Hyaloperonospora

Last updated

Hyaloperonospora
Hyaloperonospora brassicae.jpg
Hyaloperonospora brassicae on cabbage
Scientific classification Red Pencil Icon.png
Clade: SAR
Phylum: Oomycota
Order: Peronosporales
Family: Peronosporaceae
Genus: Hyaloperonospora
Constant.

Hyaloperonospora is a genus of oomycete, obligate, plant pathogens that was originally considered to be part of Peronospora. [1] Species in this group produce a disease called downy mildew and can infect many important crops. [1] From the 19 downy mildew producing genera, Hyaloperonospora has been grouped with Perofascia in the brassicolous downy mildews. [1] In the group of downy mildews, Hyaloperonospora is the third biggest genus. [1] The most famous species in the genus is the Hyaloperonospora parasitica, or also known as Hyaloperonospora arabidopsis. [2] This species has become a model organism from its ability to infect the model plant Arabidopsis thaliana. [2] It is used to study plant-pathogen interactions, and is currently the only Hyaloperonospora species that has an assembled genome. [2]

Contents

History

In 2002, Hyaloperonospora was discovered and described by Constantinescu, O. and Fatehi,J. using morphological and molecular characteristics. [3] Later, Göker et al., also used molecular phylogenetic techniques showing that the group was different enough from the other Peronospora species to be its own taxon. [4] Hyaloperonospora along with Perofascia were the first downy mildews described using their molecular phylogenies. [1]

Habitat and ecology

Hyaloperonospora can be found on plants from about 20 different tribes of Brassicaceae. [1] They can generally be found anywhere their host plant grows, due to human transport from seed trade. [1] Hyaloperonospora parasitica is unlike most other species in the family in that it has a very wide host range, infecting a variety of crops[ citation needed ]. Another important interaction is with Hyaloperonospora brassicae, which also has a wider host range infecting many Brassica species[ citation needed ].

General form and structure

Hyaloperonospora differs from Perofascia in that its sporangiophores are tree-like, its haustoria are lobate to globose, and the walls of its oospores are relatively thinner. [1]

The life history does not differ from that of Peronospora, the genus that Hyaloperonospora species used to be classified under[ citation needed ]. It begins as sporangia, which are small spore-like structure, and when it lands next to a leaf stoma, it germinates a germ-tube. [5] The germ tube enters the leaf cell creating a haustorium, which allows the mould the uptake nutrients from the leaf. [5] The mould will continue to grow, with hyphae extending into the leaf's intercellular space. [5] This invasion kills some of the leaf cells and the leaf will develop a lesion followed by necrosis. [5] If the conditions are favourable, the mould will undergo asexual reproduction and produce a tree of sporangiophores out of the leaf. [5] The sporangiophores will produce conidia that can be dispersed by the wind to another plant. [5] If the conditions in the leaf were unfavourable, the mould can undergo sexual reproduction and produce haploid antheridia and haploid oogonia through meiosis. [5] These two structures are the only non-diploid stages of the Hyaloperonospora. [5] The antheridia will fuse to the oogonia inducing plasmogamy followed by karyogamy to form diploid oospores. [5] The oospores will then be dispersed through the wind to infect more plants. [5]

Practical importance

Hyaloperonospora arabidopsis infects the model plant Arabidopsis thaliana, and by association has become a model pathogen for studying plant-pathogen interactions. [2] Studying these interactions should give us insight into how we can more effectively protect our crops from deadly eukaryotic pathogens. It is also used as a model in the Arabidopsis eFP Browser as one of the nine biotic stresses. [6]

Genomics and genetics

The Hyaloperonospora arabidopsis genome was first sequenced and assembled in 2008 using Sanger and Illumina sequencing, by Baxter et al. [7] They reported a genome size of 78 Mb with 9.5x coverage of the nuclear genome and did not assemble the mitochondrial genome. [7] They also found that 42% of the genome consisted of repetitive elements. [7] 14,543 protein coding genes were predicted using a program to detect gene models. [7]

In 2015, two more isolates of Hyaloperonospora arabidopsis were sequenced using Illumina HiSeq with 90x coverage, and reported genome sizes of 70 Mb and 74 Mb[ citation needed ].

Species include

Related Research Articles

Downy mildew Name for several species of fungus

Downy mildew refers to any of several types of oomycete microbes that are obligate parasites of plants. Downy mildews exclusively belong to Peronosporaceae. In commercial agriculture, they are a particular problem for growers of crucifers, grapes and vegetables that grow on vines. The prime example is Peronospora farinosa featured in NCBI-Taxonomy and HYP3. This pathogen does not produce survival structures in the northern states of the United States, and overwinters as live mildew colonies in Gulf Coast states. It progresses northward with cucurbit production each spring. Yield loss associated with downy mildew is most likely related to soft rots that occur after plant canopies collapse and sunburn occurs on fruit. Cucurbit downy mildew only affects leaves of cucurbit plants.

White onion Onion cultivar

White onion or Allium cepa are a cultivar of dry onion which have a distinct light and mild flavour profile. Much like red onions, they have a high sugar and low sulphur content, and thus have a relatively short shelf life. White onions are used in a variety of dishes such as that of Mexican and European origin. Their uses in dishes often relate to their mild nature, they are often included in dishes to provide a light, fresh and sour taste to dishes and are often added uncooked to dishes such as salads.

Peronosporaceae Family of water moulds

Peronosporaceae are a family of water moulds that contains 21 genera, comprising more than 600 species. Most of them are called downy mildews.

<i>Hyaloperonospora brassicae</i> Species of single-celled organism

Hyaloperonospora brassicae, in the family Peronosporaceae, is a plant pathogen. It causes downy mildew of species of Brassica, Raphanus, Sinapis and probably other genera within the Brassicaceae. In the past, the cause of downy mildew in any plant in the family Brassicaceae was considered to be a single species Peronospora parasitica. However, this has recently been shown to be a complex of species with narrower host ranges, now classified in the genus Hyaloperonospora, for example Hyaloperonospora parasitica on the weed Capsella bursa-pastoris. From the perspective of plant pathology, Hyaloperonospora brassicae is now the name of the most important pathogen in this complex, attacking the major agricultural and horticultural Brassica species. Other significant Brassicaceous hosts are attacked by different species in the complex, e.g. horseradish by Hyaloperonospora cochleariae, wallflower by Hyaloperonospora cheiranthi.

<i>Hyaloperonospora parasitica</i> Species of plant pathogen

Hyaloperonospora parasitica is an oomycete from the family Peronosporaceae. It has been considered for a long time to cause downy mildew of a variety of species within the Brassicaceae, on which the disease can cause economically important damage by killing seedlings or affecting the quality of produce intended for freezing. Hyaloperonospora parasitica causes downy mildew on a wide range of many different plants. It belongs to the Kingdom Chromista, the phylum Oomycota, and the family Peronosporaceae. The former name for H. parasitica was Peronospora parasitica until it was reclassified and put in the genus Hyaloperonospora. It is an especially vicious disease on crops of the family Brassicaceae. It is most famous for being a model pathogen of Arabidopsis thaliana which is a model organism used for experimental purposes. Accordingly, the former Hyaloperonospora parasitica has been split into a large number of species. For instance, the taxonomically correct name of the parasite of the well-known model organism Arabidopsis thaliana is Hyaloperonospora arabidopsidis, not H. parasitica, whereas the pathogen of Brassica has to be called Hyaloperonospora brassicae.

<i>Peronospora sparsa</i> Species of single-celled organism

Peronospora sparsa is an oomycete plant pathogen that causes downy mildew in berry producing plants; especially in the genus's Rubus and Rosa. Downy mildew plant pathogens are often host specific and cause problems in cloudberries, blackberries, boysenberries, strawberries, and arctic bramble. Since they are host specific, Peronospora sparsa will not cause downy mildew in grapes because a different plant pathogen causes downy mildew in grapes; Plasmopara viticola. Although it depends on the cultivar, symptoms do not normally start until later stages of disease and can look different on different plants. The most common symptoms include red lesions in the veins of leaves, with dry and deformed berries.

Sclerophthora macrospora is a protist plant pathogen of the class Oomycota. It causes downy mildew on a vast number of cereal crops including oats, rice, maize, and wheat as well as varieties of turf grass. The common names of the diseases associated with Sclerophthora macrospora include “crazy top disease” on maize and yellow tuft disease on turf grass. The disease is present all over the world, but it is especially persistent in Europe.

<i>Bremia lactucae</i> Species of single-celled organism

Bremia lactucae is a plant pathogen. This microorganism causes a disease of lettuce denominated as downy mildew. Some other strains can be found on 36 genera of Asteraceae including Senecio and Sonchus. Experiments using sporangia from hosts do not infect lettuce and it is concluded that the fungus exists as a quantity of host-specific strains. Wild species, such as Lactuca serriola, or varieties of Lactuca can hold strains that infect lettuce, but these pathogens are not sufficiently common to seriously infect the plant.

Peronospora farinosa Species of single-celled organism

Peronospora farinosa is a species name that has been widely applied to downy mildew on leaves of wild and cultivated Amaranthaceae: Amaranthus, Atriplex, Bassia, Beta, Chenopodium, Halimione, Salsola, Spinacia, etc. However, the species name has been taxonomically rejected as the original description contained reference to multiple species and could not unequivocally be attributed to a species of Peronospora. In the past, some of the species on important crop plants have been given names as formae speciales, notably f.sp. betae on sugar beet and f.sp. spinaciae on spinach. However, phylogentic reconstructions have revealed that these "forms" of Peronospora on different genera and their subdivisions, are distinct species, most of which already have previously published scientific names. Such host specialization possibly also exists with respect to the various wild amaranthaceous species given as hosts of P. farinosa.

<i>Peronospora manshurica</i> Species of single-celled organism

Peronospora manshurica is a plant pathogen. It is a widespread disease on the leaves of soybeans and other crop plants. The fungi is commonly referred to as downy mildew, "leafspot", or "leaf-spot".

Plasmopara halstedii is a plant pathogen infecting sunflowers. The species is one of many pathogens commonly referred to as downy mildew. P. halstedii originated in North America.

Plasmopara obducens is a species of oomycete that causes Impatiens downy mildew. It was first described on Impatiens noli-tangere in Germany in 1877. Plasmopara obducens is known from native species of Impatiens since the 1800s, but outbreaks on cultivated varieties of Impatiens walleriana started in 2003 in the United Kingdom and in 2004 in the United States. The outbreak spread worldwide by 2016.

<i>Plasmopara viticola</i> Species of single-celled organism

Plasmopara viticola, the causal agent of grapevine downy mildew, is a heterothallic oomycete that overwinters as oospores in leaf litter and soil. In the spring, oospores germinate to produce macrosporangia, which under wet condition release zoospores. Zoospores are splashed by rain into the canopy, where they swim to and infect through stomata. After 7–10 days, yellow lesions appear on foliage. During favorable weather, the lesions sporulate and new secondary infections occur.

<i>Pseudoperonospora humuli</i> Species of single-celled organism

Pseudoperonospora humuli is a plant pathogen that causes downy mildew on hops.

Peronosclerospora sorghi is a plant pathogen. It is the causal agent of sorghum downy mildew. The pathogen is a fungal-like protist in the oomycota, or water mold, class. Peronosclerospora sorghi infects susceptible plants though sexual oospores, which survive in the soil, and asexual sporangia which are disseminated by wind. Symptoms of sorghum downy mildew include chlorosis, shredding of leaves, and death. Peronosclerospora sorghi infects maize and sorghum around the world, but causes the most severe yield reductions in Africa. The disease is controlled mainly through genetic resistance, chemical control, crop rotation, and strategic timing of planting.

<i>Pseudoperonospora cubensis</i> Species of single-celled organism

Pseudoperonospora cubensis is a species of water mould known for causing downy mildew on cucurbits such as cantaloupe, cucumber, pumpkin, squash and watermelon. This water mould is an important pathogen of all these crops, especially in areas with high humidity and rainfall, such as the eastern United States. In most years the disease is an annual, late-season problem on squash and pumpkin in the eastern and central United States, however, since 2004 it has become one of the most important diseases in cucumber production. Considered a highly destructive foliar disease of cucurbits, successful breeding in the mid-twentieth century provided adequate control of downy mildew in cucumber without the use of fungicides. The resurgence in virulence has caused growers great concern and substantial economic losses, while downy mildew in other cucurbit crops continues to be a yearly hindrance.

<i>Peronospora</i> Genus of plant pathogen

Peronospora is a genus of oomycetes that are obligate plant pathogens of many eudicots. Most species in this group produce a downy mildew disease, which can cause severe damage to many different cultivated crops, as well as wild and ornamental plants. There are 19 genera that produce downy mildew, and Peronospora has been placed alongside Pseudoperonospora in the group of downy mildews with coloured conidia. Peronospora has far more species than any other genus of the downy mildews. However, many species have been moved from this genus to be reclassified to other or new genera. Among these was the most famous Peronospora species, formerly known as Peronospora parasitica, and now known as Hyaloperonospora parasitica. Now, the Peronospora species of most importance is likely the Peronospora tabacina. Peronospora tabacina causes blue mold on tobacco plants and can severely reduce yields of this economically important crop to the point where it has been classified as a bioweapon.

<i>Hyaloperonospora arabidopsidis</i> Species of single-celled organism

Hyaloperonospora arabidopsidis is a species from the family Peronosporaceae. It is an obligate parasite and the causal agent of the downy mildew of the plant model organism Arabidopsis thaliana. While H. arabidopsidis has for a long time been subsumed under Peronospora parasitica, recent studies have shown that H. parasitica is restricted to Capsella bursa-pastoris as a host plant. Like the other Hyaloperonospora species, H. arabidopsidis is highly specialized to Arabidopsis thaliana.

<i>Peronospora destructor</i> Species of single-celled organism

Peronospora destructor is a plant pathogen. It causes downy mildew on leaves of cultivated and wild Allium. Allium cepa is most often affected, while Allium schoenoprasum (chives) and Allium porrum (leek) are only occasionally affected.

Peronospora arborescens is a plant pathogen. It causes downy mildew on leaves of Papaver spp. It has economic importance on Papaver somniferum grown as an oilseed crop, for example in central and eastern Europe. It is controlled by sanitation, crop rotation, use of clean seed and fungicide sprays of the foliage. There are other species of Peronospora which occur on Papaver: Peronospora argemones (Gäum.), Peronospora cristata (Tranzschel), and Peronospora papaveris-pilosi (Vienn.-Bourg.).

References

  1. 1 2 3 4 5 6 7 8 Thines, M., & Choi, Y. J. (2015). "Evolution, diversity, and taxonomy of the Peronosporaceae, with focus on the genus Peronospora". Phytopathology. 106 (1): 6–18. doi: 10.1094/PHYTO-05-15-0127-RVW . PMID   26649784.CS1 maint: multiple names: authors list (link)
  2. 1 2 3 4 Coates, M. E., & Beynon, J. L. (2010). "Hyaloperonospora arabidopsidis as a pathogen model". Annual Review of Phytopathology. 48: 329–45. doi:10.1146/annurev-phyto-080508-094422. PMID   19400636.CS1 maint: multiple names: authors list (link)
  3. Constantinescu, O. & Fatehi,J. (2002). "Peronospora-like fungi (Chromista, Peronosporales) parasitic on Brassicaceae and related hosts". Nova Hedwigia. 74 (3–4): 291–338. doi:10.1127/0029-5035/2002/0074-0291.CS1 maint: multiple names: authors list (link)
  4. Göker, M., Voglmayr, H., Riethmüller, A., Weiß, M., & Oberwinkler, F. (2003). "Taxonomic aspects of Peronosporaceae inferred from Bayesian molecular phylogenetics". Canadian Journal of Botany. 81 (7): 672–683. doi:10.1139/b03-066.CS1 maint: multiple names: authors list (link)
  5. 1 2 3 4 5 6 7 8 9 10 Krsteska, V., Dimeska, V., Stojkov, S., & Stojanoski, P. (2015). "Peronospora tabacina A. the causing agent of Blue Mold disease on tobacco". Bulgarian Journal of Agricultural Science. 21: 132–139.CS1 maint: multiple names: authors list (link)
  6. Winter, D., Vinegar, B., Nahal, H., Ammar, R., Wilson, G. V., & Provart, N. J. (2007). "An "Electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets". PLOS ONE. 2 (8): e718. Bibcode:2007PLoSO...2..718W. doi: 10.1371/journal.pone.0000718 . PMC   1934936 . PMID   17684564.CS1 maint: multiple names: authors list (link)
  7. 1 2 3 4 Baxter, L., Tripathy, S., Ishaque, N., Boot, N., Cabral, A., Kemen, E., ... & Bittner-Eddy, P. (2010). "Signatures of adaptation to obligate biotrophy in the Hyaloperonospora arabidopsidis genome". Science. 330 (6010): 1549–1551. Bibcode:2010Sci...330.1549B. doi:10.1126/science.1195203. PMC   3971456 . PMID   21148394.CS1 maint: multiple names: authors list (link)