Waterlogging (agriculture)

Last updated
Crop yield (Y) and depth of water table (X in dm). At shallow depth the yield reduces. R-3VAR1.JPG
Crop yield (Y) and depth of water table (X in dm). At shallow depth the yield reduces.
Antique Dutch windmills used to pump water into the embanked river to prevent waterlogging of the lowlands (polders) behind them. KinderdijkMolens02.jpg
Antique Dutch windmills used to pump water into the embanked river to prevent waterlogging of the lowlands (polders) behind them.

Waterlogging water is the saturation of soil with water. [1] Soil may be regarded as waterlogged when it is nearly saturated with water much of the time such that its air phase is restricted and anaerobic conditions prevail. In extreme cases of prolonged waterlogging, anaerobiosis occurs, the roots of mesophytes suffer, and the subsurface reducing atmosphere leads to such processes as denitrification, methanogenesis, and the reduction of iron and manganese oxides. [2]

Contents

All plants, including crops require air (specifically, oxygen) to respire, produce energy and keep their cells alive. In agriculture, waterlogging of the soil typically blocks air from getting in to the roots. [3] With the exception of rice (Oryza sativa), [4] [5] most crops like maize and potato, [6] [7] [8] are therefore highly intolerant to waterlogging. Plant cells use a variety of signals such the oxygen concentration, [9] plant hormones like ethylene, [10] [11] energy and sugar status [12] [13] to acclimate to waterlogging-induced oxygen deprivation. Roots can survive waterlogging by forming aerenchyma, inducing anaerobic metabolism and changing their root system architecture [14] .

In irrigated agricultural land, waterlogging is often accompanied by soil salinity as waterlogged soils prevent leaching of the salts imported by the irrigation water.

From a gardening point of view, waterlogging is the process whereby the soil hardens to the point where neither air nor water can soak through.

See also

Related Research Articles

Abiotic stress is the negative impact of non-living factors on the living organisms in a specific environment. The non-living variable must influence the environment beyond its normal range of variation to adversely affect the population performance or individual physiology of the organism in a significant way.

<span class="mw-page-title-main">Hypoxia (medical)</span> Medical condition of lack of oxygen in the tissues

Hypoxia is a condition in which the body or a region of the body is deprived of adequate oxygen supply at the tissue level. Hypoxia may be classified as either generalized, affecting the whole body, or local, affecting a region of the body. Although hypoxia is often a pathological condition, variations in arterial oxygen concentrations can be part of the normal physiology, for example, during strenuous physical exercise.

<span class="mw-page-title-main">Root</span> Basal organ of a vascular plant

In vascular plants, the roots are the organs of a plant that are modified to provide anchorage for the plant and take in water and nutrients into the plant body, which allows plants to grow taller and faster. They are most often below the surface of the soil, but roots can also be aerial or aerating, that is, growing up above the ground or especially above water.

<span class="mw-page-title-main">Plant hormone</span> Chemical compounds that regulate plant growth and development

Plant hormones are signal molecules, produced within plants, that occur in extremely low concentrations. Plant hormones control all aspects of plant growth and development, from embryogenesis, the regulation of organ size, pathogen defense, stress tolerance and through to reproductive development. Unlike in animals each plant cell is capable of producing hormones. Went and Thimann coined the term "phytohormone" and used it in the title of their 1937 book.

<span class="mw-page-title-main">Ripening</span> Process in fruits that causes them to become more palatable

Ripening is a process in fruits that causes them to become more palatable. In general, fruit becomes sweeter, less green, and softer as it ripens. Even though the acidity of fruit increases as it ripens, the higher acidity level does not make the fruit seem tarter. This effect is attributed to the Brix-Acid Ratio. Climacteric fruits ripen after harvesting and so some fruits for market are picked green.

<span class="mw-page-title-main">Altitude training</span> Athletic training at high elevations

Altitude training is the practice by some endurance athletes of training for several weeks at high altitude, preferably over 2,400 metres (8,000 ft) above sea level, though more commonly at intermediate altitudes due to the shortage of suitable high-altitude locations. At intermediate altitudes, the air still contains approximately 20.9% oxygen, but the barometric pressure and thus the partial pressure of oxygen is reduced.

Hypoxia-inducible factors (HIFs) are transcription factors that respond to decreases in available oxygen in the cellular environment, or hypoxia. They are only present in parahoxozoan animals.

<span class="mw-page-title-main">Aerenchyma</span>

Aerenchyma or aeriferous parenchyma or lacunae, is a modification of the parenchyma to form a spongy tissue that creates spaces or air channels in the leaves, stems and roots of some plants, which allows exchange of gases between the shoot and the root. The channels of air-filled cavities provide a low-resistance internal pathway for the exchange of gases such as oxygen, carbon dioxide and ethylene between the plant above the water and the submerged tissues. Aerenchyma is also widespread in aquatic and wetland plants which must grow in hypoxic soils.

Ecophysiology, environmental physiology or physiological ecology is a biological discipline that studies the response of an organism's physiology to environmental conditions. It is closely related to comparative physiology and evolutionary physiology. Ernst Haeckel's coinage bionomy is sometimes employed as a synonym.

<span class="mw-page-title-main">Transport protein</span> Protein that moves other materials within an organism

A transport protein is a protein that serves the function of moving other materials within an organism. Transport proteins are vital to the growth and life of all living things. There are several different kinds of transport proteins.

<span class="mw-page-title-main">HIF1A</span> Protein-coding gene in the species Homo sapiens

Hypoxia-inducible factor 1-alpha, also known as HIF-1-alpha, is a subunit of a heterodimeric transcription factor hypoxia-inducible factor 1 (HIF-1) that is encoded by the HIF1A gene. The Nobel Prize in Physiology or Medicine 2019 was awarded for the discovery of HIF.

Soil microbiology is the study of microorganisms in soil, their functions, and how they affect soil properties. It is believed that between two and four billion years ago, the first ancient bacteria and microorganisms came about on Earth's oceans. These bacteria could fix nitrogen, in time multiplied, and as a result released oxygen into the atmosphere. This led to more advanced microorganisms, which are important because they affect soil structure and fertility. Soil microorganisms can be classified as bacteria, actinomycetes, fungi, algae and protozoa. Each of these groups has characteristics that define them and their functions in soil.

Fish are exposed to large oxygen fluctuations in their aquatic environment since the inherent properties of water can result in marked spatial and temporal differences in the concentration of oxygen. Fish respond to hypoxia with varied behavioral, physiological, and cellular responses to maintain homeostasis and organism function in an oxygen-depleted environment. The biggest challenge fish face when exposed to low oxygen conditions is maintaining metabolic energy balance, as 95% of the oxygen consumed by fish is used for ATP production releasing the chemical energy of nutrients through the mitochondrial electron transport chain. Therefore, hypoxia survival requires a coordinated response to secure more oxygen from the depleted environment and counteract the metabolic consequences of decreased ATP production at the mitochondria.

Pierdomenico Perata is an Italian physiologist whose activities are focused on plant physiology and plant biology. Since 8 May 2013 he has been the rector of the Scuola Superiore Sant’Anna.

Julia Bailey-Serres is professor of genetics, director of the Center for Plant Cell Biology, and a member of the Institute for Integrative Genome Biology at the University of California, Riverside. Her accomplishments include the pioneering of methods for profiling the "translatomes" of discrete cell-types of plants and identification of a homeostatic sensor of oxygen deprivation in plants.

Gaseous signaling molecules are gaseous molecules that are either synthesized internally (endogenously) in the organism, tissue or cell or are received by the organism, tissue or cell from outside and that are used to transmit chemical signals which induce certain physiological or biochemical changes in the organism, tissue or cell. The term is applied to, for example, oxygen, carbon dioxide, sulfur dioxide, nitrous oxide, hydrogen cyanide, ammonia, methane, hydrogen, ethylene, etc.

<span class="mw-page-title-main">Phytoglobin</span>

Phytoglobins are globular plant proteins classified into the globin superfamily, which contain a heme, i.e. protoporphyrin IX-Fe, prosthetic group. The earliest known phytoglobins are leghemoglobins, discovered in 1939 by Kubo after spectroscopic and chemical analysis of the red pigment of soybean root nodules. A few decades after Kubo's report the crystallization of a lupin phytoglobin by Vainshtein and collaborators revealed that the tertiary structure of this protein and that of the sperm whale myoglobin was remarkably similar, thus indicating that the phytoglobin discovered by Kubo did indeed correspond to a globin.

<span class="mw-page-title-main">Ethene (plant hormone)</span> Alkene gas naturally regulating the plant growth

Ethylene (CH
2
=CH
2
) is an unsaturated hydrocarbon gas (alkene) acting as a naturally occurring plant hormone. It is the simplest alkene gas and is the first gas known to act as hormone. It acts at trace levels throughout the life of the plant by stimulating or regulating the ripening of fruit, the opening of flowers, the abscission (or shedding) of leaves and, in aquatic and semi-aquatic species, promoting the 'escape' from submergence by means of rapid elongation of stems or leaves. This escape response is particularly important in rice farming. Commercial fruit-ripening rooms use "catalytic generators" to make ethylene gas from a liquid supply of ethanol. Typically, a gassing level of 500 to 2,000 ppm is used, for 24 to 48 hours. Care must be taken to control carbon dioxide levels in ripening rooms when gassing, as high temperature ripening (20 °C; 68 °F) has been seen to produce CO2 levels of 10% in 24 hours.

Malcolm Bennett, a Fellow of the Royal Society, is Professor of Plant Science at the University of Nottingham.

Aerotropism or oxytropism is the growth of an organism either toward or away from a source of air/oxygen. Evidence of this behavior has been recorded in plants, bacteria, and fungi.

References

  1. "waterlog - definition of waterlog in English | Oxford Dictionaries". Oxford Dictionaries | English. Retrieved 2017-03-10.[ dead link ]
  2. Hillel, Daniel (2004). Introduction to Environmental Soil Physics . United States of America: Elsevier Academic Press. pp.  441. ISBN   0-12-348655-6.
  3. Sasidharan, Rashmi; Hartman, Sjon; Liu, Zeguang; Martopawiro, Shanice; Sajeev, Nikita; van Veen, Hans; Yeung, Elaine; Voesenek, Laurentius A. C. J. (February 2018). "Signal Dynamics and Interactions during Flooding Stress". Plant Physiology. 176 (2): 1106–1117. doi:10.1104/pp.17.01232. PMC   5813540 . PMID   29097391.
  4. Hattori, Yoko; Nagai, Keisuke; Furukawa, Shizuka; Song, Xian-Jun; Kawano, Ritsuko; Sakakibara, Hitoshi; Wu, Jianzhong; Matsumoto, Takashi; Yoshimura, Atsushi; Kitano, Hidemi; Matsuoka, Makoto; Mori, Hitoshi; Ashikari, Motoyuki (August 2009). "The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water". Nature. 460 (7258): 1026–1030. Bibcode:2009Natur.460.1026H. doi:10.1038/nature08258. PMID   19693083. S2CID   4428878.
  5. Xu, Kenong; Xu, Xia; Fukao, Takeshi; Canlas, Patrick; Maghirang-Rodriguez, Reycel; Heuer, Sigrid; Ismail, Abdelbagi M.; Bailey-Serres, Julia; Ronald, Pamela C.; Mackill, David J. (August 2006). "Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice". Nature. 442 (7103): 705–708. Bibcode:2006Natur.442..705X. doi:10.1038/nature04920. PMID   16900200. S2CID   4404518.
  6. Sanclemente, Maria-Angelica; Ma, Fangfang; Liu, Peng; Della Porta, Adriana; Singh, Jugpreet; Wu, Shan; Colquhoun, Thomas; Johnson, Timothy; Guan, Jiahn-Chou; Koch, Karen E (15 March 2021). "Sugar modulation of anaerobic-response networks in maize root tips". Plant Physiology. 185 (2): 295–317. doi:10.1093/plphys/kiaa029. PMC   8133576 . PMID   33721892.
  7. Hartman, Sjon (15 March 2021). "Averting a sweet demise: sugars change the transcriptional hypoxia response in maize roots". Plant Physiology. 185 (2): 280–281. doi:10.1093/plphys/kiaa053. PMC   8133570 . PMID   33721906.
  8. Hartman, Sjon; van Dongen, Nienke; Renneberg, Dominique M.H.J.; Welschen-Evertman, Rob A.M.; Kociemba, Johanna; Sasidharan, Rashmi; Voesenek, Laurentius A.C.J. (13 August 2020). "Ethylene Differentially Modulates Hypoxia Responses and Tolerance across Solanum Species". Plants. 9 (8): 1022. doi: 10.3390/plants9081022 . PMC   7465973 . PMID   32823611.
  9. Gibbs, Daniel J.; Lee, Seung Cho; Md Isa, Nurulhikma; Gramuglia, Silvia; Fukao, Takeshi; Bassel, George W.; Correia, Cristina Sousa; Corbineau, Françoise; Theodoulou, Frederica L.; Bailey-Serres, Julia; Holdsworth, Michael J. (November 2011). "Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants". Nature. 479 (7373): 415–418. Bibcode:2011Natur.479..415G. doi:10.1038/nature10534. PMC   3223408 . PMID   22020279.
  10. Hartman, Sjon; Sasidharan, Rashmi; Voesenek, Laurentius A. C. J. (January 2021). "The role of ethylene in metabolic acclimations to low oxygen". New Phytologist. 229 (1): 64–70. doi:10.1111/nph.16378. PMC   7754284 . PMID   31856295.
  11. Liu, Zeguang; Hartman, Sjon; van Veen, Hans; Zhang, Hongtao; Leeggangers, Hendrika A C F; Martopawiro, Shanice; Bosman, Femke; de Deugd, Florian; Su, Peng; Hummel, Maureen; Rankenberg, Tom; Hassall, Kirsty L; Bailey-Serres, Julia; Theodoulou, Frederica L; Voesenek, Laurentius A C J; Sasidharan, Rashmi (30 May 2022). "Ethylene augments root hypoxia tolerance via growth cessation and reactive oxygen species amelioration". Plant Physiology. 190 (2): 1365–1383. doi:10.1093/plphys/kiac245. PMC   9516759 . PMID   35640551.
  12. Cho, Hsing‐Yi; Loreti, Elena; Shih, Ming‐Che; Perata, Pierdomenico (January 2021). "Energy and sugar signaling during hypoxia". New Phytologist. 229 (1): 57–63. doi: 10.1111/nph.16326 . PMID   31733144. S2CID   208086520.
  13. Schmidt, Romy R.; Fulda, Martin; Paul, Melanie V.; Anders, Max; Plum, Frederic; Weits, Daniel A.; Kosmacz, Monika; Larson, Tony R.; Graham, Ian A.; Beemster, Gerrit T. S.; Licausi, Francesco; Geigenberger, Peter; Schippers, Jos H.; van Dongen, Joost T. (18 December 2018). "Low-oxygen response is triggered by an ATP-dependent shift in oleoyl-CoA in Arabidopsis". Proceedings of the National Academy of Sciences. 115 (51): E12101–E12110. Bibcode:2018PNAS..11512101S. doi: 10.1073/pnas.1809429115 . PMC   6304976 . PMID   30509981.
  14. Daniel, Kevin; Hartman, Sjon (23 August 2023). "How plant roots respond to waterlogging". Journal of Experimental Botany. doi:10.1093/jxb/erad332.