Otidae is a clade that includes the superorders Otidimorphae and Strisores. It was identified in 2014 by genome analysis. Earlier it was thought that Strisores was closely related to birds such as pigeons, flamingos, tropicbirds, and the sunbittern and kagu in the taxon Metaves, but subsequent work has provided evidence that Metaves is polyphyletic. Although analyses of genome data provided relatively high support for monophyly of Otidae, indicating that it occupies a basal branch of the clade Passerea, other analyses of large data matrices have not recovered a clade comprising Otidimorphae and Strisores, raising questions about the monophyly of Otidae.
Neoaves is a clade that consists of all modern birds with the exception of Paleognathae and Galloanserae. Almost 95% of the roughly 10,000 known species of extant birds belong to the Neoaves.
Apodimorphae is a clade of strisorean birds that include the extant families Trochilidae (hummingbirds), Hemiprocnidae (treeswifts), Apodidae (swifts), and Aegothelidae (owlet-nightjars), as well as many fossil families. This grouping of birds has been supported in a variety of recent studies. There are two higher classification schemes that have been proposed for the apodimorph families. One is all strisorean birds are classified in the order Caprimulgiformes, while the other is the strisorean birds are split into several distinct orders. In this case Apodimorphae is a subclade of Strisores that includes the orders Aegotheliformes and the Apodiformes. A similar name for the group Daedalornithes has been used for the owlet-night-apodiform clade, there is a difference between the two names with Apodimorphae defined as the total-group and Daedalornithes defined as the crowned group.
Mirandornithes is a clade that consists of flamingos and grebes. Many scholars use the term Phoenicopterimorphae for the superorder containing flamingoes and grebes.
Aequornithes, or core water birds, are defined as "the least inclusive clade containing Gaviidae and Phalacrocoracidae".
The order Falconiformes is represented by the extant family Falconidae and a handful of enigmatic Paleogene species. Traditionally, the other bird of prey families Cathartidae, Sagittariidae (secretarybird), Pandionidae (ospreys), Accipitridae (hawks) were classified in Falconiformes. A variety of comparative genome analysis published since 2008, however, found that falcons are part of a clade of birds called Australaves, which also includes seriemas, parrots and passerines. Within Australaves falcons are more closely related to the parrot-passerine clade (Psittacopasserae), which together they form the clade Eufalconimorphae. The hawks and vultures occupy a basal branch in the clade Afroaves in their own clade Accipitrimorphae, closer to owls and woodpeckers.
Eurypygiformes is an order formed by the kagus, comprising two species in the family Rhynochetidae endemic to New Caledonia, and the sunbittern from the tropical regions of the Americas. Its closest relatives appear to be the tropicbirds of the tropical Atlantic, Indian, and Pacific oceans.
Cariamiformes is an order of primarily flightless birds that has existed for over 60 million years. The group includes the family Cariamidae (seriemas) and the extinct families Phorusrhacidae, Bathornithidae, Idiornithidae and Ameghinornithidae. Though traditionally considered a suborder within Gruiformes, both morphological and genetic studies show that it belongs to a separate group of birds, Australaves, whose other living members are Falconidae, Psittaciformes and Passeriformes.
Strisores, sometimes called nightbirds, is a clade of birds that includes the living families and orders Caprimulgidae, Nyctibiidae (potoos), Steatornithidae (oilbirds), Podargidae (frogmouths), Apodiformes, as well as the Aegotheliformes (owlet-nightjars) whose distinctness was only recently realized. The Apodiformes and the Aegotheliformes form the Daedalornithes.
Australaves is a recently defined clade of birds, consisting of the Eufalconimorphae as well as the Cariamiformes. They appear to be the sister group of Afroaves. As in the case of Afroaves, the most basal clades have predatory extant members, suggesting this was the ancestral lifestyle; however, some researchers like Darren Naish are skeptical of this assessment, since some extinct representatives such as the herbivorous Strigogyps led other lifestyles. Basal parrots and falcons are at any rate vaguely crow-like and probably omnivorous.
Afroaves is a clade of birds, consisting of the kingfishers and kin (Coraciiformes), woodpeckers and kin (Piciformes), hornbills and kin (Bucerotiformes), trogons (Trogoniformes), cuckoo roller (Leptosomiformes), mousebirds (Coliiformes), owls (Strigiformes), raptors (Accipitriformes) and New World vultures (Cathartiformes). The most basal clades are predatory, suggesting the last common ancestor of Afroaves was also a predatory bird.
Columbea is a clade suggested by genome analysis that contains Columbiformes, Pteroclidae (sandgrouse), Mesitornithidae (mesites) and Mirandornithes. Until their recent placement as the sister taxon to Passerea, in the last decade various genetic analysis found them to be in the obsolete clade Metaves.
Passerea is a clade of neoavian birds that was proposed by Jarvis et al. (2014). Their genomic analysis recovered two major clades within Neoaves, Passerea and Columbea, and concluded that both clades appear to have many ecologically driven convergent traits.
Gruimorphae is a clade of birds that contains the orders Charadriiformes and Gruiformes identified by molecular analysis. This grouping has had historical support, as various charadriiform families such as the families Pedionomidae and Turnicidae were classified as gruiforms. It may also have support from the fossil record since the discovery of Nahmavis from the Early Eocene of North America.
Eurypygimorphae or Phaethontimorphae is a clade of birds that contains the orders Phaethontiformes (tropicbirds) and Eurypygiformes recovered by genome analysis. The relationship was first identified in 2013 based on their nuclear genes. Historically these birds were placed at different parts of the tree, with tropicbirds in Pelecaniformes and the kagu and sunbittern in Gruiformes. Some genetic analyses have placed the eurypygimorph taxa in the controversial and obsolete clade Metaves, with uncertain placement within that group. More recent molecular studies support their grouping together in Eurypygimorphae, which is usually recovered as the sister taxon to Aequornithes within Ardeae.
Phaethoquornithes is a clade of birds that contains Eurypygimorphae and Aequornithes, which was first recovered by genome analysis in 2014. Members of Eurypygimorphae were originally classified in the obsolete group Metaves, and Aequornithes were classified as the sister taxon to Musophagiformes or Gruiformes.
Columbimorphae is a clade discovered by genome analysis that includes birds of the orders Columbiformes, Pterocliformes (sandgrouse), and Mesitornithiformes (mesites). Previous analyses had also recovered this grouping, although the exact relationships differed. Some studies indicated a sister relationship between sandgrouse and pigeons while other studies favored a sister grouping of mesites and sandgrouse instead.
Columbaves is a clade that contains Columbimorphae and Otidimorphae discovered by genomic analysis by Prum et al. (2015). This conflicts with the Columbea and Otidae hypotheses which Mirandornithes are the sister taxon to Columbimorphae and Cypselomorphae the sister taxon to Otidimorphae, respectively, found by Jarvis et al. (2014). Neither hypothesis supports the two subdivisions of Metaves and Coronoaves as previous studies had found.
Aequorlitornithes is a clade of waterbirds recovered in a comprehensive genomic systematic study using nearly 200 species in 2015. It contains the clades Charadriiformes, Mirandornithes and Phaethoquornithes. Previous studies have found different placement for the clades in the tree.
Inopinaves is a clade of neoavian birds recovered in a compressive genomic systematic study using nearly 200 species in 2015. It contains the clades Opisthocomiformes (hoatzin) and Telluraves ; the study shows that the hoatzin diverged from other birds 64 million years ago. Previous studies have placed the hoatzin in different parts of the bird family tree; however, despite its unusual morphology, genetic studies have shown the hoatzin is not as primitive or as ancient as once thought; it could be a very derived bird that reverted to or retains some plesiomorphic traits.
