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The cell is the basic structural and functional unit of life forms. Every cell consists of a cytoplasm enclosed within a membrane, and contains many biomolecules such as proteins, DNA and RNA, as well as many small molecules of nutrients and metabolites. The term comes from the Latin word cellula meaning 'small room'.
Bacillus is a genus of Gram-positive, rod-shaped bacteria, a member of the phylum Bacillota, with 266 named species. The term is also used to describe the shape (rod) of other so-shaped bacteria; and the plural Bacilli is the name of the class of bacteria to which this genus belongs. Bacillus species can be either obligate aerobes which are dependent on oxygen, or facultative anaerobes which can survive in the absence of oxygen. Cultured Bacillus species test positive for the enzyme catalase if oxygen has been used or is present.
Bdellovibrio is a genus of Gram-negative, obligate aerobic bacteria. One of the more notable characteristics of this genus is that members can prey upon other Gram-negative bacteria and feed on the biopolymers, e.g. proteins and nucleic acids, of their hosts. They have two lifestyles: a host-dependent, highly mobile phase, the "attack phase", in which they form "bdelloplasts" in their host bacteria; and a slow-growing, irregularly shaped, host-independent form.
A flagellum is a hairlike appendage that protrudes from certain plant and animal sperm cells, and from a wide range of microorganisms to provide motility. Many protists with flagella are termed as flagellates.
A lichen is a composite organism that arises from algae or cyanobacteria living among filaments of multiple fungi species in a mutualistic relationship. Lichens are important actors in nutrient cycling and act as producers which many higher trophic feeders feed on, such as reindeer, gastropods, nematodes, mites, and springtails. Lichens have properties different from those of their component organisms. They come in many colors, sizes, and forms and are sometimes plant-like, but are not plants. They may have tiny, leafless branches (fruticose); flat leaf-like structures (foliose); grow crust-like, adhering tightly to a surface (substrate) like a thick coat of paint (crustose); have a powder-like appearance (leprose); or other growth forms.
MreB is a protein found in bacteria that has been identified as a homologue of actin, as indicated by similarities in tertiary structure and conservation of active site peptide sequence. The conservation of protein structure suggests the common ancestry of the cytoskeletal elements formed by actin, found in eukaryotes, and MreB, found in prokaryotes. Indeed, recent studies have found that MreB proteins polymerize to form filaments that are similar to actin microfilaments. It has been shown to form multilayer sheets comprising diagonally interwoven filaments in the presence of ATP or GTP.
A coccus is any bacterium or archaeon that has a spherical, ovoid, or generally round shape. Bacteria are categorized based on their shapes into three classes: cocci (spherical-shaped), bacillus (rod-shaped) and spiral. Coccus refers to the shape of the bacteria, and can contain multiple genera, such as staphylococci or streptococci. Cocci can grow in pairs, chains, or clusters, depending on their orientation and attachment during cell division. In contrast to many bacilli-shaped bacteria, most cocci bacteria do not have flagella and are non-motile.
Ziehl–Neelsen staining is a type of acid-fast stain, first introduced by Paul Ehrlich. Ziehl–Neelsen staining is a bacteriological stain used to identify acid-fast organisms, mainly Mycobacteria. It is named for two German doctors who modified the stain: the bacteriologist Franz Ziehl (1859–1926) and the pathologist Friedrich Neelsen (1854–1898).
Microsporidia are a group of spore-forming unicellular parasites. These spores contain an extrusion apparatus that has a coiled polar tube ending in an anchoring disc at the apical part of the spore. They were once considered protozoans or protists, but are now known to be fungi, or a sister group to fungi. These fungal microbes are obligate eukaryotic parasites that use a unique mechanism to infect host cells. They have recently been discovered in a 2017 Cornell study to infect Coleoptera on a large scale. So far, about 1500 of the probably more than one million species are named. Microsporidia are restricted to animal hosts, and all major groups of animals host microsporidia. Most infect insects, but they are also responsible for common diseases of crustaceans and fish. The named species of microsporidia usually infect one host species or a group of closely related taxa. Approximately 10 percent of the species are parasites of vertebrates —several species, most of which are opportunistic, can infect humans, in whom they can cause microsporidiosis.
Nostoc, also known as star jelly, troll’s butter, spit of moon, fallen star, witch's butter, and witch’s jelly, is the most common genus of cyanobacteria found in various environments that may form colonies composed of filaments of moniliform cells in a gelatinous sheath of polysaccharides. Nostoc is a genus of photosynthetic, Gram-negative cyanobacteria that can be found in both terrestrial and aquatic environments. It may also grow symbiotically within the tissues of plants, providing nitrogen to its host through the action of terminally differentiated cells known as heterocysts. Nostoc is a genus that includes many species that are diverse in morphology, habitat distribution, and ecological function. Nostoc can be found in soil, on moist rocks, at the bottom of lakes and springs, and rarely in marine habitats. It may also be found in terrestrial temperate, desert, tropical, or polar environments.
The bacterium, despite its simplicity, contains a well-developed cell structure which is responsible for some of its unique biological structures and pathogenicity. Many structural features are unique to bacteria and are not found among archaea or eukaryotes. Because of the simplicity of bacteria relative to larger organisms and the ease with which they can be manipulated experimentally, the cell structure of bacteria has been well studied, revealing many biochemical principles that have been subsequently applied to other organisms.
Beggiatoa is a genus of Gammaproteobacteria belonging to the order Thiotrichales, in the Pseudomonadota phylum. This genus was one of the first bacteria discovered by Ukrainian botanist Sergei Winogradsky. During his research in Anton de Bary's laboratory of botany in 1887, he found that Beggiatoa oxidized hydrogen sulfide (H2S) as an energy source, forming intracellular sulfur droplets, oxygen is the terminal electron acceptor and CO2 is used as a carbon source. Winogradsky named it in honor of the Italian doctor and botanist Francesco Secondo Beggiato (1806 - 1883), from Venice. Winogradsky referred to this form of metabolism as "inorgoxidation" (oxidation of inorganic compounds), today called chemolithotrophy. These organisms live in sulfur-rich environments such as soil, both marine and freshwater, in the deep sea hydrothermal vents and in polluted marine environments. The finding represented the first discovery of lithotrophy. Two species of Beggiatoa have been formally described: the type species Beggiatoa alba and Beggiatoa leptomitoformis, the latter of which was only published in 2017. This colorless and filamentous bacterium, sometimes in association with other sulfur bacteria (for example the genus Thiothrix), can be arranged in biofilm visible to the naked eye formed by a very long white filamentous mat, the white color is due to the stored sulfur. Species of Beggiatoa have cells up to 200 µm in diameter and they are one of the largest prokaryotes on Earth.
Phyllactinia guttata is a species of fungus in the family Erysiphaceae; the anamorph of this species is Ovulariopsis moricola. A plant pathogen distributed in temperate regions, P. guttata causes a powdery mildew on leaves and stems on a broad range of host plants; many records of infection are from Corylus species, like filbert and hazel. Once thought to be conspecific with Phyllactinia chorisiae, a 1997 study proved that they are in fact separate species.
A bacillus, also called a bacilliform bacterium or often just a rod, is a rod-shaped bacterium or archaeon. Bacilli are found in many different taxonomic groups of bacteria. However, the name Bacillus, capitalized and italicized, refers to a specific genus of bacteria. The name Bacilli, capitalized but not italicized, can also refer to a less specific taxonomic group of bacteria that includes two orders, one of which contains the genus Bacillus. When the word is formatted with lowercase and not italicized, 'bacillus', it will most likely be referring to shape and not to the genus at all. Bacilliform bacteria are also often simply called rods when the bacteriologic context is clear.
Bacterial morphological plasticity refers to changes in the shape and size that bacterial cells undergo when they encounter stressful environments. Although bacteria have evolved complex molecular strategies to maintain their shape, many are able to alter their shape as a survival strategy in response to protist predators, antibiotics, the immune response, and other threats.
Nephromyces is a genus of apicomplexans that are symbionts of the ascidian genus Molgula.
The evolution of bacteria has progressed over billions of years since the Precambrian time with their first major divergence from the archaeal/eukaryotic lineage roughly 3.2-3.5 billion years ago. This was discovered through gene sequencing of bacterial nucleoids to reconstruct their phylogeny. Furthermore, evidence of permineralized microfossils of early prokaryotes was also discovered in the Australian Apex Chert rocks, dating back roughly 3.5 billion years ago during the time period known as the Precambrian time. This suggests that an organism in of the phylum Thermotogota was the most recent common ancestor of modern bacteria.
Kribbia dieselivorans is a species of Gram positive, nonmotile, non-sporeforming bacteria. The bacteria are facultatively anaerobic and mesophilic, and the cells can be irregular rods or coccoid. It was originally isolated from tidal flat sediment collected from Kwangyang, South Korea during a survey for diesel-degrading bacteria. The species name refers to its ability to degrade diesel fuel. K. dieselivorans is the type species of genus Kribbia, and is currently the only species in the genus.
Marihabitans asiaticum is a species of Gram positive, nonmotile, non-sporeforming bacteria. The bacteria are aerobic and mesophilic, and the cells are irregular rods or coccoid. The species was first described in 2008, and it was originally isolated in 2003 from surface seawater collected at the Kesennuma ferry port in Miyagi Prefecture, Japan. The species name refers to the region (Asia) from which it was first isolated. M. asiaticum is the type species of genus Marihabitans, and is currently the only species in the genus.
Ornithinibacter aureus is a species of Gram positive, nonmotile, non-sporeforming bacteria. The bacteria are aerobic and mesophilic, and the cells are irregular rods that form branching hyphae. The species was first described in 2011, and it was originally isolated from surface seawater collected from the South China Sea. The species name is derived from Latin aureus (golden), referring to the yellow-pigmented colonies that form on R2A agar. O. aureus is the type species of genus Ornithinibacter, and is currently the only species in the genus.
References
- ↑ Gray PH, Thornton HG (1928). "Soil bacteria that decompose certain aromatic compounds". Zentralblatt für Bakteriologie, Parasitenkunde, Infektionskrankheiten und Hygiene, Abteilung II. 73: 74–96.
- 1 2 Euzéby, J. P. "List of Prokaryotic Names with Standing in Nomenclature" . Retrieved March 24, 2014.
- 1 2 George M. Garrity: Bergey's Manual of Systematic Bacteriology: Volume 2: The Proteobacteria Part C: The Alpha-, Beta-, Delta-, and Epsilonproteabacteria. 2. Auflage, Springer, New York 2005, ISBN 0-387-24145-0