Pseudomonas amygdali

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Pseudomonas amygdali
Scientific classification OOjs UI icon edit-ltr.svg
Domain: Bacteria
Kingdom: Pseudomonadati
Phylum: Pseudomonadota
Class: Gammaproteobacteria
Order: Pseudomonadales
Family: Pseudomonadaceae
Genus: Pseudomonas
Species:
P. amygdali
Binomial name
Pseudomonas amygdali
Psallidas and Panagopoulos 1975
Type strain
ATCC 33614

CCUG 32770
CFBP 3205
CIP 106734
DSM 7298
ICMP 3918
LMG 13184
NCPPB 2607

Contents

Pathovars

P. a. pv. aesculi
P. a. pv. amygdali
P. a. pv. ciccaronei
P. a. pv. dendropanacis
P. a. pv. eriobotryae
P. a. pv. glycinea
P. a. pv. hibisci
P. a. pv. lachrymans
P. a. pv. mellea
P. a. pv. mori
P. a. pv. morsprumorum
P. a. pv. myricae
P. a. pv. phaseolicola
P. a. pv. photiniae
P. a. pv. sesami
P. a. pv. tabaci
P. a. pv. ulmi

Pseudomonas amygdali is a Gram-negative plant pathogenic bacterium. [1] It is named after its ability to cause disease on almond ( Prunus amygdalus ) trees. Different analyses, including 16S rRNA analysis, [2] DNA-DNA hybridization, [3] and MLST [4] [5] [6] [7] clearly placed P. amygdali in the P. syringae group together with the species Pseudomonas ficuserectae and Pseudomonas meliae , and 27 pathovars of Pseudomonas syringae / Pseudomonas savastanoi , constituting a single, well-defined phylogenetic group which should be considered as a single species. This phylogenetic group has not been formally named because of the lack of reliable means to differentiate it phenotypically from closely related species, [3] and it is currently known as either genomospecies 2 [3] or phylogroup 3. [4] [5] [8] When it is formally named, the correct name for this new species should be Pseudomonas amygdali, [3] which takes precedence over all the other names of taxa from this group, including Pseudomonas savastanoi , which is and inadequate and confusing name whose use is not recommended . [3] [9]

Pathovars

References

  1. Smith, Dunez, Lelliot, Phillips and Archer (1988) European Handbook of Plant Disease. Blackwell Scientific Publications.
  2. Anzai; et al. (Jul 2000). "Phylogenetic affiliation of the pseudomonads based on 16S rRNA sequence". Int J Syst Evol Microbiol. 50 (4): 1563–89. doi:10.1099/00207713-50-4-1563. PMID   10939664.
  3. 1 2 3 4 5 6 7 Gardan, L.; Shafik, H.; Belouin, S.; Broch, R.; Grimont, F.; Grimont, P. A. D. (1999). "DNA relatedness among the pathovars of Pseudomonas syringae and description of Pseudomonas tremae sp. nov. and Pseudomonas cannabina sp. nov. (ex Sutic and Dowson 1959)". International Journal of Systematic and Evolutionary Microbiology. 49 (2): 469–478. doi: 10.1099/00207713-49-2-469 . PMID   10319466.
  4. 1 2 3 4 Berge, Odile; Monteil, Caroline L.; Bartoli, Claudia; Chandeysson, Charlotte; Guilbaud, Caroline; Sands, David C.; Morris, Cindy E. (2014-09-03). "A User's Guide to a Data Base of the Diversity of Pseudomonas syringae and Its Application to Classifying Strains in This Phylogenetic Complex". PLOS ONE. 9 (9) e105547. Bibcode:2014PLoSO...9j5547B. doi: 10.1371/journal.pone.0105547 . ISSN   1932-6203. PMC   4153583 . PMID   25184292.
  5. 1 2 Hwang, Michael S. H.; Morgan, Robyn L.; Sarkar, Sara F.; Wang, Pauline W.; Guttman, David S. (2005-09-01). "Phylogenetic Characterization of Virulence and Resistance Phenotypes of Pseudomonas syringae". Applied and Environmental Microbiology. 71 (9): 5182–5191. Bibcode:2005ApEnM..71.5182H. doi:10.1128/AEM.71.9.5182-5191.2005. ISSN   0099-2240. PMC   1214625 . PMID   16151103.
  6. Bull, Carolee T.; Clarke, Christopher R.; Cai, Rongman; Vinatzer, Boris A.; Jardini, Teresa M.; Koike, Steven T. (2011-02-15). "Multilocus Sequence Typing of Pseudomonas syringae Sensu Lato Confirms Previously Described Genomospecies and Permits Rapid Identification of P. syringae pv. coriandricola and P. syringae pv. apii Causing Bacterial Leaf Spot on Parsley". Phytopathology. 101 (7): 847–858. doi: 10.1094/PHYTO-11-10-0318 . ISSN   0031-949X. PMID   21323469.
  7. Parkinson, N.; Bryant, R.; Bew, J.; Elphinstone, J. (2010). "Rapid phylogenetic identification of members of the Pseudomonas syringae species complex using the rpoD locus". Plant Pathology. 60 (2): 338–344. doi: 10.1111/j.1365-3059.2010.02366.x .
  8. Baltrus, David A.; McCann, Honour C.; Guttman, David S. (2017-01-01). "Evolution, genomics and epidemiology of Pseudomonas syringae". Molecular Plant Pathology. 18 (1): 152–168. doi:10.1111/mpp.12506. ISSN   1364-3703. PMC   6638251 . PMID   27798954.
  9. Young, J. M. (September 2010). "Taxonomy of Pseudomonas syringae". Journal of Plant Pathology. 92 (1sup): S1.5–S1.14. Archived from the original on 2017-10-13. Retrieved 2017-10-13.
  10. 和雄, 高梨; 寛二, 清水 (1989). "クリかいよう病を起こすPseudomonas syringae pv. castaneae pv. nov". 日本植物病理学会報. 55 (4): 397–403. doi: 10.3186/jjphytopath.55.397 .
  11. Kamiunten, Hiroshi; Nakao, Takeharu; Oshida, Shiomi (2000-08-01). "Pseudomonas syringae pv. cerasicola, pv. nov., the Causal Agent of Bacterial Gall of Cherry Tree". Journal of General Plant Pathology. 66 (3): 219–224. Bibcode:2000JGPP...66..219K. doi:10.1007/PL00012949. ISSN   1345-2630. S2CID   8057063.
  12. Oginh, Choei; Kubo, Yoshibumi; Higuchi, Hiroshi; Takikawa, Yuichi (1990). "Bacterial gall diseases of himeyuzuriha (Daphniphyllum teijsmanni Z.) caused by Pseudomonas syringae pv. daphniphylli pv. nov". Journal of the Japanese Forestry Society. 72 (1): 17–22. doi:10.11519/jjfs1953.72.1_17.
  13. 1 2 3 4 Caballo-Ponce, Eloy; Murillo, Jesús; Martínez-Gil, Marta; Moreno-Pérez, Alba; Pintado, Adrián; Ramos, Cayo (2017). "Knots Untie: Molecular Determinants Involved in Knot Formation Induced by Pseudomonas savastanoi in Woody Hosts". Frontiers in Plant Science. 8: 1089. doi: 10.3389/fpls.2017.01089 . ISSN   1664-462X. PMC   5478681 . PMID   28680437.