S100A13

Last updated
S100A13
Protein S100A13 PDB 1yur.png
Available structures
PDB Ortholog search: PDBe RCSB
Identifiers
Aliases S100A13 , S100 calcium binding protein A13
External IDs OMIM: 601989 MGI: 109581 HomoloGene: 7523 GeneCards: S100A13
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001024210
NM_001024211
NM_001024212
NM_001024213
NM_005979

NM_009113

RefSeq (protein)

NP_001019381
NP_001019382
NP_001019383
NP_001019384
NP_005970

NP_033139

Location (UCSC) Chr 1: 153.62 – 153.63 Mb Chr 3: 90.42 – 90.43 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

S100 calcium-binding protein A13 (S100A13) is a protein that in humans is encoded by the S100A13 gene. [5] [6]

Function

The protein encoded by this gene is a member of the S100 family of proteins containing 2 EF-hand calcium-binding motifs. S100 proteins are localized in the cytoplasm and/or nucleus of a wide range of cells, and involved in the regulation of a number of cellular processes such as cell cycle progression and differentiation. S100 genes include at least 13 members which are located as a cluster on chromosome 1q21. This protein is widely expressed in various types of tissues with a high expression level in thyroid gland. In smooth muscle cells, this protein co-expresses with other family members in the nucleus and in stress fibers, suggesting diverse functions in signal transduction. Multiple alternatively spliced transcript variants encoding the same protein have been found for this gene. [6]

Interactions

S100A13 has been shown to interact with SYT1 [7] [8] and FGF1. [7] [8]

Pathology

Up-regulation of S100A13 was detected in cystic papillary thyroid carcinoma [9] and association of S100A13 expression and chemotherapy resistance was shown in proteomics study of melanoma. [10]

Related Research Articles

<span class="mw-page-title-main">S100 protein</span> Family of vertebrate proteins involved in cell division and inflammation

The S100 proteins are a family of low molecular-weight proteins found in vertebrates characterized by two calcium-binding sites that have helix-loop-helix ("EF-hand-type") conformation. At least 21 different S100 proteins are known. They are encoded by a family of genes whose symbols use the S100 prefix, for example, S100A1, S100A2, S100A3. They are also considered as damage-associated molecular pattern molecules (DAMPs), and knockdown of aryl hydrocarbon receptor downregulates the expression of S100 proteins in THP-1 cells.

<span class="mw-page-title-main">FGF1</span> Protein-coding gene in the species Homo sapiens

Fibroblast growth factor 1, (FGF-1) also known as acidic fibroblast growth factor (aFGF), is a growth factor and signaling protein encoded by the FGF1 gene. It is synthesized as a 155 amino acid polypeptide, whose mature form is a non-glycosylated 17-18 kDa protein. Fibroblast growth factor protein was first purified in 1975, but soon afterwards others using different conditions isolated acidic FGF, Heparin-binding growth factor-1, and Endothelial cell growth factor-1. Gene sequencing revealed that this group was actually the same growth factor and that FGF1 was a member of a family of FGF proteins.

<span class="mw-page-title-main">S100-A4</span> Protein-coding gene in the species Homo sapiens

Protein S100-A4 (S100A4) is a protein that in humans is encoded by the S100A4 gene.

<span class="mw-page-title-main">S100A7</span>

S100 calcium-binding protein A7 (S100A7), also known as psoriasin, is a protein that in humans is encoded by the S100A7 gene.

<span class="mw-page-title-main">S100A2</span> Protein-coding gene in the species Homo sapiens

S100 calcium-binding protein A2 (S100A2) is a protein that in humans is encoded by the S100A2 gene and it is located on chromosome 1q21 with other S100 proteins.

<span class="mw-page-title-main">SYT1</span> Protein-coding gene in the species Homo sapiens

Synaptotagmin-1 is a protein that in humans is encoded by the SYT1 gene.

<span class="mw-page-title-main">S100B</span> Human protein and coding gene

S100 calcium-binding protein B (S100B) is a protein of the S-100 protein family.

<span class="mw-page-title-main">S100A8</span> Protein-coding gene in Homo sapiens

S100 calcium-binding protein A8 (S100A8) is a protein that in humans is encoded by the S100A8 gene. It is also known as calgranulin A.

<span class="mw-page-title-main">S100A9</span> Protein-coding gene in the species Homo sapiens

S100 calcium-binding protein A9 (S100A9) also known as migration inhibitory factor-related protein 14 (MRP14) or calgranulin B is a protein that in humans is encoded by the S100A9 gene.

<span class="mw-page-title-main">S100-A1</span> Protein-coding gene in the species Homo sapiens

Protein S100-A1, also known as S100 calcium-binding protein A1 is a protein which in humans is encoded by the S100A1 gene. S100A1 is highly expressed in cardiac and skeletal muscle, and localizes to Z-discs and sarcoplasmic reticulum. S100A1 has shown promise as an effective candidate for gene therapy to treat post-myocardially infarcted cardiac tissue.

<span class="mw-page-title-main">S100A10</span> Protein-coding gene in the species Homo sapiens

S100 calcium-binding protein A10 (S100A10), also known as p11, is a protein that is encoded by the S100A10 gene in humans and the S100a10 gene in other species. S100A10 is a member of the S100 family of proteins containing two EF-hand calcium-binding motifs. S100 proteins are localized in the cytoplasm and/or nucleus of a wide range of cells. They regulate a number of cellular processes such as cell cycle progression and differentiation. The S100 protein is implicated in exocytosis and endocytosis by reorganization of F-actin.

<span class="mw-page-title-main">S100A6</span> Human protein and coding gene

S100 calcium-binding protein A6 (S100A6) is a protein that in humans is encoded by the S100A6 gene.

<span class="mw-page-title-main">S100A11</span> Protein-coding gene in the species Homo sapiens

S100 calcium-binding protein A11 (S100A11) is a protein that in humans is encoded by the S100A11 gene.

<span class="mw-page-title-main">S100A12</span> Protein-coding gene in the species Homo sapiens

S100 calcium-binding protein A12 (S100A12) is a protein that in humans is encoded by the S100A12 gene. Human S100A12, also known as calgranulin C, was first described in 1995.

<span class="mw-page-title-main">S100P</span> Protein-coding gene in the species Homo sapiens

S100 calcium-binding protein P (S100P) is a protein that in humans is encoded by the S100P gene.

<span class="mw-page-title-main">S100A3</span> Protein-coding gene in the species Homo sapiens

S100 calcium-binding protein A3 (S100A3) is a protein that in humans is encoded by the S100A3 gene.

<span class="mw-page-title-main">STK38</span> Protein-coding gene in the species Homo sapiens

Serine/threonine-protein kinase 38 is an enzyme that in humans is encoded by the STK38 gene.

<span class="mw-page-title-main">S100A5</span> Protein-coding gene in the species Homo sapiens

S100 calcium-binding protein A5 (S100A5) is a protein that in humans is encoded by the S100A5 gene.

<span class="mw-page-title-main">S100A7A</span> Protein-coding gene in the species Homo sapiens

Protein S100-A7A (S100A7A), also known as koebnerisin, is a protein that in humans is encoded by the S100A7A gene.

<span class="mw-page-title-main">S100A14</span> Protein-coding gene in the species Homo sapiens

S100 calcium binding protein A14 (S100A14) is a protein that in humans is encoded by the S100A14 gene.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000189171 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000042312 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Wicki R, Marenholz I, Mischke D, Schäfer BW, Heizmann CW (Dec 1996). "Characterization of the human S100A12 (calgranulin C, p6, CAAF1, CGRP) gene, a new member of the S100 gene cluster on chromosome 1q21". Cell Calcium. 20 (6): 459–64. doi:10.1016/S0143-4160(96)90087-1. PMID   8985590.
  6. 1 2 "Entrez Gene: S100A13 S100 calcium binding protein A13".
  7. 1 2 Mouta Carreira C, LaVallee TM, Tarantini F, Jackson A, Lathrop JT, Hampton B, Burgess WH, Maciag T (Aug 1998). "S100A13 is involved in the regulation of fibroblast growth factor-1 and p40 synaptotagmin-1 release in vitro". The Journal of Biological Chemistry. 273 (35): 22224–31. doi: 10.1074/jbc.273.35.22224 . hdl: 2158/26736 . PMID   9712836.
  8. 1 2 Landriscina M, Bagalá C, Mandinova A, Soldi R, Micucci I, Bellum S, Prudovsky I, Maciag T (Jul 2001). "Copper induces the assembly of a multiprotein aggregate implicated in the release of fibroblast growth factor 1 in response to stress". The Journal of Biological Chemistry. 276 (27): 25549–57. doi: 10.1074/jbc.M102925200 . PMID   11432880.
  9. Dinets A, Pernemalm M, Kjellin H, Sviatoha V, Sofiadis A, Juhlin CC, Zedenius J, Larsson C, Lehtiö J, Höög A (May 2015). "Differential protein expression profiles of cyst fluid from papillary thyroid carcinoma and benign thyroid lesions". PLOS ONE. 10 (5): e0126472. Bibcode:2015PLoSO..1026472D. doi: 10.1371/journal.pone.0126472 . PMC   4433121 . PMID   25978681.
  10. Azimi A, Pernemalm M, Frostvik Stolt M, Hansson J, Lehtiö J, Egyházi Brage S, Hertzman Johansson C (2014). "Proteomics analysis of melanoma metastases: association between S100A13 expression and chemotherapy resistance". British Journal of Cancer. 110 (10): 2489–2495. doi:10.1038/bjc.2014.169. PMC   4021518 . PMID   24722184.

Further reading