Mariana Matus

Last updated
Mariana Matus
Mariana Matus on Notimex.jpg
Matus on Notimex in 2018
Born
Mariana Guadalupe Matus García

Mexico City, Mexico
Alma mater Massachusetts Institute of Technology, PhD, 2018

Wageningen University, MS, 2012

National Autonomous University of Mexico, BS, 2009
Known forCEO of Biobot Analytics
Scientific career
Fields Epidemiology, Computational Biology
InstitutionsBiobot Analytics, CEO and Co-founder
Thesis Analysis of fecal biomarkers to impact clinical care and public health  (2018)
Doctoral advisor Eric Alm

Mariana Matus is a Mexican biologist and the CEO and co-founder of Biobot Analytics, a startup that aims to help governments tackle the opioid crisis and the COVID-19 pandemic by analyzing sewage samples.

Contents

Education and early career

Matus was born in Mexico City. She grew up in San Luis Potosí, Mexico. [1] She attended National Autonomous University of Mexico, where she received her Bachelor of Science in genomics [2] in 2009. She then attended Wageningen University and Research in the Netherlands, [1] where she received her Master of Science in biotechnology. She next moved to Cambridge, Massachusetts to attend Massachusetts Institute of Technology, where she received her Doctor of Philosophy in computational biology and systems biology in 2018 under the mentorship of Eric J. Alm. [3]

Her doctoral work centered on exploring the potential of using fecal biomarkers to understand epidemiological trends, [1] [3] which led to a $4 million (USD) grant from the Kuwait Foundation for the Advancement of Sciences [1] and later became the basis for her company Biobot Analytics. She performed a genomics and metabolomics analysis of wastewater sampled in residential sewage and was able to identify thousands of bacteria and metabolites that were the result of human activity over the course of a 24-hour period. [4] In addition to this work, she also collaborated with researchers in Germany to perform a microbiome analysis in mice and humans, which found that the bacteria Lactobacillus murinus can act as a probiotic to reduce the likelihood of hypertension and cardiovascular disease. [5] [6]

Biobot Analytics

Matus co-founded Biobot Analytics in 2017 with urban scientist Newsha Ghaeli. [7] The company is located in Cambridge, Massachusetts. [8] Matus sought to apply her expertise in wastewater epidemiology to detect emerging trends that can be found in sewage. [9] Namely, sewage can contain disease markers like viruses and other pathogens, chemical contaminants, and drugs, which can allow scientists to understand disease trajectories, the spread of chemical hazards, and trends in drug consumption. Matus and Ghaeli have tested their approach in Boston, Kuwait, and Seoul, collaborating with biologist, chemists, engineers, and architects. [10]

Biobot has been working to tackle the opioid epidemic in the United States by pilot testing whether they can use a robot to collect wastewater samples and detect the human metabolite that shows a person has ingested a drug. [11] The technology can be used to identify the kind of opioid, whether it is prescription or illegal, and patterns of usage across neighborhoods by testing wastewater in manholes, which are local to a community.

Biobot was piloted in Cary, North Carolina beginning in 2018 with the support of a $100,000 grant from the Bloomberg Philanthropies's Mayors Challenge. [12] In the three-month-long pilot, 10 small robots were deployed across town into the sewage system to collect waste samples, which will then be measured for their concentration of 16 different opioid-related metabolites. [13] The robots sampled from manholes that collect waste from between 4,000 and 15,000 people and were able to non-invasively identify a distribution of prescription opioids used across town. [7] Since the pilot ended, Biobot continues to monitor the manholes in Cary and has pilot studies set up in seven municipalities across Boston. Matus and her team have since pitched applying Biobot to track the opioid consumption, and other epidemiological trends, to over 800 mayors across the United States. [10]

Biobot is currently analyzing wastewater from 150 treatment plants in 30 U.S. States. [14] For example, the state of Massachusetts is currently working with Biobot to analyze wastewater from the Deer Island Wastewater Treatment Plant of Boston for coronavirus. The goal is to provide a source of data for early warning about new coronavirus outbreaks. [15]

The startup has competed in a number of startup competitions, winning prizes at MIT's DesignX startup accelerator in 2017. [16] In 2018, shortly after their launch, Matus and partner Ghaeli raised $2.5 million in seed funding from Ekistic Ventures, Y Combinator, Refactor Capital, Liquid 2 Ventures and several other investment firms. [17] Biobot's analysis for coronavirus is supported by a grant from the Massachusetts Consortium on Pathogen Readiness. [14]

Awards and honors

Related Research Articles

<span class="mw-page-title-main">Secondary metabolite</span> Type of organic compound

Secondary metabolites, also called specialised metabolites or secondary products, are a type of natural product generated by lifeforms that are not directly involved in the normal growth, development, or reproduction of the organism. Instead, they generally mediate ecological interactions, which may produce a selective advantage for the organism by increasing its survivability or fecundity. Specific secondary metabolites are often restricted to a narrow set of species within a phylogenetic group. Secondary metabolites often play an important role in plant defense against herbivory and other interspecies defenses. Humans use secondary metabolites as medicines, flavourings, pigments, and recreational drugs.

<span class="mw-page-title-main">Water quality</span> Assessment against standards for use

Water quality refers to the chemical, physical, and biological characteristics of water based on the standards of its usage. It is most frequently used by reference to a set of standards against which compliance, generally achieved through treatment of the water, can be assessed. The most common standards used to monitor and assess water quality convey the health of ecosystems, safety of human contact, extent of water pollution and condition of drinking water. Water quality has a significant impact on water supply and often determines supply options.

<span class="mw-page-title-main">Water pollution</span> Contamination of water bodies

Water pollution is the contamination of water bodies, with a negative impact on their uses. It is usually a result of human activities. Water bodies include lakes, rivers, oceans, aquifers, reservoirs and groundwater. Water pollution results when contaminants mix with these water bodies. Contaminants can come from one of four main sources. These are sewage discharges, industrial activities, agricultural activities, and urban runoff including stormwater. Water pollution may affect either surface water or groundwater. This form of pollution can lead to many problems. One is the degradation of aquatic ecosystems. Another is spreading water-borne diseases when people use polluted water for drinking or irrigation. Water pollution also reduces the ecosystem services such as drinking water provided by the water resource.

<span class="mw-page-title-main">Sanitary sewer</span> Underground pipe for transporting sewage

A sanitary sewer is an underground pipe or tunnel system for transporting sewage from houses and commercial buildings to a sewage treatment plant or disposal.

<span class="mw-page-title-main">Biochemical oxygen demand</span> Oxygen needed to remove organics from water

Biochemical oxygen demand is an analytical parameter representing the amount of dissolved oxygen (DO) consumed by aerobic bacteria growing on the organic material present in a water sample at a specific temperature over a specific time period. The BOD value is most commonly expressed in milligrams of oxygen consumed per liter of sample during 5 days of incubation at 20 °C and is often used as a surrogate of the degree of organic water pollution.

<span class="mw-page-title-main">Wastewater treatment</span> Converting wastewater into an effluent for return to the water cycle

Wastewater treatment is a process which removes and eliminates contaminants from wastewater. It thus converts it into an effluent that can be returned to the water cycle. Once back in the water cycle, the effluent creates an acceptable impact on the environment. It is also possible to reuse it. This process is called water reclamation. The treatment process takes place in a wastewater treatment plant. There are several kinds of wastewater which are treated at the appropriate type of wastewater treatment plant. For domestic wastewater the treatment plant is called a Sewage Treatment. Municipal wastewater or sewage are other names for domestic wastewater. For industrial wastewater, treatment takes place in a separate Industrial wastewater treatment, or in a sewage treatment plant. In the latter case it usually follows pre-treatment. Further types of wastewater treatment plants include Agricultural wastewater treatment and leachate treatment plants.

<span class="mw-page-title-main">Metabolomics</span> Scientific study of chemical processes involving metabolites

Metabolomics is the scientific study of chemical processes involving metabolites, the small molecule substrates, intermediates, and products of cell metabolism. Specifically, metabolomics is the "systematic study of the unique chemical fingerprints that specific cellular processes leave behind", the study of their small-molecule metabolite profiles. The metabolome represents the complete set of metabolites in a biological cell, tissue, organ, or organism, which are the end products of cellular processes. Messenger RNA (mRNA), gene expression data, and proteomic analyses reveal the set of gene products being produced in the cell, data that represents one aspect of cellular function. Conversely, metabolic profiling can give an instantaneous snapshot of the physiology of that cell, and thus, metabolomics provides a direct "functional readout of the physiological state" of an organism. There are indeed quantifiable correlations between the metabolome and the other cellular ensembles, which can be used to predict metabolite abundances in biological samples from, for example mRNA abundances. One of the ultimate challenges of systems biology is to integrate metabolomics with all other -omics information to provide a better understanding of cellular biology.

<span class="mw-page-title-main">Biosolids</span> Decontaminated sewage sludge

Biosolids are solid organic matter recovered from a sewage treatment process and used as fertilizer. In the past, it was common for farmers to use animal manure to improve their soil fertility. In the 1920s, the farming community began also to use sewage sludge from local wastewater treatment plants. Scientific research over many years has confirmed that these biosolids contain similar nutrients to those in animal manures. Biosolids that are used as fertilizer in farming are usually treated to help to prevent disease-causing pathogens from spreading to the public. Some sewage sludge can not qualify as biosolids due to persistent, bioaccumulative and toxic chemicals, radionuclides, and heavy metals at levels sufficient to contaminate soil and water when applied to land.

<span class="mw-page-title-main">Dextrorphan</span> Psychoactive cough suppressant medication

Dextrorphan (DXO) is a psychoactive drug of the morphinan class which acts as an antitussive or cough suppressant and in high doses a dissociative hallucinogen. It is the dextrorotatory enantiomer of racemorphan; the levorotatory enantiomer is levorphanol. Dextrorphan is produced by O-demethylation of dextromethorphan by CYP2D6. Dextrorphan is an NMDA antagonist and contributes to the psychoactive effects of dextromethorphan.

<span class="mw-page-title-main">Liquid chromatography–mass spectrometry</span> Analytical chemistry technique

Liquid chromatography–mass spectrometry (LC–MS) is an analytical chemistry technique that combines the physical separation capabilities of liquid chromatography with the mass analysis capabilities of mass spectrometry (MS). Coupled chromatography – MS systems are popular in chemical analysis because the individual capabilities of each technique are enhanced synergistically. While liquid chromatography separates mixtures with multiple components, mass spectrometry provides spectral information that may help to identify each separated component. MS is not only sensitive, but provides selective detection, relieving the need for complete chromatographic separation. LC–MS is also appropriate for metabolomics because of its good coverage of a wide range of chemicals. This tandem technique can be used to analyze biochemical, organic, and inorganic compounds commonly found in complex samples of environmental and biological origin. Therefore, LC–MS may be applied in a wide range of sectors including biotechnology, environment monitoring, food processing, and pharmaceutical, agrochemical, and cosmetic industries. Since the early 2000s, LC–MS has also begun to be used in clinical applications.

<span class="mw-page-title-main">Sewage treatment</span> Process of removing contaminants from municipal wastewater

Sewage treatment is a type of wastewater treatment which aims to remove contaminants from sewage to produce an effluent that is suitable to discharge to the surrounding environment or an intended reuse application, thereby preventing water pollution from raw sewage discharges. Sewage contains wastewater from households and businesses and possibly pre-treated industrial wastewater. There are a high number of sewage treatment processes to choose from. These can range from decentralized systems to large centralized systems involving a network of pipes and pump stations which convey the sewage to a treatment plant. For cities that have a combined sewer, the sewers will also carry urban runoff (stormwater) to the sewage treatment plant. Sewage treatment often involves two main stages, called primary and secondary treatment, while advanced treatment also incorporates a tertiary treatment stage with polishing processes and nutrient removal. Secondary treatment can reduce organic matter from sewage,  using aerobic or anaerobic biological processes. A so-called quarternary treatment step can also be added for the removal of organic micropollutants, such as pharmaceuticals. This has been implemented in full-scale for example in Sweden.

<span class="mw-page-title-main">Sewage</span> Wastewater that is produced by a community of people

Sewage is a type of wastewater that is produced by a community of people. It is typically transported through a sewer system. Sewage consists of wastewater discharged from residences and from commercial, institutional and public facilities that exist in the locality. Sub-types of sewage are greywater and blackwater. Sewage also contains soaps and detergents. Food waste may be present from dishwashing, and food quantities may be increased where garbage disposal units are used. In regions where toilet paper is used rather than bidets, that paper is also added to the sewage. Sewage contains macro-pollutants and micro-pollutants, and may also incorporate some municipal solid waste and pollutants from industrial wastewater.

<span class="mw-page-title-main">Environmental impact of pharmaceuticals and personal care products</span> Effects of drugs on the environment

The environmental effect of pharmaceuticals and personal care products (PPCPs) is being investigated since at least the 1990s. PPCPs include substances used by individuals for personal health or cosmetic reasons and the products used by agribusiness to boost growth or health of livestock. More than twenty million tons of PPCPs are produced every year. The European Union has declared pharmaceutical residues with the potential of contamination of water and soil to be "priority substances".[3]

Bioanalysis is a sub-discipline of analytical chemistry covering the quantitative measurement of xenobiotics and biotics in biological systems.

<span class="mw-page-title-main">Laser ablation electrospray ionization</span>

Laser ablation electrospray ionization (LAESI) is an ambient ionization method for mass spectrometry that combines laser ablation from a mid-infrared (mid-IR) laser with a secondary electrospray ionization (ESI) process. The mid-IR laser is used to generate gas phase particles which are then ionized through interactions with charged droplets from the ESI source. LAESI was developed in Professor Akos Vertes lab by Peter Nemes in 2007 and it was marketed commercially by Protea Biosciences, Inc until 2017. Fiber-LAESI for single-cell analysis approach was developed by Bindesh Shrestha in Professor Vertes lab in 2009. LAESI is a novel ionization source for mass spectrometry (MS) that has been used to perform MS imaging of plants, tissues, cell pellets, and even single cells. In addition, LAESI has been used to analyze historic documents and untreated biofluids such as urine and blood. The technique of LAESI is performed at atmospheric pressure and therefore overcomes many of the obstacles of traditional MS techniques, including extensive and invasive sample preparation steps and the use of high vacuum. Because molecules and aerosols are ionized by interacting with an electrospray plume, LAESI's ionization mechanism is similar to SESI and EESI techniques.

<span class="mw-page-title-main">3-HO-PCP</span> Chemical compound

3-Hydroxyphencyclidine (3-HO-PCP) is a dissociative of the arylcyclohexylamine class related to phencyclidine (PCP) that has been sold online as a designer drug.

<span class="mw-page-title-main">Emergency sanitation</span> Management and technical processes required to provide sanitation in emergency situations

Emergency sanitation is the management and technical processes required to provide sanitation in emergency situations. Emergency sanitation is required during humanitarian relief operations for refugees, people affected by natural disasters and internally displaced persons. There are three phases of emergency response: Immediate, short term and long term. In the immediate phase, the focus is on managing open defecation, and toilet technologies might include very basic latrines, pit latrines, bucket toilets, container-based toilets, chemical toilets. The short term phase might also involve technologies such as urine-diverting dry toilets, septic tanks, decentralized wastewater systems. Providing handwashing facilities and management of fecal sludge are also part of emergency sanitation.

Margaret Louise Brandeau is an American management scientist and engineer whose research applies operations research to decision-making in public health, and has made contributions to optimize health care systems. The main focus of her work is on the development of applied mathematical and economic models to support health policy decisions. She is the Coleman F. Fung Professor in the Stanford University School of Engineering, and also holds a courtesy affiliation with the Stanford University School of Medicine.

Wastewater-based epidemiology analyzes wastewater to determine the consumption of, or exposure to, chemicals or pathogens in a population. This is achieved by measuring chemical or biomarkers in wastewater generated by the people contributing to a sewage treatment plant catchment. Wastewater-based epidemiology has been used to estimate illicit drug use in communities or populations, but can be used to measure the consumption of alcohol, caffeine, various pharmaceuticals and other compounds. Wastewater-based epidemiology has also been adapted to measure the load of pathogens such as SARS-CoV-2 in a community. It differs from traditional drug testing, urine or stool testing in that results are population-level rather than individual level. Wastewater-based epidemiology is an interdisciplinary endeavour that draws on input from specialists such as wastewater treatment plant operators, analytical chemists and epidemiologists.

Biobot Analytics is an American biotechnology company that specializes in wastewater-based epidemiology headquartered in Cambridge, Massachusetts. The company analyzes wastewater samples to measure the concentration of various substances, including pathogens, illicit drugs, and other public health indicators. Biobot was founded in 2017 at MIT by computational biologist Mariana Matus and architect Newsha Ghaeli.

References

  1. 1 2 3 4 "Out of sight and out of mind, sewage can actually tell us a lot about health". MIT News. 15 September 2015. Retrieved 2020-08-16.
  2. #<Author:0x00007f10cd9dc3c8>. "A microbial bridge to MIT". The Tech. Retrieved 2020-08-16.{{cite web}}: |last= has generic name (help)CS1 maint: numeric names: authors list (link)
  3. 1 2 García, Matus (2018). Analysis of fecal biomarkers to impact clinical care and public health (Thesis thesis). Massachusetts Institute of Technology. hdl:1721.1/119603.
  4. Matus, Mariana; Duvallet, Claire; Kido Soule, Melissa; Kearney, Sean M.; Endo, Noriko; Ghaeli, Newsha; Brito, Ilana; Ratti, Carlo; Kujawinski, Elizabeth B. (2019-08-07). "24-hour multi-omics analysis of residential sewage reflects human activity and informs public health". doi:10.1101/728022. S2CID   201213324.{{cite journal}}: Cite journal requires |journal= (help)
  5. "Strain of intestinal bacteria can stop high-salt diet from inducing inflammatory response linked to hypertension". medicalxpress.com. Retrieved 2020-03-09.
  6. Wilck, Nicola; Matus, Mariana G.; Kearney, Sean M.; Olesen, Scott W.; Forslund, Kristoffer; Bartolomaeus, Hendrik; Haase, Stefanie; Mähler, Anja; Balogh, András; Markó, Lajos; Vvedenskaya, Olga (2017-11-30). "Salt-responsive gut commensal modulates TH17 axis and disease". Nature. 551 (7682): 585–589. Bibcode:2017Natur.551..585W. doi:10.1038/nature24628. ISSN   0028-0836. PMC   6070150 . PMID   29143823.
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  11. Kuchler, Hannah (May 26, 2019). "Tech start-ups tackle US opioid crisis". Financial Times. Retrieved 2020-03-09.
  12. Poon, Linda (30 April 2018). "Cities Wage a Digital War Against the Opioid Crisis". Bloomberg. Retrieved 2020-03-09.
  13. Kaufman, Rachel. "Sewage May Hold the Key to Tracking Opioid Abuse". Smithsonian Magazine. Retrieved 2020-03-10.
  14. 1 2 Karedes, Drew (24 April 2020). "Robots will detect COVID-19 infection under manholes". WFXT. Retrieved 2020-08-16.
  15. "More Shutdowns Are Avoidable, But The Public Needs To Trust Science, Dr. Fauci Says At Harvard". www.wbur.org. 6 August 2020. Retrieved 2020-08-16.
  16. "Xconomy: Tackling Opioid Crisis, Biobot Wins Top Prize at MIT DesignX Event". Xconomy. 2017-05-18. Retrieved 2020-03-09.
  17. "Biobot Analytics, a Startup Using Sewage to Fight the Opioid Crisis, Raises $2.5M". The Martin Trust Center for MIT Entrepreneurship. Retrieved 2020-03-09.