TBRG4

TBRG4
Identifiers
Aliases	TBRG4 , CPR2, FASTKD4, transforming growth factor beta regulator 4
External IDs	OMIM: 611325 MGI: 1100868 HomoloGene: 31259 GeneCards: TBRG4
Gene location (Human) Chr. Chromosome 7 (human) [1] Band 7p13 Start 45,100,100 bp [1] End 45,112,047 bp [1]
Gene location (Mouse) Chr. Chromosome 11 (mouse) [2] Band 11|11 A1 Start 6,565,598 bp [2] End 6,576,067 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in gastrocnemius muscle rectum body of stomach minor salivary gland Right adrenal gland right lobe of liver skin of abdomen right lobe of thyroid gland left ventricle right uterine tube Top expressed in primitive streak yolk sac internal carotid artery hair follicle condyle fossa lip duodenum left lobe of liver external carotid artery More reference expression data BioGPS More reference expression data
Gene ontology Molecular function protein kinase activity protein binding RNA binding Cellular component mitochondrion mitochondrial matrix Biological process cellular respiration protein phosphorylation positive regulation of cell population proliferation mRNA metabolic process regulation of mitochondrial mRNA stability mitochondrial mRNA processing Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 9238 21379 Ensembl ENSG00000136270 ENSMUSG00000000384 UniProt Q969Z0 Q91YM4 RefSeq (mRNA) NM_199122 NM_001261834 NM_004749 NM_030900 NM_001130457 NM_134011 NM_001362713 NM_001362714 NM_001362715 NM_001362716 RefSeq (protein) NP_001248763 NP_004740 NP_112162 NP_954573 NP_001123929 NP_598772 NP_001349642 NP_001349643 NP_001349644 NP_001349645 Location (UCSC) Chr 7: 45.1 – 45.11 Mb Chr 11: 6.57 – 6.58 Mb PubMed search [3] [4]
Wikidata
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Transforming growth factor beta regulator 4 (TBRG4), also known as cell cycle progression restoration protein 2 (CPR2) and FAST kinase domain-containing protein 4 (FASTKD4), is a protein that in humans is encoded by the TBRG4 gene on chromosome 7. ^{[5] [6] [7]} This protein is part of the FASTKD family, which is known for regulating the energy balance of mitochondria under stress and cell cycle progression. ^{[8] [9]} TBRG4 is involved in cell proliferation in hematopoiesis and multiple myeloma. ^{[10] [11]}

Structure

TBRG4 shares structural characteristics of the FASTKD family, including an N-terminal mitochondrial targeting domain and three C-terminal domains: two FAST kinase-like domains (FAST_1 and FAST_2) and a RNA-binding domain (RAP). ^{[8] [9]} The mitochondrial targeting domain directs TBRG4 to be imported into the mitochondria. Though the functions of the C-terminal domains are unknown, RAP possibly binds RNA during trans-splicing. ^[8] TBRG4 also contains multiple putative leucine zipper domains. ^[6]

Function

As a member of the FASTKD family, TBRG4 localizes to the mitochondria to modulate their energy balance, especially under conditions of stress. Though ubiquitously expressed in all tissues, TBRG4 appears more abundantly in skeletal muscle, heart muscle, and other tissues enriched in mitochondria. ^[8] TBRG4 also localizes to the bone marrow (BM), where it functions in hematopoiesis by inducing IL-6 and VEGF secretion, which then stimulate cell proliferation and angiogenesis. However, it inhibits immunoglobulin secretions by normal B cells. ^[10]

Clinical significance

The involvement of TBRG4 in hematopoiesis links it to multiple myeloma (MM), which stems from malignant proliferation of plasma cells in the bone marrow. ^[10] High expression of TBRG4 has been linked to enhanced cell proliferation and poorer outcome; thus, downregulation of its expression may contribute to reducing tumor growth by arresting cell cycle progression. ^[11]

References

1. GRCh38: Ensembl release 89: ENSG00000136270 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000000384 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. UniProt: Q969Z0
6. Edwards MC, Liegeois N, Horecka J, DePinho RA, Sprague GF, Tyers M, Elledge SJ (Nov 1997). "Human CPR (cell cycle progression restoration) genes impart a Far- phenotype on yeast cells". Genetics. 147 (3): 1063–76. doi:10.1093/genetics/147.3.1063. PMC   1208234 . PMID   9383053.
7. "Entrez Gene: TBRG4 transforming growth factor beta regulator 4".
8. Simarro M, Gimenez-Cassina A, Kedersha N, Lazaro JB, Adelmant GO, Marto JA, Rhee K, Tisdale S, Danial N, Benarafa C, Orduña A, Anderson P (Oct 2010). "Fast kinase domain-containing protein 3 is a mitochondrial protein essential for cellular respiration". Biochemical and Biophysical Research Communications. 401 (3): 440–6. doi:10.1016/j.bbrc.2010.09.075. PMC   2963690 . PMID   20869947.
9. Yeung KT, Das S, Zhang J, Lomniczi A, Ojeda SR, Xu CF, Neubert TA, Samuels HH (Jun 2011). "A novel transcription complex that selectively modulates apoptosis of breast cancer cells through regulation of FASTKD2". Molecular and Cellular Biology. 31 (11): 2287–98. doi:10.1128/MCB.01381-10. PMC   3133243 . PMID   21444724.
10. Sevcikova S, Paszekova H, Besse L, Sedlarikova L, Kubaczkova V, Almasi M, Pour L, Hajek R (Apr 2015). "Extramedullary relapse of multiple myeloma defined as the highest risk group based on deregulated gene expression data" (PDF). Biomedical Papers of the Medical Faculty of the University Palacký, Olomouc, Czechoslovakia. 159 (2): 288–93. doi: 10.5507/bp.2015.014 . PMID   25877407.
11. Sarasquete ME, Martínez-López J, Chillón MC, Alcoceba M, Corchete LA, Paiva B, Puig N, Sebastián E, Jiménez C, Mateos MV, Oriol A, Rosiñol L, Palomera L, Teruel AI, González Y, Lahuerta JJ, Bladé J, Gutiérrez NC, Fernández-Redondo E, González M, San Miguel JF, García-Sanz R (Oct 2013). "Evaluating gene expression profiling by quantitative polymerase chain reaction to develop a clinically feasible test for outcome prediction in multiple myeloma". British Journal of Haematology. 163 (2): 223–34. doi: 10.1111/bjh.12519 . PMID   23952215. S2CID   207081358.

Further reading

• Maruyama K, Sugano S (Jan 1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID   8125298.
• Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, Suyama A, Sugano S (Oct 1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID   9373149.
• Nagase T, Ishikawa K, Suyama M, Kikuno R, Hirosawa M, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (Feb 1999). "Prediction of the coding sequences of unidentified human genes. XIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Research. 6 (1): 63–70. doi: 10.1093/dnares/6.1.63 . PMID   10231032.
• Simpson JC, Wellenreuther R, Poustka A, Pepperkok R, Wiemann S (Sep 2000). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Reports. 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC   1083732 . PMID   11256614.
• Rival-Gervier S, Thépot D, Jolivet G, Houdebine LM (May 2003). "Pig whey acidic protein gene is surrounded by two ubiquitously expressed genes". Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression. 1627 (1): 7–14. doi:10.1016/s0167-4781(03)00051-4. PMID   12759187.
• Beausoleil SA, Villén J, Gerber SA, Rush J, Gygi SP (Oct 2006). "A probability-based approach for high-throughput protein phosphorylation analysis and site localization". Nature Biotechnology. 24 (10): 1285–92. doi:10.1038/nbt1240. PMID   16964243. S2CID   14294292.
• Ewing RM, Chu P, Elisma F, Li H, Taylor P, Climie S, McBroom-Cerajewski L, Robinson MD, O'Connor L, Li M, Taylor R, Dharsee M, Ho Y, Heilbut A, Moore L, Zhang S, Ornatsky O, Bukhman YV, Ethier M, Sheng Y, Vasilescu J, Abu-Farha M, Lambert JP, Duewel HS, Stewart II, Kuehl B, Hogue K, Colwill K, Gladwish K, Muskat B, Kinach R, Adams SL, Moran MF, Morin GB, Topaloglou T, Figeys D (2007). "Large-scale mapping of human protein-protein interactions by mass spectrometry". Molecular Systems Biology. 3 (1): 89. doi:10.1038/msb4100134. PMC   1847948 . PMID   17353931.