Apedinella | |
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Scientific classification ![]() | |
Domain: | Eukaryota |
Clade: | Diaphoretickes |
Clade: | SAR |
Clade: | Stramenopiles |
Phylum: | Gyrista |
Subphylum: | Ochrophytina |
Class: | Dictyochophyceae |
Order: | Pedinellales |
Family: | Pedinellaceae |
Genus: | Apedinella Throndsen |
Species: | A. radians |
Binomial name | |
Apedinella radians (Lohmann) P.H.Campbell | |
Apedinella, also called Pedinellophyceae, is a small group of heterokonts (stramenopelis) with one species, the Apedinella radians. It is assigned to the class Dictyochophyceae and the order of Pedinellaceae. [1] [2] It is a single cell marine phytoflagellate algae with chloroplasts found in seas all over the world.
The Apedinella cells have an apple like shape with one flagellum, containing mastigonemes, emerging as the stem. The cell diameter is about 7,5-12 micrometres and the calculated volume is between 221 and 904 micrometres ^3. [3] The cell has radical symmetry. Each side had 3 symmetrical chloroplasts with big pyrenoids, which are laying more towards the inner side of the cell. The dictyosome is located more posterior and the nucleus is in the centre of the cell. [4]
The cells have two kinds of scales: ovoid bodies and elongated spine-scales. The whole cell surface is covered in the ovoid bodies and the cell has six long and slender spine scales, which help the cell undergo reorientation while swimming. The cells are also capable of changing direction without repositioning these spine-scales. The cytoskeleton shows a high complexity for a cell this small. It has an extensive microtubular network and a system of both actin and centrin filamentous bundles.
Spine scales are long cellulosic scales that are normally posterior in a cone shape behind the cell while swimming. When the cell changes swimming direction, the spine-scales reorientate laterally for a short amount of time and then they return to the posterior position. They vary in length from 10 micrometre to 26 micrometers. [4]
The spine scales are attached to plaques, which lay in between the chloroplasts and on the upper half of the cell. The plaques are positioned just under the plasma membrane. This attachment is mediated via external micro ligaments. These micro ligaments themselves cannot contract, but they do act as a hinge for when the spine scales undergo reorientation.
Each plaque is attached too actin and centrin filamentous bundles. If these bundles shorten the opposite plaques will move about 30% closer to each other and move deeper into the cell, more in between the chloroplasts. This causes the spine-scales to be moved into a more lateral position.
The cell cycle of A. radians can be divided into four phases: interphase, pre-division, cell division and post-division. [4]
During pre-division, six new spine scales are created and secreted. The new spine scales are formed in spine-scale forming vesicles (SSFV). Densely packed tubular material is present in the SSFV, and they run down the length of the SSFV as the spine-scale is formed. The tubular material forms one spine-scale at the time. When created, the spine-scales look like they are extracellular, but they are still surrounded by this SSFV extension and, which makes them not restricted by the cell size. The spine-scales are created posterior of the cell and then they are moved anteriorly below the cell equator, where they stay until the actual cell division. The new spine-scales are passively attached, so they can’t change position like the old spine-scales, because they are not attached to the plaques.
The second type of scales, the body scales, are formed in specialized body scale forming vesicles (BSFV). The BSFVs also contain actin around the circumference, and they are present on the posterior side of the cell and are secreted from this region as well.
A scale associated protein (SAP) is a cell surface component that has been found to play a role in adhesion of the scales [5]
The cytoskeleton is a complex, dynamic network of interlinking protein filaments present in the cytoplasm of all cells, including those of bacteria and archaea. In eukaryotes, it extends from the cell nucleus to the cell membrane and is composed of similar proteins in the various organisms. It is composed of three main components: microfilaments, intermediate filaments, and microtubules, and these are all capable of rapid growth or disassembly depending on the cell's requirements.
Microvilli are microscopic cellular membrane protrusions that increase the surface area for diffusion and minimize any increase in volume, and are involved in a wide variety of functions, including absorption, secretion, cellular adhesion, and mechanotransduction.
Cytokinesis is the part of the cell division process and part of mitosis during which the cytoplasm of a single eukaryotic cell divides into two daughter cells. Cytoplasmic division begins during or after the late stages of nuclear division in mitosis and meiosis. During cytokinesis the spindle apparatus partitions and transports duplicated chromatids into the cytoplasm of the separating daughter cells. It thereby ensures that chromosome number and complement are maintained from one generation to the next and that, except in special cases, the daughter cells will be functional copies of the parent cell. After the completion of the telophase and cytokinesis, each daughter cell enters the interphase of the cell cycle.
Pedinellales (ICN) or Pedinellida (ICZN) is a group of single-celled algae found in both marine environments and freshwater.
Microfilaments, also called actin filaments, are protein filaments in the cytoplasm of eukaryotic cells that form part of the cytoskeleton. They are primarily composed of polymers of actin, but are modified by and interact with numerous other proteins in the cell. Microfilaments are usually about 7 nm in diameter and made up of two strands of actin. Microfilament functions include cytokinesis, amoeboid movement, cell motility, changes in cell shape, endocytosis and exocytosis, cell contractility, and mechanical stability. Microfilaments are flexible and relatively strong, resisting buckling by multi-piconewton compressive forces and filament fracture by nanonewton tensile forces. In inducing cell motility, one end of the actin filament elongates while the other end contracts, presumably by myosin II molecular motors. Additionally, they function as part of actomyosin-driven contractile molecular motors, wherein the thin filaments serve as tensile platforms for myosin's ATP-dependent pulling action in muscle contraction and pseudopod advancement. Microfilaments have a tough, flexible framework which helps the cell in movement.
The microtubule-organizing center (MTOC) is a structure found in eukaryotic cells from which microtubules emerge. MTOCs have two main functions: the organization of eukaryotic flagella and cilia and the organization of the mitotic and meiotic spindle apparatus, which separate the chromosomes during cell division. The MTOC is a major site of microtubule nucleation and can be visualized in cells by immunohistochemical detection of γ-tubulin. The morphological characteristics of MTOCs vary between the different phyla and kingdoms. In animals, the two most important types of MTOCs are 1) the basal bodies associated with cilia and flagella and 2) the centrosome associated with spindle formation.
Cell junctions or junctional complexes are a class of cellular structures consisting of multiprotein complexes that provide contact or adhesion between neighboring cells or between a cell and the extracellular matrix in animals. They also maintain the paracellular barrier of epithelia and control paracellular transport. Cell junctions are especially abundant in epithelial tissues. Combined with cell adhesion molecules and extracellular matrix, cell junctions help hold animal cells together.
In mammalian cells, vinculin is a membrane-cytoskeletal protein in focal adhesion plaques that is involved in linkage of integrin adhesion molecules to the actin cytoskeleton. Vinculin is a cytoskeletal protein associated with cell-cell and cell-matrix junctions, where it is thought to function as one of several interacting proteins involved in anchoring F-actin to the membrane.
A growth cone is a large actin-supported extension of a developing or regenerating neurite seeking its synaptic target. It is the growth cone that drives axon growth. Their existence was originally proposed by Spanish histologist Santiago Ramón y Cajal based upon stationary images he observed under the microscope. He first described the growth cone based on fixed cells as "a concentration of protoplasm of conical form, endowed with amoeboid movements". Growth cones are situated on the tips of neurites, either dendrites or axons, of the nerve cell. The sensory, motor, integrative, and adaptive functions of growing axons and dendrites are all contained within this specialized structure.
In biology, a protein filament is a long chain of protein monomers, such as those found in hair, muscle, or in flagella. Protein filaments form together to make the cytoskeleton of the cell. They are often bundled together to provide support, strength, and rigidity to the cell. When the filaments are packed up together, they are able to form three different cellular parts. The three major classes of protein filaments that make up the cytoskeleton include: actin filaments, microtubules and intermediate filaments.
Talin is a high-molecular-weight cytoskeletal protein concentrated at regions of cell–substratum contact and, in lymphocytes, at cell–cell contacts. Discovered in 1983 by Keith Burridge and colleagues, talin is a ubiquitous cytosolic protein that is found in high concentrations in focal adhesions. It is capable of linking integrins to the actin cytoskeleton either directly or indirectly by interacting with vinculin and α-actinin.
Ochrophytes, also known as heterokontophytes or stramenochromes, are a group of algae. They are the photosynthetic stramenopiles, a group of eukaryotes, organisms with a cell nucleus, characterized by the presence of two unequal flagella, one of which has tripartite hairs called mastigonemes. In particular, they are characterized by photosynthetic organelles or plastids enclosed by four membranes, with membrane-bound compartments called thylakoids organized in piles of three, chlorophyll a and c as their photosynthetic pigments, and additional pigments such as β-carotene and xanthophylls. Ochrophytes are one of the most diverse lineages of eukaryotes, containing ecologically important algae such as brown algae and diatoms. They are classified either as phylum Ochrophyta or Heterokontophyta, or as subphylum Ochrophytina within phylum Gyrista. Their plastids are of red algal origin.
Amoeboid movement is the most typical mode of locomotion in adherent eukaryotic cells. It is a crawling-like type of movement accomplished by protrusion of cytoplasm of the cell involving the formation of pseudopodia ("false-feet") and posterior uropods. One or more pseudopodia may be produced at a time depending on the organism, but all amoeboid movement is characterized by the movement of organisms with an amorphous form that possess no set motility structures.
Actin remodeling is a biochemical process in cells. In the actin remodeling of neurons, the protein actin is part of the process to change the shape and structure of dendritic spines. G-actin is the monomer form of actin, and is uniformly distributed throughout the axon and the dendrite. F-actin is the polymer form of actin, and its presence in dendritic spines is associated with their change in shape and structure. Actin plays a role in the formation of new spines as well as stabilizing spine volume increase. The changes that actin brings about lead to the formation of new synapses as well as increased cell communication.
Actin remodeling is the biochemical process that allows for the dynamic alterations of cellular organization. The remodeling of actin filaments occurs in a cyclic pattern on cell surfaces and exists as a fundamental aspect to cellular life. During the remodeling process, actin monomers polymerize in response to signaling cascades that stem from environmental cues. The cell's signaling pathways cause actin to affect intracellular organization of the cytoskeleton and often consequently, the cell membrane. Again triggered by environmental conditions, actin filaments break back down into monomers and the cycle is completed. Actin-binding proteins (ABPs) aid in the transformation of actin filaments throughout the actin remodeling process. These proteins account for the diverse structure and changes in shape of Eukaryotic cells. Despite its complexity, actin remodeling may result in complete cytoskeletal reorganization in under a minute.
In structural and cell biology, the focal adhesion targeting domain is a conserved protein domain that was first identified in focal adhesion kinase (FAK), also known as PTK2 protein tyrosine kinase 2 (PTK2).
The cell membrane is a biological membrane that separates and protects the interior of a cell from the outside environment. The cell membrane consists of a lipid bilayer, made up of two layers of phospholipids with cholesterols interspersed between them, maintaining appropriate membrane fluidity at various temperatures. The membrane also contains membrane proteins, including integral proteins that span the membrane and serve as membrane transporters, and peripheral proteins that loosely attach to the outer (peripheral) side of the cell membrane, acting as enzymes to facilitate interaction with the cell's environment. Glycolipids embedded in the outer lipid layer serve a similar purpose.
Synaptic stabilization is crucial in the developing and adult nervous systems and is considered a result of the late phase of long-term potentiation (LTP). The mechanism involves strengthening and maintaining active synapses through increased expression of cytoskeletal and extracellular matrix elements and postsynaptic scaffold proteins, while pruning less active ones. For example, cell adhesion molecules (CAMs) play a large role in synaptic maintenance and stabilization. Gerald Edelman discovered CAMs and studied their function during development, which showed CAMs are required for cell migration and the formation of the entire nervous system. In the adult nervous system, CAMs play an integral role in synaptic plasticity relating to learning and memory.
Plant nucleus movement is the movement of the cell nucleus in plants by the cytoskeleton.
The rhizoplast is an organelle present in a variety of flagellates, including ochrophyte and chlorophyte algae and some fungi. This term is used for a variety of striated, fibrous root-like structures that attach to the basal bodies (kinetosome) of the flagella and end in some other organelle. In the strictest sense, the term refers specifically to a type of root that is composed of contractile microfibrils of centrin and connects directly to the surface of the cell nucleus.