9-cis-epoxycarotenoid dioxygenase | |||||||||
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Identifiers | |||||||||
EC no. | 1.13.11.51 | ||||||||
CAS no. | 199877-10-6 | ||||||||
Databases | |||||||||
IntEnz | IntEnz view | ||||||||
BRENDA | BRENDA entry | ||||||||
ExPASy | NiceZyme view | ||||||||
KEGG | KEGG entry | ||||||||
MetaCyc | metabolic pathway | ||||||||
PRIAM | profile | ||||||||
PDB structures | RCSB PDB PDBe PDBsum | ||||||||
Gene Ontology | AmiGO / QuickGO | ||||||||
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9-cis-epoxycarotenoid dioxygenase (EC 1.13.11.51, nine-cis-epoxycarotenoid dioxygenase, NCED, AtNCED3, PvNCED1, VP14) is an enzyme in the biosynthesis of abscisic acid (ABA), [1] with systematic name 9-cis-epoxycarotenoid 11,12-dioxygenase. [2] [3] [4] [5] [6] This enzyme catalyses the following chemical reaction
9-cis-epoxycarotenoid dioxygenase contains iron(II).
NCED belongs to a gene family called Carotenoid Cleavage Dioxygenases (CCD), which contains both CCD genes and NCED genes. [7] CCD is available in all plants (including algae), while NCED is currently only observed in land plants. [8] Please note some algae CCD genes have been incorrectly named NCED. There are usually multiple copies of NCED in a species.
The enzyme catalyses the rate-limiting step of ABA biosynthesis. [1] Interestingly, though ABA is also produced in algae, NCED is currently only observed in land plants, suggesting ABA is produced in a different pathway in algae compare to land plants. [8]
Though first identified in maize/corn, [2] [3] it is now quite extensively studied in the model plant Arabidopsis thaliana (Arabidopsis). The most studied NCED in Arabidopsis is the AtNCED3. Overexpression of the AtNCED3 gene improves the tolerance of transgenic plants to dehydration stress [6] as well as to salinity stress. Overexpression also leads to the overexpression of other genes induced by drought-stress. Transgenics containing AtNCED3 had greater root biomass, bigger pith size and higher level of photosynthesis. [9] It has been suggested that the AtNCED3 gene promoter contains G-box-like cis-acting elements which are responsible for dehydration-induced expression. [10]
Gene expression differs by plant organ. The gene may have a dual role in roots by either promoting or inhibiting the development of lateral roots. [11] [12] AtNCED3 functions in seeds by regulating the seed establishment and abortion, maturation of the embryo, and seed dormancy. Maternal ABA functions in the early stage of zygote development, while embryonal AtNCED3 expresses later for ABA synthesis in case of dormancy. Expression of the gene mainly happens in the maternal tissues in the basal part of seeds or funiculus. [11]
AtNCED3 gene expression responds to drought-stress. [13] [6] and salt-stress. [14] [9] The signal caused by low moisture in the air is first induced by the stomata of leaves and transferred to other cells and tissues, which upregulate the expression of the AtNCED3 gene and ABA synthesis. Stomata closure limits various processes, including air exchange, water loss and O2 release. The AtNCED3 gene is active and expressed under these circumstances. [13] [6] Accumulation of AtNCED3 mRNA and AtNCED3 protein was first found in the vascular parenchyma cells under drought stress, which suggested that plant drought tolerance relates to the development of plant vascular tissue. [13] Also, overexpression of AtNCED3 gene can improve plant salt tolerance.
Other NCED genes in Arabidopsis are less characterised. However, Tan et. al. (2003) [11] observed that other NCED is important in plants and seed development. For example, AtNCED2 and AtNCED9 genes are important in flower development, while AtNCED6 is important in seed dormancy and development. AtNCED5 is found to be important in seed dormancy, and it can interact with AtNCED3 for drought response. [15]
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Gibberellins (GAs) are plant hormones that regulate various developmental processes, including stem elongation, germination, dormancy, flowering, flower development, and leaf and fruit senescence. GAs are one of the longest-known classes of plant hormone. It is thought that the selective breeding of crop strains that were deficient in GA synthesis was one of the key drivers of the "green revolution" in the 1960s, a revolution that is credited to have saved over a billion lives worldwide.
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Abscisic acid is a plant hormone. ABA functions in many plant developmental processes, including seed and bud dormancy, the control of organ size and stomatal closure. It is especially important for plants in the response to environmental stresses, including drought, soil salinity, cold tolerance, freezing tolerance, heat stress and heavy metal ion tolerance.
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Strigolactones are a group of chemical compounds produced by roots of plants. Due to their mechanism of action, these molecules have been classified as plant hormones or phytohormones. So far, strigolactones have been identified to be responsible for three different physiological processes: First, they promote the germination of parasitic organisms that grow in the host plant's roots, such as Strigalutea and other plants of the genus Striga. Second, strigolactones are fundamental for the recognition of the plant by symbiotic fungi, especially arbuscular mycorrhizal fungi, because they establish a mutualistic association with these plants, and provide phosphate and other soil nutrients. Third, strigolactones have been identified as branching inhibition hormones in plants; when present, these compounds prevent excess bud growing in stem terminals, stopping the branching mechanism in plants.
Jian-Kang Zhu is a plant scientist, researcher and academic. He is a Senior Principal Investigator in the Shanghai Center for Plant Stress Biology, Chinese Academy of Sciences (CAS). He is also the Academic Director of CAS Center of Excellence in Plant Sciences.
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Christoph Benning is a German–American plant biologist. He is an MSU Foundation Professor and University Distinguished Professor at Michigan State University. Benning's research into lipid metabolism in plants, algae and photosynthetic bacteria, led him to be named Editor-in-Chief of The Plant Journal in October 2008.
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