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Pseudomonadota is a major phylum of Gram-negative bacteria. The renaming of several prokaryote phyla in 2021, including Pseudomonadota, remains controversial among microbiologists, many of whom continue to use the earlier name Proteobacteria, of long standing in the literature. The phylum Proteobacteria includes a wide variety of pathogenic genera, such as Escherichia, Salmonella, Vibrio, Yersinia, Legionella, and many others. Others are free-living (non-parasitic) and include many of the bacteria responsible for nitrogen fixation.
The Bacillota are a phylum of bacteria, most of which have gram-positive cell wall structure. The renaming of phyla such as Firmicutes in 2021 remains controversial among microbiologists, many of whom continue to use the earlier names of long standing in the literature.
Fusobacteriota are obligately anaerobic non-sporeforming Gram-negative bacilli. Since the first reports in the late nineteenth century, various names have been applied to these organisms, sometimes with the same name being applied to different species. More recently, not only have there been changes to the nomenclature, but also attempts to differentiate between species which are believed to be either pathogenic or commensal or both. Because of their asaccharolytic nature, and a general paucity of positive results in routine biochemical tests, laboratory identification of the Fusobacteriota has been difficult. However, the application of novel molecular biological techniques to taxonomy has established a number of new species, together with the subspeciation of Fusobacterium necrophorum and F. nucleatum, and provided new methods for identification. The involvement of Fusobacteriota in a wide spectrum of human infections causing tissue necrosis and septicaemia has long been recognised, and, more recently, their importance in intra-amniotic infections, premature labour and tropical ulcers has been reported.
The International Code of Nomenclature of Prokaryotes (ICNP) or Prokaryotic Code, formerly the International Code of Nomenclature of Bacteria (ICNB) or Bacteriological Code (BC), governs the scientific names for Bacteria and Archaea. It denotes the rules for naming taxa of bacteria, according to their relative rank. As such it is one of the nomenclature codes of biology.
Bacterial taxonomy is subfield of taxonomy devoted to the classification of bacteria specimens into taxonomic ranks.
Cystobacter is a genus in the phylum Myxococcota (Bacteria).
Acetomicrobium is a genus in the phylum Synergistota (Bacteria). In 2016, the former genus Anaerobaculum was folded into Acetomicrobium.
Acetothermus is a genus in the phylum Bacteroidota (Bacteria).
Achromatium is a genus in the phylum Pseudomonadota (Bacteria).
Actinocorallia is a genus in the phylum Actinomycetota (Bacteria).
Albibacter is a genus in the phylum Pseudomonadota (Bacteria).
Alishewanella is a genus in the phylum Pseudomonadota (bacteria).
Cryptosporangium is a genus of bacteria in the phylum Actinomycetota.
Cryptanaerobacter is a genus in the phylum Bacillota (Bacteria).
Stigmatella is a bacterium genus in the phylum Myxococcota.
Nikos Kyrpides is a Greek-American bioscientist who has worked on the origins of life, information processing, bioinformatics, microbiology, metagenomics and microbiome data science. He is a senior staff scientist at the Berkeley National Laboratory, head of the Prokaryote Super Program and leads the Microbiome Data Science program at the US Department of Energy Joint Genome Institute.
References
- names after institutions in LPSN ; Parte, Aidan C.; Sardà Carbasse, Joaquim; Meier-Kolthoff, Jan P.; Reimer, Lorenz C.; Göker, Markus (1 November 2020). "List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ". International Journal of Systematic and Evolutionary Microbiology. 70 (11): 5607–5612. doi: 10.1099/ijsem.0.004332 .
- ↑ Help! Latin! How to avoid the most common mistakes while giving Latin names to newly discovered prokaryotes. Microbiología (Sociedad Española de Microbiología), 1996, 12, 473-475. "H.G. Trüper: Help! Latin! How to avoid the most common mistakes while giving Latin names to newly discovered prokaryotes". Archived from the original on 2011-10-07. Retrieved 2011-04-14.