Palaeococcus ferrophilus

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Palaeococcus ferrophilus
Scientific classification
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P. ferrophilus
Binomial name
Palaeococcus ferrophilus
Takai et al. 2000

Palaeococcus ferrophilus is a barophilic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney. It cells are irregular cocci and motile with multiple polar flagella. [1]

Contents

Paleococcus was the third genus within Euryarchaeota to be described in the literature. These organisms prefer to use elemental sulfur as an electron acceptor, but they can also use ferrous oxide. [2]

Related Research Articles

<span class="mw-page-title-main">Archaeoglobaceae</span> Family of archaea

Archaeoglobaceae are a family of the Archaeoglobales. All known genera within the Archaeoglobaceae are hyperthermophilic and can be found near undersea hydrothermal vents. Archaeoglobaceae are the only family in the order Archaeoglobales, which is the only order in the class Archaeoglobi.

Ferroglobus is a genus of the Archaeoglobaceae.

<i>Pyrococcus furiosus</i> Species of archaeon

Pyrococcus furiosus is a heterotrophic, strictly anaerobic, extremophilic, model species of archaea. It is classified as a hyperthermophile because it thrives best under extremely high temperatures, and is notable for having an optimum growth temperature of 100 °C. P. furiosus belongs to the Pyrococcus genus, most commonly found in extreme environmental conditions of hydrothermal vents. It is one of the few prokaryotic organisms that has enzymes containing tungsten, an element rarely found in biological molecules.

Geoglobus is a hyperthermophilic member of the Archaeoglobaceae within the Euryarchaeota. It consists of two species, the first, G. ahangari, isolated from the Guaymas Basin hydrothermal system located deep within the Gulf of California. As a hyperthermophile, it grows best at a temperature of 88 °C and cannot grow at temperatures below 65 °C or above 90 °C. It possess an S-layer cell wall and a single flagellum. G. ahangari is an anaerobe, using poorly soluble ferric iron (Fe3+) as a terminal electron acceptor. It can grow either autotrophically using hydrogen gas (H2) or heterotrophically using a large number of organic compounds, including several types of fatty acids, as energy sources. G. ahangari was the first archaeon isolated capable of using hydrogen gas coupled to iron reduction as an energy source and the first anaerobe isolated capable of using long-chain fatty acids as an energy source.

<span class="mw-page-title-main">Campylobacterota</span> Class of bacteria

Campylobacterota are a phylum of bacteria. All species of this phylum are Gram-negative.

<i>Ignicoccus</i> Genus of archaea

Ignicoccus is a genus of hyperthermophillic Archaea living in marine hydrothermal vents. They were discovered in samples taken at the Kolbeinsey Ridge north of Iceland, as well as at the East Pacific Rise in 2000.

Methanococcus is a genus of coccoid methanogens of the family Methanococcaceae. They are all mesophiles, except the thermophilic M. thermolithotrophicus and the hyperthermophilic M. jannaschii. The latter was discovered at the base of a “white smoker” chimney at 21°N on the East Pacific Rise and it was the first archaeal genome to be completely sequenced, revealing many novel and eukaryote-like elements.

In taxonomy, Palaeococcus is a genus of the Thermococcaceae.

In taxonomy, Thermococcus is a genus of thermophilic Archaea in the family the Thermococcaceae.

In taxonomy, Aeropyrum is a genus of the Desulfurococcaceae.

Thermococcus litoralis is a species of Archaea that is found around deep-sea hydrothermal vents as well as shallow submarine thermal springs and oil wells. It is an anaerobic organotroph hyperthermophile that is between 0.5–3.0 μm (20–118 μin) in diameter. Like the other species in the order thermococcales, T. litoralis is an irregular hyperthermophile coccus that grows between 55–100 °C (131–212 °F). Unlike many other thermococci, T. litoralis is non-motile. Its cell wall consists only of a single S-layer that does not form hexagonal lattices. Additionally, while many thermococcales obligately use sulfur as an electron acceptor in metabolism, T. litoralis only needs sulfur to help stimulate growth, and can live without it. T. litoralis has recently been popularized by the scientific community for its ability to produce an alternative DNA polymerase to the commonly used Taq polymerase. The T. litoralis polymerase, dubbed the vent polymerase, has been shown to have a lower error rate than Taq but due to its proofreading 3’–5’ exonuclease abilities.

<i>Thermococcus gammatolerans</i> Species of archaeon

Thermococcus gammatolerans is an archaea extremophile and the most radiation-resistant organism known to exist.

Methanocaldococcus jannaschii is a thermophilic methanogenic archaean in the class Methanococci. It was the first archaeon, and third organism, to have its complete genome sequenced. The sequencing identified many genes unique to the archaea. Many of the synthesis pathways for methanogenic cofactors were worked out biochemically in this organism, as were several other archaeal-specific metabolic pathways.

Pyrococcus horikoshii is a hyperthermophilic, anaerobic archaeon, first isolated from hydrothermal fluid samples obtained at the Okinawa Trough vents at a depth of 1,395 metres (4,577 ft). It is obligately heterotrophic, cells are irregular cocci with a tuft of flagella, growing optimally at 98 °C, sulphur greatly enhancing its growth.

Pyrococcus abyssi is a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent in the North Fiji Basin at 2,000 metres (6,600 ft). It is anaerobic, sulfur-metabolizing, gram-negative, coccus-shaped and highly motile. Its optimum growth temperature is 96 °C (205 °F). Its type strain is GE5. Pyrococcus abyssi has been used as a model organism in studies of DNA polymerase. This species can also grow at high cell densities in bioreactors.

Thermococcus profundus is a hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent. It is coccoid-shaped with 1–2 μm in diameter, designated as strain DT5432.

Thermococcus chitonophagus is a chitin-degrading, hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent. It is anaerobic, round to slightly irregular coccus-shaped, 1.2–2.5 μm in diameter, and motile by means of a tuft of flagella.

Thermococcus barophilus is a piezophilic and hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent. It is anaerobic and sulfur-metabolising, with type strain MPT.

Thermococcus peptonophilus is a fast-growing hyperthermophilic archaeon. It is coccus-shaped, obligately anaerobic and about 0.7–2 μm in diameter. It is a strict anaerobe and grows exclusively on complex substrates, such as peptone, casein, tryptone, and yeast extract. It cannot use carbon dioxide as a source of carbon. Although it can grow somewhat in the absence of elemental sulfur, it prefers sulfur.

Thermococcus hydrothermalis is a hyperthermophilic archaeon. It is strictly anaerobic and coccus-shaped, and its cells range from 0.8 to 2.0 μm in diameter, with type strain AL662T. It was isolated from a hydrothermal vent in the East Pacific Rise. This species is notable for its α-glucosidase, which functions optimally at a temperature of 110 °C.

References

  1. Takai, K.; Sugai, A.; Itoh, T.; Horikoshi, K. (2000). "Palaeococcus ferrophilus gen. nov., sp. nov., a barophilic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney". International Journal of Systematic and Evolutionary Microbiology. 50 (2): 489–500. doi: 10.1099/00207713-50-2-489 . ISSN   1466-5026. PMID   10758851.
  2. Tetsuya Tokano, ed. (2004-09-14). Water on Mars and Life. Springer Science and Business Media. p. 308. ISBN   3540206248 . Retrieved 2016-09-13.

Further reading