identical in spelling to another such name, that belongs to a different taxon.
A conserved name or nomen conservandum is a scientific name that has specific nomenclatural protection. That is, the name is retained, even though it violates one or more rules which would otherwise prevent it from being legitimate. Nomen conservandum is a Latin term, meaning "a name to be conserved". The terms are often used interchangeably, such as by the International Code of Nomenclature for Algae, Fungi, and Plants (ICN), while the International Code of Zoological Nomenclature favours the term "conserved name".
Paleorhinus is an extinct genus of widespread basal phytosaur known from the Late Triassic. The genus was named in 1904 based on the type species Paleorhinus bransoni, which is known from Wyoming and Texas in the United States. Another valid species, Paleorhinus angustifrons from Bavaria, Germany, is also commonly referred to the genus. Paleorhinus had a length of about 2.5 meters.
Parasuchus is an extinct genus of basal phytosaur known from the Late Triassic of Andhra Pradesh and Madhya Pradesh, India. At its most restricted definition, Parasuchus contains a single species, Parasuchus hislopi. Parasuchus hislopi is one of several species belonging to a basal grade of phytosaurs, typified by the genus Paleorhinus. Historically, Paleorhinus has been known from better-described fossils, and many species have been lumped into that genus. Parasuchus hislopi, despite being described earlier than Paleorhinus, was considered an undiagnostic chimera until new neotype fossils were described in the late 1970s. Parasuchus hislopi and the two unambiguously valid species of Paleorhinus are all closely related; some authors have historically described them all under the species Paleorhinus, while others place the two Paleorhinus species into Parasuchus according to the principle of priority.
In zoology and botany, a paratype is a specimen of an organism that helps define what the scientific name of a species and other taxon actually represents, but it is not the holotype. Often there is more than one paratype. Paratypes are usually held in museum research collections.
The Botanical and Zoological Codes of nomenclature treat the concept of synonymy differently.
Macropterygius is a genus of ichthyosaurs known from the Late Jurassic of England. Though many specimens have been referred to this genus from all over Europe, the type specimen of the only recognized species, M. trigonus, consists of just a single vertebra. Because this cannot be used to distinguish ichthyosaurs from one another, the genus and species are currently considered nomina dubia.
In zoological nomenclature, an available name is a scientific name for a taxon of animals that has been published after 1757 and conforming to all the mandatory provisions of the International Code of Zoological Nomenclature for the establishment of a zoological name. In contrast, an unavailable name is a name that does not conform to the rules of that code and that therefore is not available for use as a valid name for a taxon. Such a name does not fulfil the requirements in Articles 10 through 20 of the Code, or is excluded under Article 1.3.
Under the International Code of Zoological Nomenclature (Code), the name-bearing type or onomatophore is the biological type that determines the application of a name. Each animal taxon regulated by the Code at least potentially has a name-bearing type. The name-bearing type can be either a type genus, type species, or one or more type specimens. For example, the name Mabuya maculata has often been used for the Noronha skink, but because the name-bearing type of the former, a lizard preserved in the Muséum national d'histoire naturelle in Paris, does not represent the same species as the Noronha skink, the name maculata cannot be used for the latter.
The Urrao antpitta, also known as Fenwick's antpitta, is a highly threatened species of bird found in the understory of cloud forest in the Andean highlands of Colombia. The first published description used the scientific name Grallaria fenwickorum ; shortly afterward, a second description using the name Grallaria urraoensis was published. The editors of the latter recognized that the name likely was a junior synonym, but others have questioned the validity of the first description, and various authorities, including the International Ornithological Congress, have adopted G. urraoensis. Antioquia antpitta has been suggested as an English-language name compromise.
This is a list of terms and symbols used in scientific names for organisms, and in describing the names. For proper parts of the names themselves, see List of Latin and Greek words commonly used in systematic names. Note that many of the abbreviations are used with or without a stop.