Xanthobacter autotrophicus

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Xanthobacter autotrophicus
Scientific classification
Domain:
Phylum:
Class:
Order:
Family:
Genus:
Species:
X. autotrophicus
Binomial name
Xanthobacter autotrophicus
Wiegel et al. 1978 [1]
Type strain
7C, ATCC 35674, BCRC 12235, CCRC 12235, CIP 105431, DSM 432, IAM 12579, IAM 12636, JCM 1202, LMG 7043, NBRC 102463, NCAIM B.01945, NCIB 10809, NCIMB 10809, NRRL B-14836, Siebert 7C [2]
Synonyms

Corynebacterium autotrophicum [3] [4]

Xanthobacter autotrophicus is a Gram-negative, aerobic, pleomorphic and nitrogen-fixing bacterium from the family of Xanthobacteraceae which has been isolated from black pool sludge in Germany. [1] [4] [5] [6] [7] Xanthobacter autotrophicus can utilize 1,2-dichloroethane, methanol and propane. [3] [7] [8] [9]

Contents

Further reading

Related Research Articles

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2
), which has a strong triple covalent bond, is converted into ammonia (NH
3
) or related nitrogenous compounds, typically in soil or aquatic systems but also in industry. The nitrogen in air is molecular dinitrogen, a relatively nonreactive molecule that is metabolically useless to all but a few microorganisms. Biological nitrogen fixation or diazotrophy is an important microbe-mediated process that converts dinitrogen (N2) gas to ammonia (NH3) using the nitrogenase protein complex (Nif).

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<span class="mw-page-title-main">Methane monooxygenase</span> Class of enzymes

Methane monooxygenase (MMO) is an enzyme capable of oxidizing the C-H bond in methane as well as other alkanes. Methane monooxygenase belongs to the class of oxidoreductase enzymes.

<span class="mw-page-title-main">Aryldialkylphosphatase</span>

Aryldialkylphosphatase is a metalloenzyme that hydrolyzes the triester linkage found in organophosphate insecticides:

<i>Rhodopseudomonas palustris</i> Species of bacterium

Rhodopseudomonas palustris is a rod-shaped, Gram-negative purple nonsulfur bacterium, notable for its ability to switch between four different modes of metabolism.

The Xanthobacteraceae are a family of bacteria that includes Azorhizobium, a genus of rhizobia. Xanthobacteraceae bacteria are diverse and Gram-negative, rod-shaped, and may be motile or non-motile depending on the specific bacteria. Their cells range in size from 0.4–1.0 × 0.8–6 µm, but when grown in the presence of alcohol as the sole carbon source, they can reach up to 10 µm in length. These bacteria do not form spores and have opaque, slimy colonies that appear slightly yellow due to the presence of zeaxanthin dirhamnoside.

5-nitrosalicylate dioxygenase (EC 1.13.11.64, naaB (gene)) is an enzyme with systematic name 5-nitrosalicylate:oxygen 1,2-oxidoreductase (decyclizing). This enzyme catalyses the following chemical reaction

<span class="mw-page-title-main">Plastisphere</span> Plastic debris suspended in water and organisms which live in it

The plastisphere consists of ecosystems that have evolved to live in human-made plastic environments. All plastic accumulated in marine ecosystems serves as a habitat for various types of microorganisms, with the most notable contaminant being microplastics. There are an estimate of about 51 trillion microplastics floating in the oceans. Relating to the plastisphere, over 1,000 different species of microbes are able to inhabit just one of these 5mm pieces of plastic.

Streptomyces badius is a bacterium species from the genus of Streptomyces which has been isolated from soil in Kaukasus in Russia. Streptomyces badius produces cutinase. Streptomyces badius can metabolize quinoxaline.

Streptomyces chromofuscus is a bacterium species from the genus of Streptomyces which has been isolated from soil. Streptomyces chromofuscus produces phospholipase D, herboxidiene, pentalenolactone O and carazostatins.

Ancylobacter aquaticus is a bacterium from the family of Xanthobacteraceae which has been isolated from lake water in Copenhagen in Denmark. Ancylobacter aquaticus can degrade 1,2-dichloroethane and produces haloalkane dehalogenase.

Labrys portucalensis is a Gram-negative, rod-shaped, non-motile, non-spore-forming and aerobic bacteria from the family Xanthobacteraceae which has been isolated from polluted soil in Estarreja in Portugal. Labrys portucalensis has the ability to degrade fluorobenzene.

Xanthobacter agilis is a dinitrogen-fixing, non-pleomorphic hydrogen-oxidizing and motile bacteria from the family of Xanthobacteraceae which has been isolated from a lake near Neuchâtel in Switzerland. Xanthobacter agilis produces o-phthalyl amidase.

Xanthobacter flavus is a Gram-negative, nitrogen-fixing and facultatively autotrophic bacteria from the family of Xanthobacteraceae which has been isolated from turf podsol soil in Russia. Xanthobacter flavus has the ability to degrade phenol, oxalate and 1,4-dichlorobenzene.

Xanthobacter tagetidis is a bacterium from the family of Xanthobacteraceae which has been isolated from soil from Root balls around the plant Tagetes patula in the United Kingdom. Xanthobacter tagetidis has the ability to grow on substituted thiophenes.

Streptomyces viridosporus is a bacterium species from the genus of Streptomyces. Streptomyces viridosporus produces sistomycine and lignin peroxidase. Streptomyces viridosporus can degrade lignin and humic acids. Streptomyces viridosporus also produces moenomycin A, a component of bambermycin.

Paenarthrobacter aurescens is a bacterium species from the genus Paenarthrobacter . Paenarthrobacter aurescens produces nitrilase and L-N-carbamoylase. Paenarthrobacter aurescens has a low GC-content and has the ability to utilize anethole.

<i>Paenarthrobacter nicotinovorans</i> Species of bacterium

Paenarthrobacter nicotinovorans is a Gram-positive and aerobic bacterium species from the genus Paenarthrobacter. This bacterium has the ability to degrade atrazine, nicotine, and creatine. and produces nicotine dehydrogenase

Methylosinus trichosporium is an obligate aerobic and methane-oxidizing bacterium species from the genus of Methylosinus. Its native habitat is generally in the soil, but the bacteria has been isolated from fresh water sediments and groundwater as well. Because of this bacterium's ability to oxidize methane, M. trichosporium has been popular for identifying both the structure and function of enzymes involved with methane oxidation since it was first isolated in 1970 by Roger Whittenbury and colleagues. Since its discovery, M. trichosporium and its soluble monooxygenase enzyme have been studied in detail to see if the bacterium could help in bioremediation treatments.

Hydrocarbonoclastic bacteria are a heterogeneous group of prokaryotes which can degrade and utilize hydrocarbon compounds as source of carbon and energy. Despite being present in most of environments around the world, several of these specialized bacteria live in the sea and have been isolated from polluted seawater.

References

  1. 1 2 LPSN lpsn.dsmz.de
  2. Straininfo of Xanthobacter autotrophicus
  3. 1 2 UniProt
  4. 1 2 Ed.: Stanley Falkow (2006). Proteobacteria : Alpha and Beta subclasses (3. ed.). New York, NY: Springer. ISBN   0-387-25495-1.
  5. Janssen, Martin H. Agteren, Sytze Keuning, Dick B. (1998). Handbook on Biodegradation and Biological Treatment of Hazardous Organic Compounds. Dordrecht: Springer Netherlands. ISBN   94-015-9062-1.{{cite book}}: CS1 maint: multiple names: authors list (link)
  6. Schrautemeier, Bernhard (October 1981). "The role of ferredoxin in the nitrogen-fixing hydrogen bacterium". FEMS Microbiology Letters. 12 (2): 153–157. doi: 10.1111/j.1574-6968.1981.tb07631.x .
  7. 1 2 Deutsche Sammlung von Mikroorganismen und Zellkulturen
  8. Klassen, volume editors, Friedhelm Meinhardt, Roland (2007). Microbial linear plasmids (Online-Ausg. ed.). New York: Berlin. ISBN   978-3-540-72025-6.{{cite book}}: |first1= has generic name (help)CS1 maint: multiple names: authors list (link)
  9. al.], edited by C. Marjorie Aelion ... [et (2010). Environmental isotopes in biodegradation and bioremediation. Boca Raton, Florida: CRC Press. ISBN   978-1-4200-1261-3.{{cite book}}: |first1= has generic name (help)