Fragilariopsis cylindrus

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Fragilariopsis cylindrus
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Eukaryota
Clade: Diaphoretickes
Clade: SAR
Clade: Stramenopiles
Phylum: Gyrista
Subphylum: Ochrophytina
Class: Bacillariophyceae
Order: Bacillariales
Family: Bacillariaceae
Genus: Fragilariopsis
Species:
F. cylindrus
Binomial name
Fragilariopsis cylindrus
Synonyms [2]

Fragilariopsis cylindrus [3] is a sympagic (associated with sea ice) and/or planktonic bipolar pennate diatom that can form bloom in spring. [4] [5] This psychrophilic unicellular eukaryotic microalgae is an indicator of polar waters and the ecosystem associated with sea ice. [6] It is a model organism to understanding the ecophysiological and fundamental mechanisms of cold-adapted life. [7] [8]

Contents

Description

Fragilariopsis cylindrus is a pennate raphid diatom with a retangular cell with an elongated apical valve ranging from 15 to 55 μ and a transapical axis ranging from 2.4 to 4 μm [9] . Like other diatoms, F. cylindrus presents a cell wall composed of two biogenic silica valves, the frustule. It is also possible to note the presence of an eccentric raphe canal stretched by fibulae. The cell is generally presents two chloroplasts distributed at each pole of the cell surrounding the cell nucleus.

Life style

Fragilariopsis cylindrus is cracterised by a predominantly chain-formed colonial lifestyle and builds large populations at the bottom of sea ice (sea-ice water interface), as well as in the sea-ice margin zone which includes open water [6] [4] . It is known for its success in growing at temperatures below 0°C and has an optimum growth temperature of 4-5°C and an letal limit of ≤ +10°C [10] . As a sympagic microalgae , F. cylindrus can cope with a high salinity environment, typically found in brine channels, by producing large amounts of polysaccharide-rich extracellular polymeric substances (EPS) [11] .

F. cylindrus is a phototropic organism, but is able to sustain essential metabolic processes in the dark, ensuring rapid recovery upon re-illumination, and allowing them to survive long-term darkness. [12]

Related Research Articles

<span class="mw-page-title-main">Diatom</span> Class of microalgae found in oceans, waterways, and soil

A diatom is any member of a large group comprising several genera of algae, specifically microalgae, found in the oceans, waterways and soils of the world. Living diatoms make up a significant portion of the Earth's biomass: they generate about 20 to 50 percent of the oxygen produced on the planet each year, take in over 6.7 billion tonnes of silicon each year from the waters in which they live, and constitute nearly half of the organic material found in the oceans. The shells of dead diatoms can reach as much as a half-mile deep on the ocean floor, and the entire Amazon basin is fertilized annually by 27 million tons of diatom shell dust transported by transatlantic winds from the African Sahara, much of it from the Bodélé Depression, which was once made up of a system of fresh-water lakes.

<span class="mw-page-title-main">Nototheniidae</span> Family of fishes

Nototheniidae, the notothens or cod icefishes, is a family of ray-finned fishes, part of the suborder Notothenioidei which is traditionally placed within the order Perciformes. They are largely found in the Southern Ocean.

<span class="mw-page-title-main">Antifreeze protein</span> Class of peptides which help cells survive freezing conditions

Antifreeze proteins (AFPs) or ice structuring proteins refer to a class of polypeptides produced by certain animals, plants, fungi and bacteria that permit their survival in temperatures below the freezing point of water. AFPs bind to small ice crystals to inhibit the growth and recrystallization of ice that would otherwise be fatal. There is also increasing evidence that AFPs interact with mammalian cell membranes to protect them from cold damage. This work suggests the involvement of AFPs in cold acclimatization.

<span class="mw-page-title-main">Psychrophile</span> Organism capable of growing and reproducing in the cold

Psychrophiles or cryophiles are extremophilic organisms that are capable of growth and reproduction in low temperatures, ranging from −20 °C (−4 °F) to 20 °C (68 °F). They are found in places that are permanently cold, such as the polar regions and the deep sea. They can be contrasted with thermophiles, which are organisms that thrive at unusually high temperatures, and mesophiles at intermediate temperatures. Psychrophile is Greek for 'cold-loving', from Ancient Greek ψυχρός (psukhrós) 'cold, frozen'.

<span class="mw-page-title-main">Sympagic ecology</span> Ecology of ice and snow

A sympagic environment is one where water exists mostly as a solid, ice, such as a polar ice cap or glacier. Solid sea ice is permeated with channels filled with salty brine. These briny channels and the sea ice itself have its ecology, referred to as "sympagic ecology".

<span class="mw-page-title-main">Greenland shark</span> Species of shark

The Greenland shark, also known as the gurry shark or grey shark, is a large shark of the family Somniosidae, closely related to the Pacific and southern sleeper sharks. Inhabiting the North Atlantic and Arctic Oceans, they are notable for their exceptional longevity, although they are poorly studied due to the depth and remoteness of their natural habitat.

Ice algae are any of the various types of algal communities found in annual and multi-year sea, and terrestrial lake ice or glacier ice.

Antimargarita dulcis is a species of sea snail, a marine gastropod mollusk in the family Margaritidae.

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<span class="mw-page-title-main">Antarctic scallop</span> Genus of bivalves

The Antarctic scallop is a species of bivalve mollusc in the large family of scallops, the Pectinidae. It was thought to be the only species in the genus Adamussium until an extinct Pliocene species was described in 2016. Its exact relationship to other members of the Pectinidae is unclear. It is found in the ice-cold seas surrounding Antarctica, sometimes at great depths.

<span class="mw-page-title-main">Emerald rockcod</span> Species of fish

The emerald rockcod, also known as the emerald notothen is a species of marine ray-finned fish belonging to the family Nototheniidae, the notothens or cod icefishes. It is native to the Southern Ocean

<i>Fragilariopsis kerguelensis</i> Species of single-celled organism

Fragilariopsis kerguelensis, is a pennate diatom native to the Southern Ocean. It has been characterized as "the most abundant diatom in the Antarctic Seas".

<i>Phyllophora antarctica</i> Species of red alga that grows on the underside of sea ice in Antarctica

Phyllophora antarctica is a species of red alga in the family Phyllophoraceae. It is native to Antarctica where it grows in dim light on the underside of sea ice. Some of it becomes detached and accumulates in drifts on the seabed. Many different organisms live attached to the fronds or among them.

<i>Metridia gerlachei</i> Species of crustacean

Metridia gerlachei is a copepod found primarily in Antarctic and sub-Antarctic waters.

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<span class="mw-page-title-main">Highly branched isoprenoid</span> Chemical compound

Highly branched isoprenoids (HBIs) are long-chain alkenes produced by a small number of marine diatoms. There are a variety of highly branched isoprenoid structures, but C25 Highly branched isoprenoids containing one to three double bonds are the most common in the sedimentary record. Highly branched isoprenoids have been used as environmental proxies for sea ice conditions in the Arctic and Antarctic throughout the Holocene, and more recently, are being used to reconstruct more ancient ice records.

<span class="mw-page-title-main">Lake Washburn (Antarctica)</span> Former lake in Antarctica

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<i>Scottnema lindsayae</i> Species of roundworm

Scottnema lindsayae is a species of nematode belonging to the family Cephalobidae. First described in 1971, it is endemic to Antarctica and most commonly found in the McMurdo Dry Valleys. S. lindsayae, a microscopic worm, feeds on microbes, including bacteria, yeast, and algae. Adapted to very cold and dry climates, its population may be decreasing as a result of climate change.

A sea ice brine pocket is an area of fluid sea water with a high salt concentration trapped in sea ice as it freezes. Due to the nature of their formation, brine pockets are most commonly found in areas below −2 °C (28 °F), where it is sufficiently cold for seawater to freeze and form sea ice. Though the high salinity and low light conditions of brine pockets create a challenging environment for marine mammals, brine pockets serve as a habitat for various microbes. Sampling and studying these pockets requires specialized equipment to accommodate the hypersaline conditions and subzero temperatures.

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References

  1. Helmcke, J.-G. & Krieger, W. (1954). Diatomeenschalen im Elektronenmikroskopischen Bild. Bild u. Forsch. Abt. Biol. Berlin-Wilmersdorf 2: 1–24, pls 103–200.
  2. M.D. Guiry in Guiry, M.D. & Guiry, G.M. 2019. AlgaeBase. World-wide electronic publication, National University of Ireland, Galway. http://www.algaebase.org/search/species/detail/?species_id=38075  ; searched on 06 December 2019.
  3. Cefarelli, Adrián O.; Ferrario, Martha E.; Almandoz, Gastón O.; Atencio, Adrián G.; Akselman, Rut; Vernet, María (16 October 2010). "Diversity of the diatom genus Fragilariopsis in the Argentine Sea and Antarctic waters: morphology, distribution and abundance". Polar Biology. 33 (11): 1463–1484. doi: 10.1007/s00300-010-0794-z .
  4. 1 2 Kang, Sung-Ho; Fryxell, Greta A. (1992-11-01). "Fragilariopsis cylindrus (Grunow) Krieger: The most abundant diatom in water column assemblages of Antarctic marginal ice-edge zones". Polar Biology. 12 (6): 609–627. doi:10.1007/BF00236984. ISSN   1432-2056.
  5. Tammilehto, Anna; Watts, Phillip C.; Lundholm, Nina (2017). "Isolation by Time During an Arctic Phytoplankton Spring Bloom". Journal of Eukaryotic Microbiology. 64 (2): 248–256. doi:10.1111/jeu.12356. ISSN   1550-7408.
  6. 1 2 Quillfeldt, Cecilie H. von (2004). "The Diatom Fragilariopsis cylindrus and Its Potential As an Indicator Species for Cold Water Rather Than for Sea Ice". Vie et Milieu / Life & Environment (in French): 137.
  7. Mock, Thomas; Otillar, Robert P.; Strauss, Jan; McMullan, Mark; Paajanen, Pirita; Schmutz, Jeremy; Salamov, Asaf; Sanges, Remo; Toseland, Andrew; Ward, Ben J.; Allen, Andrew E.; Dupont, Christopher L.; Frickenhaus, Stephan; Maumus, Florian; Veluchamy, Alaguraj (January 2017). "Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus". Nature. 541 (7638): 536–540. doi: 10.1038/nature20803 . ISSN   1476-4687.
  8. Otte, Antonia; Winder, Johanna C.; Deng, Longji; Schmutz, Jeremy; Jenkins, Jerry; Grigoriev, Igor V.; Hopes, Amanda; Mock, Thomas (2023). "The diatom Fragilariopsis cylindrus: A model alga to understand cold-adapted life". Journal of Phycology. 59 (2): 301–306. doi:10.1111/jpy.13325. ISSN   1529-8817.
  9. Cefarelli, Adrián O.; Ferrario, Martha E.; Almandoz, Gastón O.; Atencio, Adrián G.; Akselman, Rut; Vernet, María (2010-11-01). "Diversity of the diatom genus Fragilariopsis in the Argentine Sea and Antarctic waters: morphology, distribution and abundance". Polar Biology. 33 (11): 1463–1484. doi:10.1007/s00300-010-0794-z. ISSN   1432-2056.
  10. Fiala, Michel; Oriol, Louise (1990-10-01). "Light-temperature interactions on the growth of Antarctic diatoms". Polar Biology. 10 (8): 629–636. doi:10.1007/BF00239374. ISSN   1432-2056.
  11. Aslam, Shazia N; Strauss, Jan; Thomas, David N; Mock, Thomas; Underwood, Graham J C (2018-05-01). "Identifying metabolic pathways for production of extracellular polymeric substances by the diatom Fragilariopsis cylindrus inhabiting sea ice". The ISME Journal. 12 (5): 1237–1251. doi:10.1038/s41396-017-0039-z. ISSN   1751-7362.
  12. Kennedy, Fraser; Martin, Andrew; Bowman, John P.; Wilson, Richard; McMinn, Andrew (7 May 2019). "Dark metabolism: a molecular insight into how the Antarctic sea-ice diatom Fragilariopsis cylindrus survives long-term darkness". New Phytologist. 223 (2): 675–691. doi:10.1111/nph.15843. PMC   6617727 . PMID   30985935.