SYT1

Last updated
SYT1
Protein SYT1 PDB 1byn.png
Available structures
PDB Ortholog search: PDBe RCSB
Identifiers
Aliases SYT1 , P65, SVP65, SYT, synaptotagmin 1, BAGOS
External IDs OMIM: 185605 MGI: 99667 HomoloGene: 4122 GeneCards: SYT1
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001135805
NM_001135806
NM_001291901
NM_005639

RefSeq (protein)

NP_001129277
NP_001129278
NP_001278830
NP_005630

Location (UCSC) Chr 12: 78.86 – 79.45 Mb Chr 10: 108.33 – 108.85 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Synaptotagmin-1 is a protein that in humans is encoded by the SYT1 gene. [5]

Function

Synaptotagmins are integral membrane proteins of synaptic vesicles thought to serve as sensors for calcium ions (Ca2+) in the process of vesicular trafficking and exocytosis. Calcium ion binding to synaptotagmin I participates in triggering neurotransmitter release at the synapse. [6] [Supplied by OMIM] [7]

SYT1 is the master switch responsible for allowing the human brain to release neurotransmitters. SYT1 senses calcium ion concentrations as low as 10 ppm and subsequently signals the SNARE complex to open fusion pores. [8]

Interactions

SYT1 has been shown to interact with SNAP-25, [9] [10] STX1A [11] [12] and S100A13. [13] [14]

Clinical Significance

Mutations in the SYT1 gene cause a rare neurodevelopmental disorder known as SYT1-associated neurodevelopmental disorder (or Baker-Gordon Syndrome). [15] [16]

Related Research Articles

<span class="mw-page-title-main">FGF1</span> Protein-coding gene in the species Homo sapiens

Fibroblast growth factor 1, (FGF-1) also known as acidic fibroblast growth factor (aFGF), is a growth factor and signaling protein encoded by the FGF1 gene. It is synthesized as a 155 amino acid polypeptide, whose mature form is a non-glycosylated 17-18 kDa protein. Fibroblast growth factor protein was first purified in 1975, but soon afterwards others using different conditions isolated acidic FGF, Heparin-binding growth factor-1, and Endothelial cell growth factor-1. Gene sequencing revealed that this group was actually the same growth factor and that FGF1 was a member of a family of FGF proteins.

<span class="mw-page-title-main">SNAP25</span> Protein-coding gene in the species Homo sapiens

Synaptosomal-Associated Protein, 25kDa (SNAP-25) is a Target Soluble NSF (N-ethylmaleimide-sensitive factor) Attachment Protein Receptor (t-SNARE) protein encoded by the SNAP25 gene found on chromosome 20p12.2 in humans. SNAP-25 is a component of the trans-SNARE complex, which accounts for membrane fusion specificity and directly executes fusion by forming a tight complex that brings the synaptic vesicle and plasma membranes together.

<span class="mw-page-title-main">Synaptotagmin</span>

Synaptotagmins (SYTs) constitute a family of membrane-trafficking proteins that are characterized by an N-terminal transmembrane region (TMR), a variable linker, and two C-terminal C2 domains - C2A and C2B. There are 17 isoforms in the mammalian synaptotagmin family. There are several C2-domain containing protein families that are related to synaptotagmins, including transmembrane (Ferlins, Extended-Synaptotagmin (E-Syt) membrane proteins, and MCTPs) and soluble (RIMS1 and RIMS2, UNC13D, synaptotagmin-related proteins and B/K) proteins. The family includes synaptotagmin 1, a Ca2+ sensor in the membrane of the pre-synaptic axon terminal, coded by gene SYT1.

<span class="mw-page-title-main">C2 domain</span>

A C2 domain is a protein structural domain involved in targeting proteins to cell membranes. The typical version (PKC-C2) has a beta-sandwich composed of 8 β-strands that co-ordinates two or three calcium ions, which bind in a cavity formed by the first and final loops of the domain, on the membrane binding face. Many other C2 domain families don't have calcium binding activity.

<span class="mw-page-title-main">STX1A</span> Protein-coding gene in the species Homo sapiens

Syntaxin-1A is a protein that in humans is encoded by the STX1A gene.

<span class="mw-page-title-main">SNAP23</span> Protein-coding gene in the species Homo sapiens

Synaptosomal-associated protein 23 is a protein that in humans is encoded by the SNAP23 gene. Two alternative transcript variants encoding different protein isoforms have been described for this gene.

<span class="mw-page-title-main">CASK</span> Protein-coding gene in humans

Peripheral plasma membrane protein CASK is a protein that in humans is encoded by the CASK gene. This gene is also known by several other names: CMG 2, calcium/calmodulin-dependent serine protein kinase 3 and membrane-associated guanylate kinase 2. CASK gene mutations are the cause of XL-ID with or without nystagmus and MICPCH, an X-linked neurological disorder.

<span class="mw-page-title-main">STX4</span> Protein-coding gene in the species Homo sapiens

Syntaxin-4 is a protein that in humans is encoded by the STX4 gene.

<span class="mw-page-title-main">VAMP2</span> Protein-coding gene in the species Homo sapiens

Vesicle-associated membrane protein 2 (VAMP2) is a protein that in humans is encoded by the VAMP2 gene.

<span class="mw-page-title-main">ATP2B4</span> Protein-coding gene in the species Homo sapiens

Plasma membrane calcium-transporting ATPase 4 is an enzyme that in humans is encoded by the ATP2B4 gene.

<span class="mw-page-title-main">NRXN1</span> Protein-coding gene in the species Homo sapiens

Neurexin-1-alpha is a protein that in humans is encoded by the NRXN1 gene.

<span class="mw-page-title-main">S100A13</span> Protein-coding gene in the species Homo sapiens

S100 calcium-binding protein A13 (S100A13) is a protein that in humans is encoded by the S100A13 gene.

<span class="mw-page-title-main">STX2</span> Protein-coding gene in the species Homo sapiens

Syntaxin-2, also known as epimorphin, is a protein that in humans is encoded by the STX2 gene.

<span class="mw-page-title-main">RIMS1</span> Gene of the species Homo sapiens

Regulating synaptic membrane exocytosis protein 1 is a protein that in humans is encoded by the RIMS1 gene.

<span class="mw-page-title-main">SYTL2</span> Protein-coding gene in the species Homo sapiens

Synaptotagmin-like 2, also known as SYTL2, is a human gene.

<span class="mw-page-title-main">SYT3</span> Protein-coding gene in the species Homo sapiens

Synaptotagmin-3 is a protein that in humans is encoded by the SYT3 gene.

<span class="mw-page-title-main">SYT9</span> Protein-coding gene in the species Homo sapiens

Synaptotagmin-9 is a protein that in humans is encoded by the SYT9 gene.

<span class="mw-page-title-main">SYT7</span> Protein-coding gene in the species Homo sapiens

Synaptotagmin-7 is a protein that in humans is encoded by the SYT7 gene.

<span class="mw-page-title-main">DOC2B</span> Protein-coding gene in the species Homo sapiens

Double C2-like domain-containing protein beta is a protein that in humans is encoded by the DOC2B gene.

<span class="mw-page-title-main">Syntaxin 3</span> Protein-coding gene in the species Homo sapiens

Syntaxin 3, also known as STX3, is a protein which in humans is encoded by the STX3 gene.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000067715 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000035864 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Perin MS, Johnston PA, Ozcelik T, Jahn R, Francke U, Südhof TC (Jan 1991). "Structural and functional conservation of synaptotagmin (p65) in Drosophila and humans". The Journal of Biological Chemistry. 266 (1): 615–22. doi: 10.1016/S0021-9258(18)52479-0 . PMID   1840599.
  6. Fernández-Chacón R, Königstorfer A, Gerber SH, García J, Matos MF, Stevens CF, Brose N, Rizo J, Rosenmund C, Südhof TC (March 2001). "Synaptotagmin I functions as a calcium regulator of release probability". Nature. 410 (6824): 41–9. doi:10.1038/35065004. PMID   11242035. S2CID   1756258.
  7. "Entrez Gene: SYT1 synaptotagmin I".
  8. Lee HK, Yang Y, Su Z, Hyeon C, Lee TS, Lee HW, Kweon DH, Shin YK, Yoon TY (May 2010). "Dynamic Ca2+-dependent stimulation of vesicle fusion by membrane-anchored synaptotagmin 1". Science. 328 (5979): 760–3. doi:10.1126/science.1187722. PMC   2994549 . PMID   20448186.
  9. Gerona RR, Larsen EC, Kowalchyk JA, Martin TF (Mar 2000). "The C terminus of SNAP25 is essential for Ca(2+)-dependent binding of synaptotagmin to SNARE complexes". The Journal of Biological Chemistry. 275 (9): 6328–36. doi: 10.1074/jbc.275.9.6328 . PMID   10692432.
  10. Zhang X, Kim-Miller MJ, Fukuda M, Kowalchyk JA, Martin TF (May 2002). "Ca2+-dependent synaptotagmin binding to SNAP-25 is essential for Ca2+-triggered exocytosis". Neuron. 34 (4): 599–611. doi: 10.1016/S0896-6273(02)00671-2 . PMID   12062043. S2CID   16768299.
  11. Shao X, Li C, Fernandez I, Zhang X, Südhof TC, Rizo J (Jan 1997). "Synaptotagmin-syntaxin interaction: the C2 domain as a Ca2+-dependent electrostatic switch". Neuron. 18 (1): 133–42. doi: 10.1016/S0896-6273(01)80052-0 . PMID   9010211. S2CID   17947552.
  12. Thomas DM, Ferguson GD, Herschman HR, Elferink LA (Jul 1999). "Functional and biochemical analysis of the C2 domains of synaptotagmin IV". Molecular Biology of the Cell. 10 (7): 2285–95. doi:10.1091/mbc.10.7.2285. PMC   25443 . PMID   10397765.
  13. Mouta Carreira C, LaVallee TM, Tarantini F, Jackson A, Lathrop JT, Hampton B, Burgess WH, Maciag T (Aug 1998). "S100A13 is involved in the regulation of fibroblast growth factor-1 and p40 synaptotagmin-1 release in vitro". The Journal of Biological Chemistry. 273 (35): 22224–31. doi: 10.1074/jbc.273.35.22224 . hdl: 2158/26736 . PMID   9712836.
  14. Landriscina M, Bagalá C, Mandinova A, Soldi R, Micucci I, Bellum S, Prudovsky I, Maciag T (Jul 2001). "Copper induces the assembly of a multiprotein aggregate implicated in the release of fibroblast growth factor 1 in response to stress". The Journal of Biological Chemistry. 276 (27): 25549–57. doi: 10.1074/jbc.M102925200 . PMID   11432880.
  15. Baker K, Gordon SL, Melland H, et al. (2018). "SYT1-associated neurodevelopmental disorder: a case series". Brain. 141 (9): 2576–2591. doi: 10.1093/brain/awy209 . PMC   6113648 . PMID   30107533.
  16. "OMIM entry: Baker-Gordon Syndrome".

Further reading