NACA (gene)

NACA
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 3LKX, 3MCB, 3MCE
Identifiers
Aliases	NACA , NACA1, skNAC, HSD48, NAC-alpha, nascent polypeptide-associated complex alpha subunit, nascent polypeptide associated complex subunit alpha
External IDs	OMIM: 601234; MGI: 106095; HomoloGene: 136025; GeneCards: NACA; OMA:NACA - orthologs
Gene location (Human) Chr. Chromosome 12 (human) [1] Band 12q13.3 Start 56,712,305 bp [1] End 56,731,628 bp [1]
Gene location (Mouse) Chr. Chromosome 10 (mouse) [2] Band 10|10 D3 Start 127,871,444 bp [2] End 127,884,506 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in tendon of biceps brachii skin of arm lactiferous duct epithelium of nasopharynx skin of hip Achilles tendon parietal pleura skin of thigh germinal epithelium caput epididymis Top expressed in ventricular zone epiblast blastocyst ovary embryo lens ganglionic eminence embryo thymus uterus More reference expression data BioGPS More reference expression data
Gene ontology Molecular function DNA binding transcription coactivator activity protein binding Cellular component cytoplasm nucleus nascent polypeptide-associated complex extracellular exosome Biological process transcription, DNA-templated regulation of transcription, DNA-templated protein transport regulation of skeletal muscle fiber development cardiac ventricle development heart trabecula morphogenesis positive regulation of cell proliferation involved in heart morphogenesis viral process skeletal muscle tissue regeneration protein biosynthesis positive regulation of skeletal muscle tissue growth negative regulation of striated muscle cell apoptotic process transport Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 4666 17938 Ensembl ENSG00000196531 ENSMUSG00000061315 UniProt Q13765 P70670 Q60817 RefSeq (mRNA) NM_001113201 NM_001113202 NM_001113203 NM_005594 NM_001320193 NM_001320194 NM_001365896 NM_001113199 NM_001282976 NM_013608 RefSeq (protein) NP_001106672 NP_001106673 NP_001106674 NP_001307122 NP_001307123 NP_005585 NP_001106672 NP_001106673 NP_001106674 NP_001307122 NP_001307123 NP_005585 NP_001106670 NP_001269905 NP_038636 NP_001269905.1 NP_038636.2 Location (UCSC) Chr 12: 56.71 – 56.73 Mb Chr 10: 127.87 – 127.88 Mb PubMed search [3] [4]
Wikidata
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Nascent-polypeptide-associated complex alpha polypeptide, also known as NACA, is a protein which in humans is encoded by the NACA gene. ^{[5] [6] [7]}

Function

NACA prevents short recently synthesized (i.e., nascent) ribosome-associated polypeptides from inappropriate interactions with cytosolic proteins. NACA binds nascent-polypeptide domains emerging from ribosomes unless it contains a signal peptide which is fully exposed. Depletion of NACA from ribosomes carrying nascent polypeptides allows the signal recognition particle (SRP) to crosslink to polypeptides regardless of whether or not they contain signal peptides or not. In the absence of NACA, proteins lacking signal peptides can be mis-translocated into the endoplasmic reticulum. ^{[6] [8]}

The NACA protein is expressed in bone during development and acts as a transcriptional coactivator in conjunction with acidic activators. ^[7]

Interactions

NACA has been shown to interact with BTF3, FADD, ^[9] C-jun, ^[10] and 3 members of taxilin family. ^[11]

References

1. GRCh38: Ensembl release 89: ENSG00000196531 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000061315 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. "Entrez Gene: NACA nascent-polypeptide-associated complex alpha polypeptide".
6. Wiedmann B, Sakai H, Davis TA, Wiedmann M (August 1994). "A protein complex required for signal-sequence-specific sorting and translocation". Nature. 370 (6489): 434–40. Bibcode:1994Natur.370..434W. doi:10.1038/370434a0. PMID   8047162. S2CID   4353902.
7. Yotov WV, St-Arnaud R (February 1996). "Mapping of the human gene for the alpha-NAC/1.9.2 (NACA/1.9.2) transcriptional coactivator to Chromosome 12q23-24.1". Mamm. Genome. 7 (2): 163–4. doi:10.1007/BF03035343. PMID   8835540. S2CID   33088429. Archived from the original on 2000-09-16.
8. Rospert S, Dubaquié Y, Gautschi M (October 2002). "Nascent-polypeptide-associated complex". Cell. Mol. Life Sci. 59 (10): 1632–9. doi:10.1007/PL00012490. PMC   11337418 . PMID   12475173. S2CID   8874233.
9. Stilo R, Liguoro D, di Jeso B, Leonardi A, Vito P (April 2003). "The alpha-chain of the nascent polypeptide-associated complex binds to and regulates FADD function". Biochem. Biophys. Res. Commun. 303 (4): 1034–41. doi:10.1016/S0006-291X(03)00487-X. PMID   12684039.
10. Moreau A, Yotov WV, Glorieux FH, St-Arnaud R (March 1998). "Bone-specific expression of the alpha chain of the nascent polypeptide-associated complex, a coactivator potentiating c-Jun-mediated transcription". Mol. Cell. Biol. 18 (3): 1312–21. doi:10.1128/MCB.18.3.1312. PMC   108844 . PMID   9488446.
11. Yoshida K, Nogami S, Satoh S, Tanaka-Nakadate S, Hiraishi H, Terano A, Shirataki H (May 2005). "Interaction of the taxilin family with the nascent polypeptide-associated complex that is involved in the transcriptional and translational processes". Genes Cells. 10 (5): 465–76. doi: 10.1111/j.1365-2443.2005.00848.x . PMID   15836775. S2CID   19426810.

Further reading

• Wiedmann B, Sakai H, Davis TA, Wiedmann M (1994). "A protein complex required for signal-sequence-specific sorting and translocation". Nature. 370 (6489): 434–40. Bibcode:1994Natur.370..434W. doi:10.1038/370434a0. PMID   8047162. S2CID   4353902.
• Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID   8125298.
• Yotov WV, St-Arnaud R (1996). "Mapping of the human gene for the alpha-NAC/1.9.2 (NACA/1.9.2) transcriptional coactivator to Chromosome 12q23-24.1". Mamm. Genome. 7 (2): 163–4. doi:10.1007/BF03035343. PMID   8835540. S2CID   33088429.
• Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID   9373149.
• Yotov WV, Moreau A, St-Arnaud R (1998). "The alpha chain of the nascent polypeptide-associated complex functions as a transcriptional coactivator". Mol. Cell. Biol. 18 (3): 1303–11. doi:10.1128/MCB.18.3.1303. PMC   108843 . PMID   9488445.
• Moreau A, Yotov WV, Glorieux FH, St-Arnaud R (1998). "Bone-specific expression of the alpha chain of the nascent polypeptide-associated complex, a coactivator potentiating c-Jun-mediated transcription". Mol. Cell. Biol. 18 (3): 1312–21. doi:10.1128/MCB.18.3.1312. PMC   108844 . PMID   9488446.
• Munz B, Wiedmann M, Lochmüller H, Werner S (1999). "Cloning of novel injury-regulated genes. Implications for an important role of the muscle-specific protein skNAC in muscle repair". J. Biol. Chem. 274 (19): 13305–10. doi: 10.1074/jbc.274.19.13305 . PMID   10224091.
• Beatrix B, Sakai H, Wiedmann M (2001). "The alpha and beta subunit of the nascent polypeptide-associated complex have distinct functions". J. Biol. Chem. 275 (48): 37838–45. doi: 10.1074/jbc.M006368200 . PMID   10982809.
• Zhang QH, Ye M, Wu XY, et al. (2001). "Cloning and functional analysis of cDNAs with open reading frames for 300 previously undefined genes expressed in CD34+ hematopoietic stem/progenitor cells". Genome Res. 10 (10): 1546–60. doi:10.1101/gr.140200. PMC   310934 . PMID   11042152.
• Sims RJ, Weihe EK, Zhu L, et al. (2002). "m-Bop, a repressor protein essential for cardiogenesis, interacts with skNAC, a heart- and muscle-specific transcription factor". J. Biol. Chem. 277 (29): 26524–9. doi: 10.1074/jbc.M204121200 . PMID   12011100.
• Kim SH, Shim KS, Lubec G (2002). "Human brain nascent polypeptide-associated complex alpha subunit is decreased in patients with Alzheimer' s disease and Down syndrome". J. Investig. Med. 50 (4): 293–301. PMID   12109594.
• Behrends U, Jandl T, Golbeck A, et al. (2002). "Novel products of the HUD, HUC, NNP-1 and alpha-internexin genes identified by autologous antibody screening of a pediatric neuroblastoma library". Int. J. Cancer. 100 (6): 669–77. doi: 10.1002/ijc.10550 . PMID   12209604. S2CID   35369661.
• Mossabeb R, Seiberler S, Mittermann I, et al. (2002). "Characterization of a novel isoform of alpha-nascent polypeptide-associated complex as IgE-defined autoantigen". J. Invest. Dermatol. 119 (4): 820–9. doi: 10.1046/j.1523-1747.2002.00518.x . PMID   12406326.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.
• Stilo R, Liguoro D, di Jeso B, et al. (2003). "The alpha-chain of the nascent polypeptide-associated complex binds to and regulates FADD function". Biochem. Biophys. Res. Commun. 303 (4): 1034–41. doi:10.1016/S0006-291X(03)00487-X. PMID   12684039.
• Papachristou DJ, Batistatou A, Sykiotis GP, et al. (2003). "Activation of the JNK-AP-1 signal transduction pathway is associated with pathogenesis and progression of human osteosarcomas". Bone. 32 (4): 364–71. doi:10.1016/S8756-3282(03)00026-7. PMID   12689679.
• Hämmerle K, Shayan P, Niemeyer CM, Flotho C (2003). "Expression analysis of alpha-NAC and ANX2 in juvenile myelomonocytic leukemia using SMART polymerase chain reaction and "virtual Northern" hybridization". Cancer Genet. Cytogenet. 142 (2): 149–52. doi:10.1016/S0165-4608(02)00841-5. PMID   12699894.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Al-Shanti N, Steward CG, Garland RJ, Rowbottom AW (2004). "Investigation of alpha nascent polypeptide-associated complex functions in a human CD8(+) T cell ex vivo expansion model using antisense oligonucleotides". Immunology. 112 (3): 397–403. doi:10.1111/j.1365-2567.2004.01893.x. PMC   1782496 . PMID   15196207.
• Ballif BA, Villén J, Beausoleil SA, et al. (2005). "Phosphoproteomic analysis of the developing mouse brain". Mol. Cell. Proteomics. 3 (11): 1093–101. doi: 10.1074/mcp.M400085-MCP200 . PMID   15345747.