The Aquificota phylum is a diverse collection of bacteria that live in harsh environmental settings. The name Aquificota was given to this phylum based on an early genus identified within this group, Aquifex, which is able to produce water by oxidizing hydrogen. They have been found in springs, pools, and oceans. They are autotrophs, and are the primary carbon fixers in their environments. These bacteria are Gram-negative, non-spore-forming rods. They are true bacteria as opposed to the other inhabitants of extreme environments, the Archaea.
Enterobacterales is an order of Gram-negative, non-spore forming, facultatively anaerobic, rod-shaped bacteria with the class Gammaproteobacteria. The type genus of this order is Enterobacter.
The Caryophanaceae is a family of Gram-positive bacteria. In 2020, the now defunct family Planococcaceae was merged into Caryophanaceae to rectify a nomenclature anomaly. The type genus of this family is Caryophanon.
The Synergistota is a phylum of anaerobic bacteria that show Gram-negative staining and have rod/vibrioid cell shape. Although Synergistota have a diderm cell envelope, the genes for various proteins involved in lipopolysaccharides biosynthesis have not yet been detected in Synergistota, indicating that they may have an atypical outer cell envelope. The Synergistota inhabit a majority of anaerobic environments including animal gastrointestinal tracts, soil, oil wells, and wastewater treatment plants and they are also present in sites of human diseases such as cysts, abscesses, and areas of periodontal disease. Due to their presence at illness related sites, the Synergistota are suggested to be opportunistic pathogens but they can also be found in healthy individuals in the microbiome of the umbilicus and in normal vaginal flora. Species within this phylum have also been implicated in periodontal disease, gastrointestinal infections and soft tissue infections. Other species from this phylum have been identified as significant contributors in the degradation of sludge for production of biogas in anaerobic digesters and are potential candidates for use in renewable energy production through their production of hydrogen gas. All of the known Synergistota species and genera are presently part of a single class (Synergistia), order (Synergistiales), and family (Synergistaceae).
Coxiella refers to a genus of Gram-negative bacteria in the family Coxiellaceae. It is named after Herald Rea Cox (1907–1986), an American bacteriologist. It is one of the Gammaproteobacteria.
Rickettsiella is a genus of the family Coxiellaceae. It should not be confused with Rickettsia. It is currently considered of the Gammaproteobacteria. However, its placement under Coxiellaceae instead of Legionellaceae has been challenged.
Diplorickettsia massiliensis species is an obligate intracellular, gram negative bacterium isolated from Ixodes ricinus ticks collected in Slovak republic forest geographically from southeastern part of Rovinka in 2006. They belong to the gammaproteobacteria class and are non endospore forming, small rods usually grouped in pairs. The bacteria are non-motile, and 16S rRNA, rpoB, parC and ftsY gene sequencing indicate that this bacterium is clearly different from all other recognized species. An initial phylogenetic analysis based on 16S rRNA, clustered D. massiliensis with Rickettsiella grylli. Because of its low 16S rDNA similarity (94%) with R. grylli, it was classified as a new genus Diplorickettsia into the family Coxiellaceae and the order Legionellales. D. massiliensis strain 20B was identified in three patients with suspected tick-borne infections that exhibited a specific seroconversion. The evidence of infection was further reconfirmed by using PCR-assay, thus established its role as a human pathogen and later whole genome sequencing was performed.
The Yersiniaceae are a family of Gram-negative bacteria that includes some familiar pathogens. For example, the type genus Yersinia includes Yersinia pestis, the causative agent of plague. This family is a member of the order Enterobacterales in the class Gammaproteobacteria of the phylum Pseudomonadota.
The Erwiniaceae are a family of Gram-negative bacteria which includes a number of plant pathogens and insect endosymbionts. This family is a member of the order Enterobacterales in the class Gammaproteobacteria of the phylum Pseudomonadota. The type genus of this family is Erwinia.
The Pectobacteriaceae are a family of Gram-negative bacteria which largely consist of plant pathogens. This family is a member of the order Enterobacterales in the class Gammaproteobacteria of the phylum Pseudomonadota. The type species of this family is Pectobacterium.
The Hafniaceae are a family of Gram-negative bacteria. This family is a member of the order Enterobacterales in the class Gammaproteobacteria of the phylum Pseudomonadota. Genera in this family include the type genus Hafnia, along with Edwardsiella and Obesumbacterium.
The Budviciaceae are a family of Gram-negative bacteria. This family is a member of the order Enterobacterales in the class Gammaproteobacteria of the phylum Pseudomonadota. The type genus of this family is Budvicia.
Alteribacter is a genus of Gram-positive or Gram-variable, rod-shaped bacteria in the family Bacillaceae within the order Bacillales. The type species for this genus is Alteribacter auranticus.
Metasolibacillus is a genus of Gram-Positive rod-shaped bacteria in the family Caryophanaceae from the order Caryophanales. The type species of this genus is Metasolibacillus meyeri.
Metalysinibacillus is a genus of Gram-Positive rod-shaped bacteria in the family Caryophanaceae from the order Caryophanales. The type species of this genus is Metalysinibacillus jejuensis.
Metaplanococcus is a genus of Gram-Positive or Gram-variable, cocci or short rod-shaped bacteria in the family Caryophanaceae from the order Caryophanales. The type species of this genus is Metaplanococcus flavidus.
Mycolicibacter is a genus of Gram-Positive rod-shaped bacteria in the family Mycobacteriaceae from the order Mycobacteriales.
Mycobacteroides is a genus of Gram-Positive rod-shaped bacteria in the family Mycobacteriaceae from the order Mycobacteriales.
Natrialbales is an order of halophilic, chemoorganotrophic archaea within the class Haloarchaea. The type genus of this order is Natrialba.
Haloferacales is an order of halophilic, chemoorganotrophic or heterotrophic archaea within the class Haloarchaea. The type genus of this order is Haloferax.
