DNAJC30

DNAJC30
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 2YUA
Identifiers
Aliases	DNAJC30 , WBSCR18, DnaJ heat shock protein family (Hsp40) member C30, MC1DN38, LHONAR
External IDs	OMIM: 618202; MGI: 1913364; HomoloGene: 36428; GeneCards: DNAJC30; OMA:DNAJC30 - orthologs
Gene location (Human) Chr. Chromosome 7 (human) [1] Band 7q11.23 Start 73,680,918 bp [1] End 73,683,453 bp [1]
Gene location (Mouse) Chr. Chromosome 5 (mouse) [2] Band 5|5 G2 Start 135,093,056 bp [2] End 135,094,716 bp [2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in tibialis anterior muscle pancreatic ductal cell mucosa of ileum endothelial cell myocardium of left ventricle skin of arm pons deltoid muscle cardiac muscle tissue of right atrium right adrenal gland Top expressed in proximal tubule right kidney muscle of thigh muscle tissue striatum of neuraxis human kidney skeletal muscle tissue quadriceps femoris muscle urinary bladder heart More reference expression data BioGPS n/a
Gene ontology Molecular function protein binding Cellular component cytosol mitochondrial inner membrane mitochondrion membrane integral component of membrane Biological process brain development regulation of mitochondrial ATP synthesis coupled proton transport ATP biosynthetic process Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 84277 66114 Ensembl ENSG00000176410 ENSMUSG00000061118 UniProt Q96LL9 P59041 RefSeq (mRNA) NM_032317 NM_025362 RefSeq (protein) NP_115693 NP_079638 Location (UCSC) Chr 7: 73.68 – 73.68 Mb Chr 5: 135.09 – 135.09 Mb PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

DnaJ homolog subfamily C member 30 (DNAJC30), also known as Williams Beuren syndrome chromosome region 18 protein (WBSCR18), is a protein that in humans is encoded by the DNAJC30 gene. This intronless gene encodes a member of the DNAJ molecular chaperone homology domain-containing protein family. This gene is deleted in Williams syndrome, a multisystem developmental disorder caused by the deletion of contiguous genes at 7q11.23. ^[5]

Structure

The DNAJC30 gene is an intronless gene composed of only one exon, with the chromosome location 7q11.23 in humans. ^[5] Its open reading frame (ORF) consists of 681 bp in the human cDNA and 660 bp in the mouse cDNA, which encode proteins of 226 and 219 residues, respectively. They are members of the DNAJ molecular chaperone homology domain-containing protein family. ^[6]

Function

DNAJC30 is expressed in many tissues, including the brain, heart, kidney, liver, lung, spleen, stomach, and testis, though no transcripts were found in colon, small intestine, and muscle. ^[6] This protein has been found to localize to the cytosol and mitochondria of cells. ^[7] Though its exact biological function has yet to be elucidated, the centromeric location of DNAJC30 on the chromosome has led Merla et al. to postulate that it may contribute to functions such as subtle defects in cognition, transient hypercalcemia, and gastrointestinal problems experienced by Williams Beuren syndrome patients. ^[6] A recent study found that DNAJC30 functionally links to the mitochondrial ATP synthase and influences brain development which proves the involvement in Williams Beuren syndrome. ^[8]

Clinical significance

This gene is one of several contiguous genes located at 7q11.23 deleted in Williams Beuren syndrome, the others including: elastin, FKBP6, FZD9 (FZD3), BAZ1B (WSTF, WBSCR9), BCL7B, TBL2 (WS-βTRP), WBSCR14 (WS-bHLH), STX1A, CLDN3 (CPETR2, RVP1), CLDN4 (CPETR1), LIMK1, EIF4H (WBSCR1), WBSCR15 (WBSCR5), RFC2, CYLN2 (CLIP-115, WBSCR4, WBSCR3), GTF2IRD1 (WBSCR11, GTF3), and GTF2I (BAP135, SPIN). Williams Beuren syndrome is a neurodevelopmental disorder characterized by congenital heart and vascular disease, hypertension, infantile hypercalcemia, dental abnormalities, dysmorphic facial features, intellectual disability, premature aging of the skin, and unique cognitive and personality profiles. While haploinsufficiency of elastin is known to cause the cardiovascular deficiencies, the roles of the other 24-26 genes in the deleted region, including DNAJC30, have yet to be confirmed. ^[6]

References

1. GRCh38: Ensembl release 89: ENSG00000176410 – Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000061118 – Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. "DnaJ heat shock protein family (Hsp40) member C30 - Homo sapiens". NCBI. Retrieved 2017-09-19.
6. Merla G, Ucla C, Guipponi M, Reymond A (May 2002). "Identification of additional transcripts in the Williams-Beuren syndrome critical region". Hum. Genet. 110 (5): 429–38. doi:10.1007/s00439-002-0710-x. PMID   12073013. S2CID   29964959.
7. "DnaJ homolog subfamily C member 30 - Homo sapiens". Uniprot. Retrieved 2017-09-18.
8. Tebbenkamp AT, Varela L, Choi J, Paredes MI, Giani AM, Song JE, et al. (November 2018). "The 7q11.23 Protein DNAJC30 Interacts with ATP Synthase and Links Mitochondria to Brain Development". Cell. 175 (4): 1088–1104.e23. doi:10.1016/j.cell.2018.09.014. PMC   6459420 . PMID   30318146.

Further reading

This article incorporates text from the United States National Library of Medicine, which is in the public domain.