TRIM11

TRIM11
Identifiers
Aliases	TRIM11 , BIA1, RNF92, tripartite motif containing 11
External IDs	OMIM: 607868 MGI: 2137355 HomoloGene: 14225 GeneCards: TRIM11
Gene location (Human) Chr. Chromosome 1 (human) [1] Band 1q42.13 Start 228,393,673 bp [1] End 228,406,835 bp [1]
Gene location (Mouse) Chr. Chromosome 11 (mouse) [2] Band 11|11 B1.3 Start 58,868,919 bp [2] End 58,882,284 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in cerebellar hemisphere oocyte spleen blood cerebellar vermis monocyte putamen nucleus accumbens caudate nucleus pancreatic ductal cell Top expressed in secondary oocyte spermatocyte corneal stroma thymus atrium seminiferous tubule entorhinal cortex interventricular septum blood proximal tubule More reference expression data BioGPS n/a
Gene ontology Molecular function ubiquitin-protein transferase activity zinc ion binding transcription factor binding protein binding protein domain specific binding ubiquitin protein ligase activity metal ion binding transferase activity Cellular component cytoplasm intracellular anatomical structure nucleus cytosol Biological process negative regulation of neurogenesis innate immune response negative regulation of transcription, DNA-templated defense response to virus protein ubiquitination negative regulation of viral transcription negative regulation of viral entry into host cell positive regulation of viral entry into host cell Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 81559 94091 Ensembl ENSG00000154370 ENSMUSG00000020455 UniProt Q96F44 Q99PQ2 RefSeq (mRNA) NM_145214 NM_001290988 NM_053168 RefSeq (protein) NP_660215 NP_001277917 NP_444398 Location (UCSC) Chr 1: 228.39 – 228.41 Mb Chr 11: 58.87 – 58.88 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Tripartite motif-containing protein 11 is a protein found in humans that is encoded by the TRIM11 gene. ^{[5] [6]}

The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. This protein localizes to the nucleus and the cytoplasm. Its function has not been identified. ^[6]

References

1. GRCh38: Ensembl release 89: ENSG00000154370 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000020455 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Reymond A, Meroni G, Fantozzi A, Merla G, Cairo S, Luzi L, Riganelli D, Zanaria E, Messali S, Cainarca S, Guffanti A, Minucci S, Pelicci PG, Ballabio A (May 2001). "The tripartite motif family identifies cell compartments". EMBO J. 20 (9): 2140–51. doi:10.1093/emboj/20.9.2140. PMC   125245 . PMID   11331580.
6. "Entrez Gene: TRIM11 tripartite motif-containing 11".

Further reading

• Ishikawa H, Tachikawa H, Miura Y, Takahashi N (2006). "TRIM11 binds to and destabilizes a key component of the activator-mediated cofactor complex (ARC105) through the ubiquitin-proteasome system". FEBS Lett. 580 (20): 4784–92. doi: 10.1016/j.febslet.2006.07.066 . PMID   16904669.
• Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID   16189514. S2CID   4427026.
• Cooper ST, Hanson IM (2006). "A screen for proteins that interact with PAX6: C-terminal mutations disrupt interaction with HOMER3, DNCL1 and TRIM11". BMC Genet. 6: 43. doi:10.1186/1471-2156-6-43. PMC   1208879 . PMID   16098226.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC   528928 . PMID   15489334.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi: 10.1038/ng1285 . PMID   14702039.
• Niikura T, Hashimoto Y, Tajima H, et al. (2003). "A tripartite motif protein TRIM11 binds and destabilizes Humanin, a neuroprotective peptide against Alzheimer's disease-relevant insults". Eur. J. Neurosci. 17 (6): 1150–8. doi:10.1046/j.1460-9568.2003.02553.x. PMID   12670303. S2CID   1345339.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi: 10.1073/pnas.242603899 . PMC   139241 . PMID   12477932.