Sodalis (bacterium)

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Sodalis
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Sodalis

Dale and Maudlin 1999
Species

Sodalis is a genus of bacteria within the family Pectobacteriaceae. This genus contains several insect endosymbionts and also a free-living group. It is studied due to its potential use in the biological control of the tsetse fly. Sodalis is an important model for evolutionary biologists because of its nascent endosymbiosis with insects.

Contents

Occurrence and ecological significance

Sodalis was described in louse fly ( Craterina melbae ), [2] in stinkbug (Cantao ocellatus) [3] in Louse (Columbicola columbae) [4] and in other ectoparasites of water mammals (like Proechinophthirus fluctus, Louse). [5]

Species Candidatus Sodalis melophagi was described in sheep ked ( Melophagus ovinus ). [6]

Another species Candidatus Sodalis pierantonius str. SOPE is known as endosymbiont of rice weevil ( Sitophilus oryzae ) and can supply rice weevil with essential vitamins like pantothenic acid, riboflavin, and biotin. [7]

A species of bacteria within this genera, Sodalis glossinidius , was found in the hemolymph of the tsetse fly (Glossina morsitans). [8] This bacteria has been used in paratransgenesis approaches to fight sleeping sickness. [9] Genome analysis shows that symbiosis between Sodalis glossinidius and tsetse fly is evolutionary young. Sodalis has large genome and pseudogenes which remain, however, active in cell-free culture. [10] Fly cleared from its native symbionts can be successfully repopulated by Sodalis from other fly species. [11] This might be used in potential biological control of tsetse fly.

Free-living species

The Sodalis bacterium has also been identified as free-living with no association to insects.

Sodalis praecaptivus, was isolated from a hand injured by a tree branch. [12]

Sodalis ligni was found to be widely associated with decomposing wood of various tree species. [13] S. ligni, unlike other Sodalis species, contains nitrogen fixation genes. Such ecological trait might be important for other saprotrophs living in deadwood as this habitat is nitrogen-limited. [14]

Compared to endosymbionts, free-living Sodalis species are characterized by larger genomes, longer genes, and fewer pseudogenes. These characteristics point to asymbiotic lifestyle of these species. Due to known free-living species and related endosymbionts with evolutionarily young link to insect, the whole genus is important for studies about development of the insect endosymbiosis.

References

  1. Oakeson, KF; Gil, R; Clayton, AL; Dunn, DM; von Niederhausern, AC; Hamil, C; Aoyagi, A; Duval, B; Baca, A; Silva, FJ; Vallier, A; Jackson, DG; Latorre, A; Weiss, RB; Heddi, A; Moya, A; Dale, C (Jan 2014). "Genome degeneration and adaptation in a nascent stage of symbiosis". Genome Biology and Evolution. 6 (1): 76–93. doi:10.1093/gbe/evt210. PMC   3914690 . PMID   24407854.
  2. Novakova, Eva; Hypsa, Vaclav (April 2007). "A new Sodalis lineage from bloodsucking fly Craterina melbae (Diptera, Hippoboscoidea) originated independently of the tsetse flies symbiont Sodalis glossinidius". FEMS Microbiology Letters. 269 (1): 131–135. doi: 10.1111/j.1574-6968.2006.00620.x . PMID   17227456.
  3. Kaiwa, Nahomi; Hosokawa, Takahiro; Kikuchi, Yoshitomo; Nikoh, Naruo; Meng, Xian Ying; Kimura, Nobutada; Ito, Motomi; Fukatsu, Takema (2010-06-01). "Primary Gut Symbiont and Secondary, Sodalis-Allied Symbiont of the Scutellerid Stinkbug Cantao ocellatus". Applied and Environmental Microbiology. 76 (11): 3486–3494. Bibcode:2010ApEnM..76.3486K. doi:10.1128/AEM.00421-10. ISSN   0099-2240. PMC   2876435 . PMID   20400564.
  4. Fukatsu, Takema; Koga, Ryuichi; Smith, Wendy A.; Tanaka, Kohjiiro; Nikoh, Naruo; Sasaki-Fukatsu, Kayoko; Yoshizawa, Kazunori; Dale, Colin; Clayton, Dale H. (2007-10-15). "Bacterial Endosymbiont of the Slender Pigeon Louse, Columbicola columbae, Allied to Endosymbionts of Grain Weevils and Tsetse Flies". Applied and Environmental Microbiology. 73 (20): 6660–6668. Bibcode:2007ApEnM..73.6660F. doi:10.1128/AEM.01131-07. ISSN   0099-2240. PMC   2075037 . PMID   17766458.
  5. Boyd, Bret M.; Allen, Julie M.; Koga, Ryuichi; Fukatsu, Takema; Sweet, Andrew D.; Johnson, Kevin P.; Reed, David L. (2016-06-01). "Two Bacterial Genera, Sodalis and Rickettsia, Associated with the Seal Louse Proechinophthirus fluctus (Phthiraptera: Anoplura)". Applied and Environmental Microbiology. 82 (11): 3185–3197. Bibcode:2016ApEnM..82.3185B. doi:10.1128/AEM.00282-16. ISSN   0099-2240. PMC   4959230 . PMID   26994086.
  6. Chrudimský, Tomáš; Husník, Filip; Nováková, Eva; Hypša, Václav (2012-07-17). "Candidatus Sodalis melophagi sp. nov.: Phylogenetically Independent Comparative Model to the Tsetse Fly Symbiont Sodalis glossinidius". PLOS ONE. 7 (7): e40354. Bibcode:2012PLoSO...740354C. doi: 10.1371/journal.pone.0040354 . ISSN   1932-6203. PMC   3398932 . PMID   22815743.
  7. Heddi, A.; Grenier, A.-M.; Khatchadourian, C.; Charles, H.; Nardon, P. (1999-06-08). "Four intracellular genomes direct weevil biology: Nuclear, mitochondrial, principal endosymbiont, and Wolbachia". Proceedings of the National Academy of Sciences. 96 (12): 6814–6819. Bibcode:1999PNAS...96.6814H. doi: 10.1073/pnas.96.12.6814 . ISSN   0027-8424. PMC   21998 . PMID   10359795.
  8. Dale, C.; Maudlin, I. (1 January 1999). "Sodalis gen. nov. and Sodalis glossinidius sp. nov., a microaerophilic secondary endosymbiont of the tsetse fly Glossina morsitans morsitans". International Journal of Systematic Bacteriology. 49 (1): 267–275. doi: 10.1099/00207713-49-1-267 . PMID   10028272.
  9. De Vooght, Linda; Caljon, Guy; De Ridder, Karin; Van Den Abbeele, Jan (2014-11-07). "Delivery of a functional anti-trypanosome Nanobody in different tsetse fly tissues via a bacterial symbiont, Sodalis glossinidius". Microbial Cell Factories. 13: 156. doi: 10.1186/s12934-014-0156-6 . ISSN   1475-2859. PMC   4230353 . PMID   25376234.
  10. Goodhead, Ian; Blow, Frances; Brownridge, Philip; Hughes, Margaret; Kenny, John; Krishna, Ritesh; McLean, Lynn; Pongchaikul, Pisut; Beynon, Rob; Darby, Alistair C. (2020). "Large-scale and significant expression from pseudogenes in Sodalis glossinidius – a facultative bacterial endosymbiont". Microbial Genomics. 6 (1): e000285. doi: 10.1099/mgen.0.000285 . PMC   7067036 . PMID   31922467.
  11. Weiss, Brian L.; Mouchotte, Rosa; Rio, Rita V. M.; Wu, Yi-neng; Wu, Zheyang; Heddi, Abdelaziz; Aksoy, Serap (2006-11-01). "Interspecific Transfer of Bacterial Endosymbionts between Tsetse Fly Species: Infection Establishment and Effect on Host Fitness". Applied and Environmental Microbiology. 72 (11): 7013–7021. Bibcode:2006ApEnM..72.7013W. doi:10.1128/AEM.01507-06. ISSN   0099-2240. PMC   1636136 . PMID   16950907.
  12. Chari, Abhishek; Oakeson, Kelly F.; Enomoto, Shinichiro; Jackson, D. Grant; Fisher, Mark A.; Dale, Colin (2015-05-01). "Phenotypic characterization of Sodalis praecaptivus sp. nov., a close non-insect-associated member of the Sodalis-allied lineage of insect endosymbionts". International Journal of Systematic and Evolutionary Microbiology. 65 (Pt_5): 1400–1405. doi:10.1099/ijs.0.000091. ISSN   1466-5026. PMC   4635462 . PMID   25782768.
  13. Tláskal, Vojtěch; Pylro, Victor Satler; Žifčáková, Lucia; Baldrian, Petr (2021-06-11). "Ecological Divergence Within the Enterobacterial Genus Sodalis: From Insect Symbionts to Inhabitants of Decomposing Deadwood". Frontiers in Microbiology. 12: 668644. doi: 10.3389/fmicb.2021.668644 . ISSN   1664-302X. PMC   8226273 . PMID   34177846. S2CID   235397197.
  14. Tláskal, Vojtěch; Brabcová, Vendula; Větrovský, Tomáš; Jomura, Mayuko; López-Mondéjar, Rubén; Oliveira Monteiro, Lummy Maria; Saraiva, João Pedro; Human, Zander Rainier; Cajthaml, Tomáš; Nunes da Rocha, Ulisses; Baldrian, Petr (2021-02-23). Faust, Karoline (ed.). "Complementary Roles of Wood-Inhabiting Fungi and Bacteria Facilitate Deadwood Decomposition". mSystems. 6 (1). Yahya Kooch, Maraike Probst. doi:10.1128/mSystems.01078-20. ISSN   2379-5077. PMC   7901482 . PMID   33436515.