Root mucilage

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Root mucilage is made of plant-specific polysaccharides or long chains of sugar molecules. [1] [2] This polysaccharide secretion of root exudate forms a gelatinous substance that sticks to the caps of roots. [3] Root mucilage is known to play a role in forming relationships with soil-dwelling life forms. [1] [4] Just how this root mucilage is secreted is debated, but there is growing evidence that mucilage derives from ruptured cells. As roots penetrate through the soil, many of the cells surrounding the caps of roots are continually shed and replaced. [5] These ruptured or lysed cells release their component parts, which include the polysaccharides that form root mucilage. These polysaccharides come from the Golgi apparatus and plant cell wall, which are rich in plant-specific polysaccharides. [6] Unlike animal cells, plant cells have a cell wall that acts as a barrier surrounding the cell providing strength, which supports plants just like a skeleton.

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This cell wall is used to produce everyday products such as timber, paper, and natural fabrics, including cotton. [7]

Root mucilage is a part of a wider secrete from plant roots known as root exudate. Plant roots secrete a variety of organic molecules into the surrounding soil, such as proteins, enzymes, DNA, sugars and amino acids, which are the building blocks of life. [3] [4] This collective secretion is known as root exudate. This root exudate prevents root infection from bacteria and fungi, helps the roots to penetrate through the soil, and can create a micro-climate that is beneficial to the plant.

Root mucilage composition

To determine the sugars within root mucilage, monosaccharide analysis and monosaccharide linkage analysis are undertaken. Monosaccharide linkage analysis involves methylating the root mucilage, which contains polysaccharides. The root mucilage is hydrolysed using acid to break down the polysaccharides into their monosaccharide components. [8] The subsistent monosaccharides are then reduced to open their rings. The open ring monosaccharides are then acetylated, and separated typically by using gas chromatography, although liquid chromatography is also used. The masses of the monosaccharides are then detected using mass spectrometry. [9] The gas chromatography retention times and the mass spectrometry chromatogram are used to identify how the monosaccharides are linked to form the polysaccharides that make root mucilage. For monosaccharide analysis, which reveals the sugars that make root mucilage, scientists hydrolyse the root mucilage using acid, and put the samples directly through gas chromatography linked to mass spectrometry. [8] [9]

Several scientists have determined the composition of plant root mucilage using monosaccharide analysis and linkage analysis, showing that Maize (Zea mays) root mucilage contains high levels of galactose, xylose, arabinose, rhamnose, and glucose, and lower levels of uronic acid, mannose, fucose, and glucuronic acid. [10] Wheat (Triticum aestivum) root mucilage also contains high levels of xylose, arabinose, galactose, glucose, and lower levels of rhamnose, glucuronic acid and mannose. [11] Cowpea (Vigna unguiculata) also contains high levels of arabinose, galactose, glucose, fucose, and xylose, and lower levels of rhamnose, mannose, and glucuronic acid. [11] Many other plants have had their root mucilage composition determined using monosaccharide analysis and monosaccharide linkage analysis. With the following monosaccharides determined as well as their linkages, scientists have determined the presence of pectin, arabinogalactan proteins, xyloglucan, arabinan, and xylan, which are plant-specific polysaccharides within the root mucilage of plants.

Importance and role of root mucilage

Plants use up to 40% of their energy secreting root mucilage, which they generate from photosynthesis that takes place in the leaves. [4] Root mucilage plays a role in developing a symbiotic relationship with the soil-dwelling fungi. This important relationship is known to affect 94% of land plants, [11] and benefits plants by increasing water and nutrient uptake from the soil, particularly phosphorus. In return, the fungi receive food in the form of carbohydrates from the plant in the form of broken-down root mucilage. Without this relationship, many plants would struggle to gain sufficient water or nutrients. [12]

Root mucilage also helps soil to stick to roots. [13] The purpose of this is to maintain the plant's contact with the soil so that the plant can regulate the levels of water it can absorb, decrease friction so that roots can penetrate through the soil, and maintain a micro-climate. [14] Root mucilage contributes to the particular hydrophysical properties of the rhizosphere, which can affect the plant's response to water deficit. [15] For example, root mucilage can reduce evaporation and store water in the rhizosphere. [16]

See also

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<span class="mw-page-title-main">Polysaccharide</span> Long carbohydrate polymers comprising starch, glycogen, cellulose, and chitin

Polysaccharides, or polycarbohydrates, are the most abundant carbohydrates found in food. They are long chain polymeric carbohydrates composed of monosaccharide units bound together by glycosidic linkages. This carbohydrate can react with water (hydrolysis) using amylase enzymes as catalyst, which produces constituent sugars. They range in structure from linear to highly branched. Examples include storage polysaccharides such as starch, glycogen and galactogen and structural polysaccharides such as cellulose and chitin.

<span class="mw-page-title-main">Glycoprotein</span> Protein with oligosaccharide modifications

Glycoproteins are proteins which contain oligosaccharide chains covalently attached to amino acid side-chains. The carbohydrate is attached to the protein in a cotranslational or posttranslational modification. This process is known as glycosylation. Secreted extracellular proteins are often glycosylated.

<span class="mw-page-title-main">Exudate</span> Fluid emitted through pores or a wound

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<span class="mw-page-title-main">Rhizosphere</span> Region of soil or substrate comprising the root microbiome

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<span class="mw-page-title-main">Xylan</span> A plant cell wall polysaccharide

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<span class="mw-page-title-main">Rhamnogalacturonan-II</span>

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Glossostemon bruguieri or Dombeya arabica is a species of flowering plant in the family Malvaceae. It is a shrub with thick long tapering dark colored roots with 70–100 cm in length and 5–8 cm in breadth, found in Yemen, Iran, Iraq, Egypt, Saudi Arabia, Turkey and Morocco. The dried peeled roots of G. bruguieri are called in Egypt and Arab countries. The roots are commonly used in traditional medicine for many nutritional and medicinal values.

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References

  1. 1 2 Walker, Travis S.; Bais, Harsh Pal; Grotewold, Erich; Vivanco, Jorge M. (2003-05-01). "Root Exudation and Rhizosphere Biology". Plant Physiology . 132 (1): 44–51. doi:10.1104/pp.102.019661. ISSN   1532-2548. PMC   1540314 . PMID   12746510.
  2. Baetz, Ulrike; Martinoia, Enrico (2014-02-01). "Root exudates: the hidden part of plant defense" (PDF). Trends in Plant Science . 19 (2): 90–98. doi:10.1016/j.tplants.2013.11.006. PMID   24332225.
  3. 1 2 Jackson, Mike (2003-06-01). "Ridge, I. (ed) Plants". Annals of Botany . 91 (7): 940–941. doi:10.1093/aob/mcg100. ISSN   0305-7364. PMC   4242402 .
  4. 1 2 3 "The Rhizosphere - Roots, Soil and Everything In Between | Learn Science at Scitable". Nature.com. Retrieved 2015-09-01.
  5. McCully, Margaret E. (1999-01-01). "ROOTS IN SOIL: Unearthing the Complexities of Roots and Their Rhizospheres". Annual Review of Plant Physiology and Plant Molecular Biology . 50 (1): 695–718. doi:10.1146/annurev.arplant.50.1.695. PMID   15012224.
  6. Read, D. B.; Gregory, P. J. (1997-12-01). "Surface tension and viscosity of axenic maize and lupin root mucilages". New Phytologist . 137 (4): 623–628. doi: 10.1046/j.1469-8137.1997.00859.x . ISSN   1469-8137.
  7. Albersheim, Peter; Darvill, Alan; Roberts, Keith; Sederoff, Ron; Staehelin, Andrew (2010-04-23). Plant Cell Walls. Garland Science. ISBN   9781136843587.
  8. 1 2 Pettolino, Filomena A.; Walsh, Cherie; Fincher, Geoffrey B.; Bacic, Antony (2012-09-01). "Determining the polysaccharide composition of plant cell walls". Nature Protocols . 7 (9): 1590–1607. doi:10.1038/nprot.2012.081. ISSN   1754-2189. PMID   22864200. S2CID   13305591.
  9. 1 2 Lindberg, Bengt (1972-01-01). "[12] Methylation analysis of polysaccharides". In Enzymology, BT - Methods in (ed.). Complex Carbohydrates Part B. Complex Carbohydrates Part B. Vol. 28. Academic Press. pp. 178–195. doi:10.1016/0076-6879(72)28014-4. ISBN   9780121818913.
  10. Bacic, Antony; Moody, Susan F.; Clarke, Adrienne E. (1986-03-01). "Structural Analysis of Secreted Root Slime from Maize (Zea mays L.)". Plant Physiology. 80 (3): 771–777. doi:10.1104/pp.80.3.771. ISSN   1532-2548. PMC   1075198 . PMID   16664700.
  11. 1 2 3 Moody, Susan F.; Clarke, Adrienne E.; Bacic, Antony (1988-01-01). "Structural analysis of secreted slime from wheat and cowpea roots". Phytochemistry . 27 (9): 2857–2861. doi:10.1016/0031-9422(88)80676-9.
  12. Gianinazzi-Pearson, V (1996-10-01). "Plant Cell Responses to Arbuscular Mycorrhizal Fungi: Getting to the Roots of the Symbiosis". The Plant Cell . 8 (10): 1871–1883. doi:10.1105/tpc.8.10.1871. ISSN   1040-4651. JSTOR   3870236. PMC   161321 . PMID   12239368.
  13. Jones, D. L.; Nguyen, C.; Finlay, R. D. (2009-02-25). "Carbon flow in the rhizosphere: carbon trading at the soil–root interface". Plant and Soil . 321 (1–2): 5–33. doi:10.1007/s11104-009-9925-0. ISSN   0032-079X. S2CID   21949997.
  14. Morel, Jean Louis; Habib, Leila; Plantureux, Sylvain; Guckert, Armand (1991-09-01). "Influence of maize root mucilage on soil aggregate stability". Plant and Soil. 136 (1): 111–119. doi:10.1007/BF02465226. ISSN   0032-079X. S2CID   20105678.
  15. Le Gall, Samuel; Bérard, Annette; Page, David; Lanoe, Lucas; Bertin, Nadia; Doussan, Claude (2021). "Increased exopolysaccharide production and microbial activity affect soil water retention and field performance of tomato under water deficit". Rhizosphere. 19: 100408. doi:10.1016/j.rhisph.2021.100408. ISSN   2452-2198.
  16. Williams, KA; Ruiz, Siul Aljadi; Petroselli, Chiara; Walker, N; Fletcher, DM McKay; Pileio, Giuseppe; Roose, Tiina (2021). "Physical characterisation of chia mucilage polymeric gel and its implications on rhizosphere science-Integrating imaging, MRI, and modelling to gain insights into plant and microbial amended soils". Soil Biology and Biochemistry. 162 (162): 108404. doi:10.1016/j.soilbio.2021.108404. S2CID   239687872.