Gram domain-containing 2A

Last updated
GRAMD2A
Identifiers
Aliases GRAMD2A , GRAMD2, GRAM domain containing 2A
External IDs MGI: 3528937 HomoloGene: 52791 GeneCards: GRAMD2A
Gene location (Human)
Ideogram human chromosome 15.svg
Chr. Chromosome 15 (human) [1]
Human chromosome 15 ideogram.svg
HSR 1996 II 3.5e.svg
Red rectangle 2x18.png
Band 15q23Start72,159,806 bp [1]
End72,197,787 bp [1]
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_001012642

NM_001033498
NM_001357686

RefSeq (protein)

NP_001012660

NP_001028670
NP_001344615

Location (UCSC) Chr 15: 72.16 – 72.2 Mb Chr 9: 59.68 – 59.72 Mb
PubMed search [3] [4]
Wikidata
View/Edit Human View/Edit Mouse

GRAM domain-containing 2A protein (GRAMD2A; formerly GRAMD2) is a protein encoded by the GRAMD2A gene. [5] Like GRAMD2B, the protein consists of a GRAM domain and a transmembrane domain that anchors it to the endoplasmic reticulum. [6] [7]

GRAMD2A is a mammalian representative of the yeast lipid transfer proteins anchored at a membrane contact site (LAM) family. [7] It has four paralogs: GRAMD1A, GRAMD1B, GRAMD1C and GRAMD2B. Unlike LAM and its paralogs except GRAMD2B, GRAMD2A lacks a VASt domain.

The protein localizes to sites where membranes from different organelles are in close apposition. [7] There, it tethers the endoplasmic reticulum to the plasma membrane through its GRAM domain binding phosphatidylinositol 4,5-bisphosphate in the plasma membrane at sites enriched for the phospholipid. [7] The protein ensures proper stromal interaction molecule 1 (STIM1) recruitment to these sites of membrane contact as part of the store-operated calcium entry pathway – a component of intracellular calcium homeostasis. [7]

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GRAM domain containing 1B, also known as GRAMD1B, Aster-B and KIAA1201, is a protein that is encoded by the GRAMD1B gene. It contains a transmembrane region and two domains of known function; the GRAM domain and a VASt domain. It is predicted to localize in the nucleus, supported by several nuclear transport signals and nuclearly associated motifs. This highly conserved gene is found in a variety of vertebrates and invertebrates, however is not found in bacteria or fungi.

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GRAM domain containing 1A also known as Aster-A is a protein that is encoded by the GRAMD1A gene. It contains a transmembrane region, a GRAM domain and a VASt domain that can bind cholesterol. GRAMD1A has four paralogs: GRAMD1B and GRAMD1C and two without VASt domains, GRAMD2A and GRAMD2B. These proteins are mammalian representatives of the yeast lipid transfer proteins anchored at a membrane contact site (LAM) family.

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GRAMD1C protein-coding gene in the species Homo sapiens

GRAM domain containing 1C also known as Aster-C is a protein that is encoded by the GRAMD1C gene. It contains a transmembrane region, a GRAM domain and a VASt domain.

GRAM domain-containing 2B

GRAM domain-containing 2B protein, also known as NS3TP2 and HCV NS3-transactivated protein 2 is a protein encoded by the GRAMD2B gene.

VAD1 analog of StAR-related lipid transfer (VASt) is a steroidogenic acute regulatory protein‐related lipid transfer (StART)-like lipid-binding domain first identified in the vad1 protein in Arabidopsis thaliana. Proteins containing these domains are found in eukaryotes and usually contain another lipid-binding domain, typically the GRAM domain and sometimes the C2 domain in plants and the integral peroxisomal membrane peroxin Pex24p domain in oomycetes.

References

  1. 1 2 3 GRCh38: Ensembl release 89: ENSG00000175318 - Ensembl, May 2017
  2. 1 2 3 GRCm38: Ensembl release 89: ENSMUSG00000074259 - Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. "GRAMD2A GRAM domain containing 2A [ Homo sapiens (human) ]" . Retrieved March 7, 2020.
  6. "RecName: Full=GRAM domain-containing protein 2A)" . Retrieved March 7, 2020.
  7. 1 2 3 4 5 Besprozvannaya M, Dickson E, Li H, Ginburg KS, Bers DM, Auwerx J, Nunnari J (February 2018). "GRAM domain proteins specialize functionally distinct ER-PM contact sites in human cells". eLife. 22 (7): e31019. doi:10.7554/eLife.31019. PMC   5823543 . PMID   29469807.