Thiomonas delicata | |
---|---|
Scientific classification | |
Domain: | |
Phylum: | |
Class: | |
Order: | |
Family: | |
Genus: | |
Species: | T. delicata |
Binomial name | |
Thiomonas delicata Kelly and Wood 2006 [1] | |
Type strain | |
BCRC 17549, CCRC 17549, DSM 17897, IAM 12624, IFO 14566, KCTC 2851, LMG 7200, LMG 8696, NBRC 14566, strain THI 091, THI 091, THIO 91, TuT-1 [2] | |
Synonyms | |
Thiobacillus delicatus [3] |
Thiomonas delicata is an As(III)-oxidizing, nonmotile bacterium from the genus Thiomonas . [4] [5] Colonies of T. delicata are whitish-yellow in color. [5]
Wilson's snipe is a small, stocky shorebird. The genus name gallinago is New Latin for a woodcock or snipe from Latin gallina, "hen" and the suffix -ago, "resembling". The specific delicata is Latin for "dainty".
The Thermomicrobia is a group of thermophilic green non-sulfur bacteria. Based on species Thermomicrobium roseum and Sphaerobacter thermophilus, this bacteria class has the following description:
Methanotrophs are prokaryotes that metabolize methane as their source of carbon and chemical energy. They are bacteria or archaea, can grow aerobically or anaerobically, and require single-carbon compounds to survive.
Thiobacillus is a genus of Gram-negative Betaproteobacteria. Thiobacillus thioparus is the type species of the genus, and the type strain thereof is the StarkeyT strain, isolated by Robert Starkey in the 1930s from a field at Rutgers University in the United States of America. While over 30 "species" have been named in this genus since it was defined by Martinus Beijerinck in 1904,, most names were never validly or effectively published. The remainder were either reclassified into Paracoccus, Starkeya ; Sulfuriferula, Annwoodia, Thiomonas ; Halothiobacillus, Guyparkeria, or Thermithiobacillus or Acidithiobacillus. The very loosely defined "species" Thiobacillus trautweinii was where sulfur oxidising heterotrophs and chemolithoheterotrophs were assigned in the 1910-1960s era, most of which were probably Pseudomonas species. Many species named in this genus were never deposited in service collections and have been lost.
Nitrosomonas is a genus of Gram-negative bacteria, belonging to the Betaproteobacteria. It is one of the five genera of ammonia-oxidizing bacteria and, as an obligate chemolithoautotroph, uses ammonia as an energy source and carbon dioxide as a carbon source in presence of oxygen. Nitrosomonas are important in the global biogeochemical nitrogen cycle, since they increase the bioavailability of nitrogen to plants and in the denitrification, which is important for the release of nitrous oxide, a powerful greenhouse gas. This microbe is photophobic, and usually generate a biofilm matrix, or form clumps with other microbes, to avoid light. Nitrosomonas can be divided into six lineages: the first one includes the species Nitrosomonas europea, Nitrosomonas eutropha, Nitrosomonas halophila, and Nitrosomonas mobilis. The second lineage presents the species Nitrosomonas communis, N. sp. I and N. sp. II, meanwhile the third lineage includes only Nitrosomonas nitrosa. The fourth lineage includes the species Nitrosomonas ureae and Nitrosomonas oligotropha and the fifth and sixth lineages include the species Nitrosomonas marina, N. sp. III, Nitrosomonas estuarii and Nitrosomonas cryotolerans.
Gammaproteobacteria is a class of bacteria in the phylum Pseudomonadota. It contains about 250 genera, which makes it the most genera-rich taxon of the Prokaryotes. Several medically, ecologically, and scientifically important groups of bacteria belong to this class. It is composed by all Gram-negative microbes and is the most phylogenetically and physiologically diverse class of Proteobacteria.
The Nitrobacteraceae are a family of gram-negative, aerobic bacteria. They include plant-associated bacteria such as Bradyrhizobium, a genus of rhizobia associated with some legumes. It also contains animal-associated bacteria such as Afipia felis, formerly thought to cause cat-scratch disease. Others are free-living, such as Rhodopseudomonas, a purple bacterium found in marine water and soils. The strain Rhodopseudomonas palustris DX-1 can generate an electric current with no hydrogen production, a trait being explored in the development of the microbial fuel cell. The genus Afipia has also been found in the atmosphere, where it uses methylsulfonylmethane as a carbon source.
Nitrospirota is a phylum of bacteria. It includes multiple genera, such as Nitrospira, the largest. The first member of this phylum, Nitrospira marina, was discovered in 1985. The second member, Nitrospira moscoviensis, was discovered in 1995.
Armatimonadota is a phylum of gram-negative bacteria.
Polaromonas hydrogenivorans is a Gram-negative, nonmotile, non-spore-forming, psychrotolerant bacterium from the genus Polaromonas, which was isolated from Alaskan forest soil. P. hydrogenivorans has the ability to oxidize hydrogen and its colonies are white.
Thiomonas is a genus of Gram-negative, non-spore-forming bacteria from the family of Comamonadaceae.
Thiomonas arsenitoxydans is a Gram-negative, moderately acidophilic, non-spore-forming, rod-shaped, motile bacterium from the genus Thiomonas, which has the ability to use arsenite as an energy source by oxidizing it.
Thiomonas bhubaneswarensis is a Gram-negative, oxidase- and catalase-positive, strictly aerobic, moderately thermophilic non-spore-forming, rod-shaped, motile bacterium with a single polar flagellum from the genus Thiomonas, which was isolated from hot-spring sediment samples in Atri in Bhubaneswar. T. bhubaneswarensis has the ability to oxidize thiosulfate.
Thiomonas cuprina is an As(III)-oxidizing bacterium from the genus Thiomonas. It is proposed to be reclassified, along with Thiomonas arsenivorans, as strains of Thiomonas delicata.
Thiomonas islandica is a Gram-negative, rod-shaped, motile bacterium from the genus Thiomonas, which has the ability to oxidise sulfur compounds and hydrogen. It was isolated from a hot spring in Graendalur in southwestern Iceland.
Thiomonas thermosulfata is a Gram-negative, non-spore-forming bacterium from the genus Thiomonas.
Acidithiobacillus caldus formerly belonged to the genus Thiobacillus prior to 2000, when it was reclassified along with a number of other bacterial species into one of three new genera that better categorize sulfur-oxidizing acidophiles. As a member of the Gammaproteobacteria class of Pseudomonadota, A. caldus may be identified as a Gram-negative bacterium that is frequently found in pairs. Considered to be one of the most common microbes involved in biomining, it is capable of oxidizing reduced inorganic sulfur compounds (RISCs) that form during the breakdown of sulfide minerals. The meaning of the prefix acidi- in the name Acidithiobacillus comes from the Latin word acidus, signifying that members of this genus love a sour, acidic environment. Thio is derived from the Greek word thios and describes the use of sulfur as an energy source, and bacillus describes the shape of these microorganisms, which are small rods. The species name, caldus, is derived from the Latin word for warm or hot, denoting this species' love of a warm environment.
Anaerocella delicata is a Gram-negative, non-spore-forming, anaerobic and non-motile bacterium from the genus of Anaerocella which has been isolated from a methanogenic reactor of cattle waste in Hokkaido in Japan.
Kyrpidia is a genus of Gram-positive, rod-shaped, thermophilic, spore-forming bacteria.
Nitrospinota is a bacterial phylum. Despite only few described species, members of this phylum are major nitrite-oxidizing bacteria in surface waters in oceans. By oxidation of nitrite to nitrate they are important in the process of nitrification in marine environments.