Olsenella

Olsenella
Scientific classification
Domain:	Bacteria
Kingdom:	Bacillati
Phylum:	Actinomycetota
Class:	Coriobacteriia
Order:	Coriobacteriales
Family:	Atopobiaceae
Genus:	Olsenella Dewhirst et al. 2001 [1]
Type species
Olsenella uli (Olsen et al. 1991) Dewhirst et al. 2001
Species [2]
O. absiana O. intestinalis O. kribbiana O. massiliensis O. phocaeensis O. porci O. profusa O. uli O. umbonata O. urininfantis

Olsenella is a Gram-positive, non-spore-forming, obligate anaerobic and non-motile bacterial genus from the family Atopobiaceae . ^{[1] [3] [4] [5]} Olsenella is named after the microbiologist Ingar Olsen. ^{[5] [6]} Olsenella bacteria are involved in endodontic infections in humans. ^[7]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN) ^[1] and National Center for Biotechnology Information (NCBI). ^[2]

16S rRNA based LTP_10_2024 [8] [9] [10]	120 marker proteins based GTDB 09-RS220 [11] [12] [13]
Olsenella O. profusa O. phocaeensis O. massiliensis O. uli O. porci O. urininfantis	Olsenella O. uli (Olsen et al. 1991) Dewhirst et al. 2001 O. porciWylensek et al. 2021 O. phocaeensisRicaboni et al. 2017 ex Zgheib et al. 2021 O. urininfantisZgheib et al. 2021 O. massiliensisZgheib et al. 2021 O. profusa Dewhirst et al. 2001

References

1. A.C. Parte; et al. "Olsenella". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2025-02-28.
2. C.L. Schoch; et al. "Olsenella". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2025-02-28.
3. "Olsenella". www.uniprot.org.
4. Parker, Charles Thomas; Taylor, Dorothea; Garrity, George M (2011). Parker, Charles Thomas; Garrity, George M (eds.). "Nomenclature Abstract for Olsenella Dewhirst et al. 2001 emend. Kraatz et al. 2011". The NamesforLife Abstracts. doi:10.1601/nm.5755.
5. Dewhirst, Floyd E.; Wade, William G. (2015). "Olsenella". Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Ltd. pp. 1–5. doi:10.1002/9781118960608.gbm00220. ISBN   9781118960608.
6. Whitman, William B.; Goodfellow, Michael; Kämpfer, Peter; Busse, Hans-Jürgen; Trujillo, Martha E.; Ludwig, Wolfgang; Suzuki, Ken-ichiro (2012). Bergey's Manual of Systematic Bacteriology: Volume 5: The Actinobacteria. Springer Science & Business Media. ISBN   9780387682334.
7. Torabinejad, Mahmoud; Walton, Richard E. (2009). Endodontics: Principles and Practice. Elsevier Health Sciences. ISBN   978-1416038511.
8. "The LTP" . Retrieved 10 December 2024.
9. "LTP_all tree in newick format" . Retrieved 10 December 2024.
10. "LTP_10_2024 Release Notes" (PDF). Retrieved 10 December 2024.
11. "GTDB release 09-RS220". Genome Taxonomy Database . Retrieved 10 May 2024.
12. "bac120_r220.sp_labels". Genome Taxonomy Database . Retrieved 10 May 2024.
13. "Taxon History". Genome Taxonomy Database . Retrieved 10 May 2024.

Further reading

• Göker, Markus; Held, Brittany; Lucas, Susan; Nolan, Matt; Yasawong, Montri; Glavina Del Rio, Tijana; Tice, Hope; Cheng, Jan-Fang; Bruce, David; Detter, John C.; Tapia, Roxanne; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun-Juan; Jeffries, Cynthia D.; Rohde, Manfred; Sikorski, Johannes; Pukall, Rüdiger; Woyke, Tanja; Bristow, James; Eisen, Jonathan A.; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans-Peter; Lapidus, Alla (20 August 2010). "Complete genome sequence of Olsenella uli type strain (VPI D76D-27CT)". Standards in Genomic Sciences. 3 (1): 76–84. doi:10.4056/sigs.1082860. PMC   3035265 . PMID   21304694.
• Kraatz, M; Wallace, RJ; Svensson, L (April 2011). "Olsenella umbonata sp. nov., a microaerotolerant anaerobic lactic acid bacterium from the sheep rumen and pig jejunum, and emended descriptions of Olsenella, Olsenella uli and Olsenella profusa". International Journal of Systematic and Evolutionary Microbiology. 61 (Pt 4): 795–803. doi: 10.1099/ijs.0.022954-0 . PMID   20435744.