Potato spindle tuber viroid | |
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Virus classification | |
(unranked): | Viroid |
Family: | Pospiviroidae |
Genus: | Pospiviroid |
Species: | Potato spindle tuber viroid |
Strains | |
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The potato spindle tuber viroid (PSTVd, Pospiviroid fusituberis) was the first viroid to be identified. [1] [2] [3] [4] PSTVd is a small, single stranded circular RNA molecule [5] closely related to the chrysanthemum stunt viroid. Present within the viroidal RNA is the Pospiviroid RY motif stem loop common to its genus. The natural hosts are potatoes (Solanum tuberosum) and tomatoes (Solanum lycopersicum). All potatoes and tomatoes are susceptible to PSTVd and there is no form of natural resistance. Natural infections have also been seen in avocados and infections in other solanaceous crops have been induced in the laboratory. Until 2017 PSTVd was thought to be unable to infect Solanum sisymbriifolium . [6] Then in May seeds exported by a Dutch company were noticed to be infected. [6] These seeds were shipped from the company, but had been originally bred to their specifications in two Asian countries. [6] Pstv also causes Tomato bunchy top and is seed transmitted in tomato. [7] it contains single stranded RNA without protein coat.
It was discovered by Theodor Otto Diener, who is a plant pathologist at the U.S Department of Agriculture's Research Center in Beltsville, Maryland, and discovered it in 1971. He named it viroid because it is 1/80th size of a virus. [3]
Different strains of PSTVd exist and symptoms range from mild to severe. [8] Mild strains produce no obvious symptoms. Symptoms in severe strains are dependent on environmental conditions and are most severe in hot conditions. [9] Symptoms may be mild in initial infections but become progressively worse in the following generations. Common symptoms of severe infections include color changes in the foliage, smaller leaves and spindle-like elongation. Sprouting also occurs at a slower rate than in unaffected potatoes. [10] Infected tomatoes are slower to show symptoms which include stunted growth with a ‘bunchy top’ caused by shortened inter-nodes. Leaves become yellow or purple and often become curled and twisted. Necrosis eventually occurs in the veins of the bottom and middle leaves and the top leaves decrease in size. Fruit ripening is also affected leading to hard, small, dark green tomatoes.
Long distance spread of PSTVd usually occurs via infected seeds but transmission via aphids ( Myzus persicae ) also occurs but only in the presence of PLRV (potato leaf roll virus). Mechanical transmission also occurs once it has been introduced to an area.
PSTVd comprises 359 nucleotides.
Primary Structure |
1 CGGAACUAAA CUCGUGGUUC CUGUGGUUCA CACCUGACCU CCUGAGCAGA AAAGAAAAAA 61 GAAGGCGGCU CGGAGGAGCG CUUCAGGGAU CCCCGGGGAA ACCUGGAGCG AACUGGCAAA 121 AAAGGACGGU GGGGAGUGCC CAGCGGCCGA CAGGAGUAAU UCCCGCCGAA ACAGGGUUUU 181 CACCCUUCCU UUCUUCGGGU GUCCUUCCUC GCGCCCGCAG GACCACCCCU CGCCCCCUUU 241 GCGCUGUCGC UUCGGCUACU ACCCGGUGGA AACAACUGAA GCUCCCGAGA ACCGCUUUUU 301 CUCUAUCUUA CUUGCUUCGG GGCGAGGGUG UUUAGCCCUU GGAACCGCAG UUGGUUCCU |
Secondary Structure |
Systemic movement within the infected host is through the phloem. [D 1]
Viroids are small single-stranded, circular RNAs that are infectious pathogens. Unlike viruses, they have no protein coating. All known viroids are inhabitants of angiosperms, and most cause diseases, whose respective economic importance to humans varies widely. A recent metatranscriptomics study suggests that the host diversity of viroids and other viroid-like elements is broader than previously thought and that it would not be limited to plants, encompassing even the prokaryotes.
Virusoids are circular single-stranded RNA(s) dependent on viruses for replication and encapsidation. The genome of virusoids consists of several hundred (200–400) nucleotides and does not code for any proteins.
Theodor Otto Diener was a Swiss-American plant pathologist. In 1971, he discovered that the causative agent of the potato spindle tuber disease is not a virus, but a novel agent, which consists solely of a short strand of single-stranded RNA without a protein capsid, eighty times smaller than the smallest viruses. He proposed to name it, and similar agents yet to be discovered, viroids. Viroids displaced viruses as the smallest known infectious agents.
Pospiviroid is a genus of ssRNA viroids that infects plants, most commonly tubers. It belongs to the family Pospiviroidae. The first viroid discovered was a pospiviroid, the PSTVd species.
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