Sodalis | |
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Genus: | Sodalis Dale and Maudlin 1999 |
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Sodalis is a genus of bacteria within the family Pectobacteriaceae. This genus contains several insect endosymbionts and also a free-living group. It is studied due to its potential use in the biological control of the tsetse fly. Sodalis is an important model for evolutionary biologists because of its nascent endosymbiosis with insects.
Sodalis was described in louse fly ( Craterina melbae ), [2] in stinkbug (Cantao ocellatus) [3] in Louse (Columbicola columbae) [4] and in other ectoparasites of water mammals (like Proechinophthirus fluctus, Louse). [5]
Species Candidatus Sodalis melophagi was described in sheep ked ( Melophagus ovinus ). [6]
Another species Candidatus Sodalis pierantonius str. SOPE is known as endosymbiont of rice weevil ( Sitophilus oryzae ) and can supply rice weevil with essential vitamins like pantothenic acid, riboflavin, and biotin. [7]
A species of bacteria within this genera, Sodalis glossinidius , was found in the hemolymph of the tsetse fly (Glossina morsitans). [8] This bacteria has been used in paratransgenesis approaches to fight sleeping sickness. [9] Genome analysis shows that symbiosis between Sodalis glossinidius and tsetse fly is evolutionary young. Sodalis has large genome and pseudogenes which remain, however, active in cell-free culture. [10] Fly cleared from its native symbionts can be successfully repopulated by Sodalis from other fly species. [11] This might be used in potential biological control of tsetse fly.
The Sodalis bacterium has also been identified as free-living with no association to insects.
Sodalis praecaptivus, was isolated from a hand injured by a tree branch. [12]
Sodalis ligni was found to be widely associated with decomposing wood of various tree species. [13] S. ligni, unlike other Sodalis species, contains nitrogen fixation genes. Such ecological trait might be important for other saprotrophs living in deadwood as this habitat is nitrogen-limited. [14]
Compared to endosymbionts, free-living Sodalis species are characterized by larger genomes, longer genes, and fewer pseudogenes. These characteristics point to asymbiotic lifestyle of these species. Due to known free-living species and related endosymbionts with evolutionarily young link to insect, the whole genus is important for studies about development of the insect endosymbiosis.
An endosymbiont or endobiont is an organism that lives within the body or cells of another organism. Typically the two organisms are in a mutualistic relationship. Examples are nitrogen-fixing bacteria, which live in the root nodules of legumes, single-cell algae inside reef-building corals and bacterial endosymbionts that provide essential nutrients to insects.
A bacteriocyte, also known as a mycetocyte, is a specialized adipocyte found primarily in certain insect groups such as aphids, tsetse flies, German cockroaches, weevils. These cells contain endosymbiotic organisms such as bacteria and fungi, which provide essential amino acids and other chemicals to their host. Bacteriocytes may aggregate into a specialized organ called the bacteriome.
Wigglesworthia glossinidia is a species of gram-negative bacteria that is a bacterial endosymbiont of the tsetse fly. Because of this relationship, Wigglesworthia has lost a large part of its genome, leaving it with one of the smallest genomes of any living organism, consisting of a single chromosome of 700,000 bp and a plasmid of 5,200. Together with Buchnera aphidicola, Wigglesworthia has been the subject of genetic research into the minimal genome necessary for any living organism.
Paratransgenesis is a technique that attempts to eliminate a pathogen from vector populations through transgenesis of a symbiont of the vector. The goal of this technique is to control vector-borne diseases. The first step is to identify proteins that prevent the vector species from transmitting the pathogen. The genes coding for these proteins are then introduced into the symbiont, so that they can be expressed in the vector. The final step in the strategy is to introduce these transgenic symbionts into vector populations in the wild. One use of this technique is to prevent mortality for humans from insect-borne diseases. Preventive methods and current controls against vector-borne diseases depend on insecticides, even though some mosquito breeds may be resistant to them. There are other ways to fully eliminate them. “Paratransgenesis focuses on utilizing genetically modified insect symbionts to express molecules within the vector that are deleterious to pathogens they transmit.” The acidic bacteria Asaia symbionts are beneficial in the normal development of mosquito larvae; however, it is unknown what Asais symbionts do to adult mosquitoes.
"Candidatus Midichloria" is a candidatus genus of Gram-negative, non-endospore-forming bacteria, with a bacillus shape around 0.45 μm in diameter and 1.2 μm in length. First described in 2004 with the temporary name IricES1, "Candidatus Midichloria" species are symbionts of several species of hard ticks. They live in the cells of the ovary of the females of this tick species. These bacteria have been observed in the mitochondria of the host cells, a trait that has never been described in any other symbiont of animals.
Serratia symbiotica is a species of bacteria that lives as a symbiont of aphids. In the aphid Cinara cedri, it coexists with Buchnera aphidicola, given the latter cannot produce tryptophan. It is also known to habitate in Aphis fabae. Together with other endosymbionts, it provides aphids protection against parasitoids.
Regiella insecticola is a species of bacteria, that lives as a symbiont of aphids. It shows a relationship with Photorhabdus species, together with Hamiltonella defensa. Together with other endosymbionts, it provides aphids protection against parasitoids.
Hamiltonella defensa is a species of bacteria. It is maternally or sexually transmitted and lives as an endosymbiont of whiteflies and aphids, meaning that it lives within a host, protecting its host from attack. It does this through bypassing the host's immune responses by protecting its host against parasitoid wasps. However, H. defensa is only defensive if infected by a virus. H. defensa shows a relationship with Photorhabdus species, together with Regiella insecticola. Together with other endosymbionts, it provides aphids protection against parasitoids. It is known to habitate Bemisia tabaci.
Vibrio coralliilyticus is a Gram-negative, rod-shaped bacterium. It has a polar flagellum that is used for motility and has been shown to be critical for its virulence to corals. It is a versatile pathogen, impacting several marine invertebrates including Pocillopora damicornis corals, both the Pacific and Eastern Oyster's larvae and some vertebrates such as the rainbow trout. It is a bacterium of considerable interest given its direct contribution to temperature dependent coral bleaching as well as its impacts on aquaculture where it can contribute to significant mortalities in larval oyster hatcheries. There are several known virulent strains, which appear on both the Pacific and Atlantic Coasts of the United States. After its initial discovery some strains were incorrectly classified as Vibrio tubiashii including the RE22 and RE98 strains but were later reclassified as Vibrio coralliilyticus.
Sodalis glossinidius is a species of bacteria, the type and only species of its genus. It is a microaerophilic secondary endosymbiont of the tsetse fly. Strain M1T is the type strain. Sodalis glossinidius is the only gammaproteobacterial insect symbiont to be cultured and thus amenable to genetic modification, suggesting that it could be used as part of a control strategy by vectoring antitrypanosome genes. The organism may increase the susceptibility of tsetse flies to trypanosomes.
Crataerina melbae is a species of biting fly in the family of louse flies Hippoboscidae. Its hosts are swift species including the Alpine, Pacific, Common and mottled swifts.
Blochmannia is a genus of symbiotic bacteria found in carpenter ant. There are over 1000 species of these ants and, as of 2014, of the over 30 species of carpenter ant that have been investigated, all contain some form of Blochmannia. The bacteria filled cells currently known as members of the genus Blochmannia were first discovered by zoologist F. Blochmann in the ovaries and midguts of insects in the 1880s. In 2000 Candidatus Blochmannia was proposed as its own genus.
Nasuia deltocephalinicola was reported in 2013 to have the smallest genome of all bacteria, with 112,091 nucleotides. For comparison, the human genome has 3.2 billion nucleotides. The second smallest genome, from bacteria Tremblaya princeps, has 139,000 nucleotides. While N. deltocephalinicola has the smallest number of nucleotides, it has more protein-coding genes (137) than some bacteria.
The initial acquisition of microbiota is the formation of an organism's microbiota immediately before and after birth. The microbiota are all the microorganisms including bacteria, archaea and fungi that colonize the organism. The microbiome is another term for microbiota or can refer to the collected genomes.
"Candidatus Karelsulcia muelleri" is an aerobic, gram-negative, bacillus bacterium that is a part of the phylum Bacteroidota. "Ca. K. muelleri" is an obligate and mutualistic symbiotic microbe commonly found occupying specialized cell compartments of sap-feeding insects called bacteriocytes. A majority of the research done on "Ca. K. muelleri" has detailed its relationship with the host Homalodisca vitripennis. Other studies have documented the nature of its residency in other insects like the maize leafhopper (Cicadulina) or the spittlebug (Cercopoidea). "Ca. K. muelleri" is noted for its exceptionally minimal genome and it is currently identified as having the smallest known sequenced Bacteroidota genome at only 245 kilobases.
Hologenomics is the omics study of hologenomes. A hologenome is the whole set of genomes of a holobiont, an organism together with all co-habitating microbes, other life forms, and viruses. While the term hologenome originated from the hologenome theory of evolution, which postulates that natural selection occurs on the holobiont level, hologenomics uses an integrative framework to investigate interactions between the host and its associated species. Examples include gut microbe or viral genomes linked to human or animal genomes for host-microbe interaction research. Hologenomics approaches have also been used to explain genetic diversity in the microbial communities of marine sponges.
Vertical transmission of symbionts is the transfer of a microbial symbiont from the parent directly to the offspring. Many metazoan species carry symbiotic bacteria which play a mutualistic, commensal, or parasitic role. A symbiont is acquired by a host via horizontal, vertical, or mixed transmission.
Glossina fuscipes is a riverine fly species in the genus Glossina, which are commonly known as tsetse flies. Typically found in sub-Saharan Africa but with a small Arabian range, G. fuscipes is a regional vector of African trypanosomiasis, commonly known as sleeping sickness, that causes significant rates of morbidity and mortality among humans and livestock. Consequently, the species is among several being targeted by researchers for population control as a method for controlling the disease.
Candidatus Arsenophonus arthropodicus is a Gram-negative and intracellular secondary (S) endosymbiont that belongs to the genus Arsenophonus. This bacterium is found in the Hippoboscid louse fly, Pseudolynchia canariensis. S-endosymbionts are commonly found in distinct tissues. Strains of recovered Arsenophonus found in arthropods share 99% sequence identification in the 16S rRNA gene across all species. Arsenophonus-host interactions involve parasitism and mutualism, including a popular mechanism of "male-killing" found commonly in a related species, Arsenophonus nasoniae. This species is considered "Ca. A. arthropodicus" due it being as of yet uncultured.
Glossina morsitans is a species of tsetse fly in the genus Glossina. It is one of the major vectors of Trypanosoma brucei rhodesiense in African savannas.