CNTNAP2

Last updated
CNTNAP2
Identifiers
Aliases CNTNAP2 , AUTS15, CASPR2, CDFE, NRXN4, PTHSL1, contactin associated protein-like 2, contactin associated protein like 2, contactin associated protein 2
External IDs OMIM: 604569; MGI: 1914047; HomoloGene: 69159; GeneCards: CNTNAP2; OMA:CNTNAP2 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_014141

NM_001004357
NM_025771

RefSeq (protein)

NP_054860

NP_001004357
NP_080047

Location (UCSC) Chr 7: 146.12 – 148.42 Mb Chr 6: 45.04 – 47.28 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

Contactin-associated protein-like 2 is a protein that in humans is encoded by the CNTNAP2 gene. [5] [6] [7]

Contents

This gene encodes a member of the neurexin family which functions in the vertebrate nervous system as cell adhesion molecules and receptors. This protein, like other neurexin proteins, contains epidermal growth factor repeats and laminin G domains. In addition, it includes an F5/8 type C domain, discoidin/neuropilin- and fibrinogen-like domains, thrombospondin N-terminal-like domains and a putative PDZ binding site. This protein is localized at the juxtaparanodes of myelinated axons and associated with potassium channels. It may play a role in the local differentiation of the axon into distinct functional subdomains. This gene encompasses almost 1.6% of chromosome 7 and is one of the largest genes in the human genome. [8] It may represent a positional candidate gene for the DFNB13 form of nonsyndromic deafness. [7]

Clinical significance

CNTNAP2 has been associated with autism spectrum disorder but accounts for very few cases. [9] [10] [11] A large study concluded it is unlikely to be a primary risk gene for psychiatric disorders. [12] CNTNAP2 may also be related to a disorder called specific language impairment. [13]

Homozygous and compound heterozygous mutations in CNTNAP2 result in a disorder that resembles Pitt–Hopkins syndrome. [14] [15]

Interactions

CNTNAP2 has been shown to interact with CNTN2. [16]

See also

Related Research Articles

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<span class="mw-page-title-main">CASPR</span> Protein found in humans

CASPR also known as Contactin associated protein 1, Paranodin and CASPR1 is a protein that in humans is encoded by the CNTNAP1 gene. CASPR is a part of the neurexin family of proteins, hence its another name "Neurexin IV". CASPR is a membrane protein found in the neuronal membrane in the paranodal section of the axon[[]] in myelinated neurons, between the Nodes of Ranvier containing Na+ channels, and juxtaparanode, which contains K+ channels. During myelination, caspr associates with contactin in a cis complex, though its precise role in myelination is not yet understood.

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References

  1. 1 2 3 ENSG00000278728 GRCh38: Ensembl release 89: ENSG00000174469, ENSG00000278728 Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000039419 Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Poliak S, Gollan L, Martinez R, Custer A, Einheber S, Salzer JL, Trimmer JS, Shrager P, Peles E (December 1999). "Caspr2, a new member of the neurexin superfamily, is localized at the juxtaparanodes of myelinated axons and associates with K+ channels". Neuron. 24 (4): 1037–47. doi: 10.1016/S0896-6273(00)81049-1 . PMID   10624965. S2CID   12444497.
  6. Nagase T, Ishikawa K, Suyama M, Kikuno R, Hirosawa M, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (December 1998). "Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Research. 5 (6): 355–64. doi: 10.1093/dnares/5.6.355 . PMID   10048485.
  7. 1 2 "Entrez Gene: CNTNAP2 contactin associated protein-like 2".
  8. Helmrich A, Ballarino M, Tora L (December 2011). "Collisions between replication and transcription complexes cause common fragile site instability at the longest human genes" (PDF). Molecular Cell. 44 (6): 966–77. doi: 10.1016/j.molcel.2011.10.013 . PMID   22195969.
  9. Alarcón M, Abrahams BS, Stone JL, Duvall JA, Perederiy JV, Bomar JM, Sebat J, Wigler M, Martin CL, Ledbetter DH, Nelson SF, Cantor RM, Geschwind DH (January 2008). "Linkage, association, and gene-expression analyses identify CNTNAP2 as an autism-susceptibility gene". American Journal of Human Genetics. 82 (1): 150–9. doi:10.1016/j.ajhg.2007.09.005. PMC   2253955 . PMID   18179893. Archived from the original on 2008-01-16.
  10. Arking DE, Cutler DJ, Brune CW, Teslovich TM, West K, Ikeda M, Rea A, Guy M, Lin S, Cook EH, Chakravarti A (January 2008). "A common genetic variant in the neurexin superfamily member CNTNAP2 increases familial risk of autism". American Journal of Human Genetics. 82 (1): 160–4. doi:10.1016/j.ajhg.2007.09.015. PMC   2253968 . PMID   18179894. Archived from the original on 2008-01-16.
  11. Bakkaloglu B, O'Roak BJ, Louvi A, Gupta AR, Abelson JF, Morgan TM, Chawarska K, Klin A, Ercan-Sencicek AG, Stillman AA, Tanriover G, Abrahams BS, Duvall JA, Robbins EM, Geschwind DH, Biederer T, Gunel M, Lifton RP, State MW (January 2008). "Molecular cytogenetic analysis and resequencing of contactin associated protein-like 2 in autism spectrum disorders". American Journal of Human Genetics. 82 (1): 165–73. doi:10.1016/j.ajhg.2007.09.017. PMC   2253974 . PMID   18179895. Archived from the original on 2008-01-16.
  12. Toma, Claudio; Pierce, Kerrie D.; Shaw, Alex D.; Heath, Anna; Mitchell, Philip B.; Schofield, Peter R.; Fullerton, Janice M. (December 2018). "Comprehensive cross-disorder analyses of CNTNAP2 suggest it is unlikely to be a primary risk gene for psychiatric disorders". PLOS Genetics. 14 (12): e1007535. doi: 10.1371/journal.pgen.1007535 . ISSN   1553-7404. PMC   6324819 . PMID   30586385.
  13. Vernes SC, Newbury DF, Abrahams BS, Winchester L, Nicod J, Groszer M, Alarcón M, Oliver PL, Davies KE, Geschwind DH, Monaco AP, Fisher SE (November 2008). "A functional genetic link between distinct developmental language disorders". The New England Journal of Medicine. 359 (22): 2337–45. doi:10.1056/NEJMoa0802828. PMC   2756409 . PMID   18987363.
  14. Peippo M, Ignatius J (April 2012). "Pitt-Hopkins Syndrome". Molecular Syndromology. 2 (3–5): 171–180. doi:10.1159/000335287. PMC   3366706 . PMID   22670138.
  15. Zweier C, de Jong EK, Zweier M, Orrico A, Ousager LB, Collins AL, et al. (November 2009). "CNTNAP2 and NRXN1 are mutated in autosomal-recessive Pitt-Hopkins-like mental retardation and determine the level of a common synaptic protein in Drosophila". American Journal of Human Genetics. 85 (5): 655–66. doi:10.1016/j.ajhg.2009.10.004. PMC   2775834 . PMID   19896112.
  16. Traka M, Goutebroze L, Denisenko N, Bessa M, Nifli A, Havaki S, Iwakura Y, Fukamauchi F, Watanabe K, Soliven B, Girault JA, Karagogeos D (September 2003). "Association of TAG-1 with Caspr2 is essential for the molecular organization of juxtaparanodal regions of myelinated fibers". The Journal of Cell Biology. 162 (6): 1161–72. doi:10.1083/jcb.200305078. PMC   2172849 . PMID   12975355.

Further reading