Streptomyces rapamycinicus

Last updated

Streptomyces rapamycinicus
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Bacteria
Phylum: Actinomycetota
Class: Actinomycetia
Order: Streptomycetales
Family: Streptomycetaceae
Genus: Streptomyces
Species:
S. rapamycinicus
Binomial name
Streptomyces rapamycinicus
Kumar and Goodfellow 2008 [1]
Type strain
ATCC 29253, NRRL 5491 [2]

Streptomyces rapamycinicus is a bacterium species from the genus of Streptomyces which has been isolated from soil from the Easter island. [1] [2] [3] Streptomyces rapamycinicus produces sirolimus. [3] [4] [5]

Contents

See also

Related Research Articles

<span class="mw-page-title-main">Sirolimus</span> Pharmaceutical drug

Sirolimus, also known as rapamycin and sold under the brand name Rapamune among others, is a macrolide compound that is used to coat coronary stents, prevent organ transplant rejection, treat a rare lung disease called lymphangioleiomyomatosis, and treat perivascular epithelioid cell tumor (PEComa). It has immunosuppressant functions in humans and is especially useful in preventing the rejection of kidney transplants. It is a mechanistic target of rapamycin (mTOR) kinase inhibitor that reduces the sensitivity of T cells and B cells to interleukin-2 (IL-2), inhibiting their activity.

<i>Streptomyces</i> Genus of bacteria

Streptomyces is the largest genus of Actinomycetota, and the type genus of the family Streptomycetaceae. Over 700 species of Streptomyces bacteria have been described. As with the other Actinomycetota, streptomycetes are gram-positive, and have very large genomes with high GC content. Found predominantly in soil and decaying vegetation, most streptomycetes produce spores, and are noted for their distinct "earthy" odor that results from production of a volatile metabolite, geosmin. Different strains of the same species may colonize very diverse environments.

<span class="mw-page-title-main">Ascomycin</span> Chemical compound

Ascomycin, also called Immunomycin, FR-900520, FK520, is an ethyl analog of tacrolimus (FK506) with strong immunosuppressant properties. It has been researched for the treatment of autoimmune diseases and skin diseases, and to prevent rejection after an organ transplant.

Streptomyces clavuligerus is a species of Gram-positive bacterium notable for producing clavulanic acid.

<span class="mw-page-title-main">Aminocoumarin</span> Class of antibiotic chemical compounds

Aminocoumarin is a class of antibiotics that act by an inhibition of the DNA gyrase enzyme involved in the cell division in bacteria. They are derived from Streptomyces species, whose best-known representative – Streptomyces coelicolor – was completely sequenced in 2002. The aminocoumarin antibiotics include:

<span class="mw-page-title-main">Crotonyl-CoA carboxylase/reductase</span> Class of enzymes

Crotonyl-CoA carboxylase/reductase (EC 1.3.1.85, CCR, crotonyl-CoA reductase (carboxylating)) is an enzyme with systematic name (2S)-ethylmalonyl-CoA:NADP+ oxidoreductase (decarboxylating). This enzyme catalyses the following chemical reaction

L-lysine cyclodeaminase (EC 4.3.1.28, rapL (gene), fkbL (gene), tubZ (gene), visC (gene)) is an enzyme with systematic name L-lysine ammonia-lyase (cyclizing; ammonia-forming). This enzyme catalyses the following chemical reaction

Streptomyces isolates have yielded the majority of human, animal, and agricultural antibiotics, as well as a number of fundamental chemotherapy medicines. Streptomyces is the largest antibiotic-producing genus of Actinomycetota, producing chemotherapy, antibacterial, antifungal, antiparasitic drugs, and immunosuppressants. Streptomyces isolates are typically initiated with the aerial hyphal formation from the mycelium.

Streptomyces cattleya is a Gram-positive bacterium which makes cephamycin, penicillin and thienamycin. The bacterium expresses a fluorinase enzyme, and the organism has been used to understand the biosynthesis of fluoroacetate and the antibacterial 4-fluoro-L-threonine. The γ-Glu-βes pathway to biosynthesis of non-traditional amino acids β-ethynylserine (βes) and L-propargylglycine (Pra) was first characterized in this species.

Streptomyces albulus is a bacterium species from the genus of Streptomyces. Streptomyces albulus produces acetoxycycloheximide, aciphenol, albanoursin and cycloheximide.

Streptomyces chartreusis is a bacterium species from the genus of Streptomyces which has been isolated from soil in Africa. Streptomyces chartreusis produces N-deacyltunicamycin, elsamicin A, aminoacylase and chartreusin.

Streptomyces exfoliatus is a bacterium species from the genus of Streptomyces which has been isolated from soil. Streptomyces exfoliatus has the ability to degrade poly(3-hydroxyalkanoate). This species produces exfoliatin and exfoliamycin.

Streptomyces griseorubens is a bacterium species from the genus of Streptomyces which has been isolated from soil. Streptomyces griseorubens produces althiomycin. Streptomyces griseorubens produces matamycin and althiomycin.

Streptomyces iranensis is a bacterium species from the genus of Streptomyces which has been isolated from rhizospherical soil in Isfahan in Iran.

Streptomyces lydicus is a bacterium species from the genus of Streptomyces which has been isolated from soil in the United States. Streptomyces lydicus produces actithiazic acid, natamycin, lydimycin, streptolydigin, and 1-deoxygalactonojirimycin. Streptomyces lydicus can be used as an agent against fungal plant pathogens like Fusarium, Pythium, Phytophthora, Rhizoctonia and Verticillum.

Streptomyces mutabilis is a bacterium species from the genus of Streptomyces which has been isolated from soil. Streptomyces mutabilis produces the antibiotic mutalomycin. Streptomyces mutabilis UAE1 has been found to promote plant growth in gray mangroves under greenhouse conditions by producing polyamines putrescine (Put), spermidine (Spd), and spermine (Spm).

Streptomyces tsukubensis is a bacterium species from the genus of Streptomyces which has been isolated from soil in Ibaraki in Japan. Streptomyces tsukubensis produces the immunosuppressant tacrolimus.

Streptomyces viridosporus is a bacterium species from the genus of Streptomyces. Streptomyces viridosporus produces sistomycine and lignin peroxidase. Streptomyces viridosporus can degrade lignin and humic acids. Streptomyces viridosporus also produces moenomycin A, a component of bambermycin.

Streptomyces xinghaiensis is a bacterium species from the genus of Streptomyces which has been isolated from marine sediments from Xinghai Bay near Dalian in China.

Cytochrome P450, family 107, also known as CYP107, is a cytochrome P450 monooxygenase family in bacteria, found to be conserved and highly populated in Streptomyces and Bacillus species. The first gene identified in this family is Cytochrome P450 eryF (CYP107A1) from Saccharopolyspora erythraea. Many enzymes of this family are involved in the synthesis of macrolide antibiotics. The members of this family are widely distributed in Alphaproteobacteria, cyanobacterial, Mycobacterium, Bacillota, and Streptomyces species, which may be due to horizontal gene transfer driven by selection pressure.

References

  1. 1 2 LPSN bacterio.net
  2. 1 2 UniProt
  3. 1 2 Deutsche Sammlung von Mikroorganismen und Zellkulturen
  4. ATCC
  5. Baranasic, D.; Gacesa, R.; Starcevic, A.; Zucko, J.; Blazic, M.; Horvat, M.; Gjuracic, K.; Fujs, S.; Hranueli, D.; Kosec, G.; Cullum, J.; Petkovic, H. (8 August 2013). "Draft Genome Sequence of Streptomyces rapamycinicus Strain NRRL 5491, the Producer of the Immunosuppressant Rapamycin". Genome Announcements. 1 (4): e00581-13–e00581-13. doi:10.1128/genomeA.00581-13. PMC   3738893 . PMID   23929477.

Further reading