Related Research Articles
The Crenarchaeota are archaea that have been classified as a phylum of the Archaea domain. Initially, the Crenarchaeota were thought to be sulfur-dependent extremophiles but recent studies have identified characteristic Crenarchaeota environmental rRNA indicating the organisms may be the most abundant archaea in the marine environment. Originally, they were separated from the other archaea based on rRNA sequences; other physiological features, such as lack of histones, have supported this division, although some crenarchaea were found to have histones. Until recently all cultured Crenarchaea had been thermophilic or hyperthermophilic organisms, some of which have the ability to grow at up to 113 °C. These organisms stain Gram negative and are morphologically diverse having rod, cocci, filamentous and oddly shaped cells.
The Gemmatimonadetes are a phylum of bacteria established in 2003. The phylum contains two classes Gemmatimonadetes and Longimicrobia.
Pseudomonas moraviensis is a Gram-negative soil bacterium. It is named after Moravia, the region of the Czech Republic where it was first isolated. The type strain is CCM 7280T.
Cupriavidus is a genus of bacteria that includes the former genus Wautersia. They are characterized as Gram-negative, motile, rod-shaped organisms with oxidative metabolism. They possess peritrichous flagella, are obligate aerobic organisms, and are chemoorganotrophic or chemolithotrophic. Resistance to metals has been described. These organisms have been found in both soil and in clinical isolates.
Halopiger is a genus of archaeans in the family Halobacteriaceae that have high tolerance to salinity.
Arcanobacterium is a genus of bacteria. They are gram-positive, non–acid fast, nonmotile, facultatively anaerobic, and non–endospore forming. They are widely distributed in nature in the microbiota of animals and are mostly innocuous. Some can cause disease in humans and other animals. As with various species of a microbiota, they usually are not pathogenic but can occasionally opportunistically capitalize on atypical access to tissues or weakened host defenses.
Mariprofundus ferrooxydans is a neutrophilic, chemolithotrophic, Gram-negative bacterium which can grow by oxidising ferrous to ferric iron. It is one of the few members of the class Zetaproteobacteria in the phylum Proteobacteria.
Polynucleobacter is a genus of Proteobacteria, originally established by Heckmann and Schmidt (1987) to exclusively harbor obligate endosymbionts of ciliates belonging to the genus Euplotes.
Limnohabitans is a genus of Proteobacteria established by Hahn et al. (2010). The genus contains four species which all represent planktonic bacteria dwelling in the water column of freshwater lakes, reservoirs, and streams.
Collimonas pratensis is a bacterium of the genus Collimonas in the Oxalobacteraceae family which was isolated with Collimonas arenae from seminatural grassland soils in the Netherlands. C. pratensis grows in meadow soils.
Pseudoduganella violaceinigra is a mesophilic bacterium of the genus Duganella in the Oxalobacteraceae family which was isolated from forest soil in Yunnan Province in China.
Limnohabitans curvus is an aerobic, nonmotile bacterium from the genus Limnohabitans and family Comamonadaceae, which was isolated from the pelagic zone from a freshwater lake in Mondsee in Austria.
Limnohabitans parvus is a Gram-negative, aerobic, oxidase- and catalase-positive, unpigmented, short-rod-shaped, nonmotile bacterium from the genus Limnohabitans, which was isolated with Limnohabitans planktonicus from the mesoeutrophic freshwater reservoir in Římov in the Czech Republic.
Variovorax ginsengisoli is a Gram-negative, non-spore-forming, rod-shaped, motile bacterium from the genus Variovorax, which was isolated from soil from a ginseng field in Pocheon in South Korea. Colonies of V. ginsengisoli are yellowish in color.
Cupriavidus laharis is a Gram-negative, oxidase- and catalase-positive, hydrogen-oxidizing, aerobic, non-spore-forming, motile bacterium with peritrichous flagella of the genus Cupriavidus and family Burkholderiaceae which was isolated from volcanic mudflow deposits on Mt. Pinatubo in the Philippines. Colonies of Cupriavidus laharis are opaque and white.
Cupriavidus pinatubonensis is a Gram-negative, aerobic non-spore-forming, motile bacterium of the genus Cupriavidus and family Burkholderiaceae, isolated with Cupriavidus laharis together from volcanic mudflow deposits on Mt. Pinatubo in the Philippines.
Limnobacter litoralis is a Gram-negative, oxidase- and catalase-positive, non-spore-forming, thiosulfate-oxidizing, anaerobic bacterium of the genus Limnobacter and family Burkholderiaceae, isolated from a 22-year-old volcanic deposit on the island of Miyake in Japan.
Pandoraea thiooxydans is a Gram-negative, oxidase-positive, catalase-negative, aerobic, thiosulfate-oxidizing, rod-shaped, motile bacterium with a single polar flagellum, of the genus Pandoraea, isolated from rhizosphere soils of sesame in Junghwa-dong in the Republic of Korea.
The two members of Tetrathiobacter were transferred to Advenella mimigardefordensis and Advenella kashmirensis.
Lactobacillus fabifermentans is a member of the genus Lactobacillus, the most diverse genus among lactic acid bacteria (LAB), a group of Gram-positive bacteria that produce lactic acid as their major fermented end product and that are often involved in food fermentation. L. fabifermentans was proposed in 2009 as a new species, after the type strain LMG 24284T has been isolated from Ghanaian cocoa fermentation. Analysis of the 16S rRNA gene sequence demonstrated that this species is a member of the Lactobacillus plantarum species group but further analysis demonstrated that it is possible to differentiate it from the nearest neighbors by means of DNA-DNA hybridization experiments, pheS sequence analysis, whole-cell protein electrophoresis, fluorescent amplified fragment length polymorphism analysis and biochemical characterization.
References
- ↑ "LPSN" . Retrieved 2013-07-17.
- ↑ Straininfo of Advenella kashmirensis
- ↑ Uniprot
- ↑ Ghosh, W; Bagchi, A; Mandal, S; Dam, B; Roy, P (2005). "Tetrathiobacter kashmirensis gen. nov., sp. nov., a novel mesophilic, neutrophilic, tetrathionate-oxidizing, facultatively chemolithotrophic betaproteobacterium isolated from soil from a temperate orchard in Jammu and Kashmir, India". Int J Syst Evol Microbiol. 55 (Pt 5): 1779–87. doi: 10.1099/ijs.0.63595-0 . PMID 16166666.
- ↑ KEEG GENOME: Advenella kashmirensis
- ↑ Gibello, A; Vela, AI; Martín, M; Barra-Caracciolo, A; Grenni, P; Fernández-Garayzábal, JF (2009). "Reclassification of the members of the genus Tetrathiobacter Ghosh et al. 2005 to the genus Advenella Coenye et al. 2005". Int J Syst Evol Microbiol. 59 (Pt 8): 1914–8. doi: 10.1099/ijs.0.007443-0 . PMID 19567588.
- ↑ International Journal of Systematic and Evolutionary Microbiology
- ↑ UniProt
- ↑ Journal of Bacteriology