Agrococcus

Agrococcus
Scientific classification
Domain:	Bacteria
Kingdom:	Bacillati
Phylum:	Actinomycetota
Class:	Actinomycetes
Order:	Micrococcales
Family:	Microbacteriaceae
Genus:	Agrococcus Groth et al. 1996 [1]
Type species
Agrococcus jenensis Groth et al. 1996
Species
See text.

Agrococcus is a genus in the phylum Actinomycetota (Bacteria). ^[2]

Etymology

The name Agrococcus derives from:
Greek noun agros, field or soil; Neo-Latin masculine gender noun coccus (from Greek masculine gender noun kokkos, grain, seed), coccus; Neo-Latin masculine gender noun Agrococcus a coccus from soil. ^[3]

A group at the University of British Columbia completed the first draft genome of a bacterium from the genus Agrococcus, which was isolated from modern microbialites found within Pavilion Lake, BC. ^[4]

Species

The genus contains 9 species, namely ^[3]

• A. baldri ( Zlamala et al. 2002; Neo-Latin genitive case noun baldri, of Baldr, ancient German god of light, referring to the photochromogenic behavior.) ^[5]
• A. carbonis (Dhanjal et al. 2010; Latin genitive case noun carbonis of charcoal or coal; referring to the fact it was isolated from the soil of a coal mine. ^[6]
• A. casei ( Bora et al. 2007,;: Latin genitive case noun casei, of cheese, named because the organism was isolated from smear-ripened cheeses.) ^[7]
• A. citreus ( Wieser et al. 1999; Latin masculine gender adjective citreus, of or pertaining to the citron-tree; intended to mean lemon-yellow, describing the lemon-yellow pigmentation.) ^[8]
• A. jejuensis ( Lee 2008; Neo-Latin masculine gender adjective jejuensis, of or belonging to Jeju, Republic of Korea, where the type strain was isolated.) ^[9]
• A. jenensis ( Groth et al. 1996, (Type species of the genus).; Neo-Latin masculine gender adjective jenensis, of or belonging to the Thuringian town Jena, where the organism was isolated.) ^[1]
• A. lahaulensis ( Mayilraj et al. 2006; Neo-Latin masculine gender adjective lahaulensis, of or pertaining to Lahaul Valley, located in the Indian Himalayas, where the type strain was isolated.) ^[10]
• A. pavilionensis (White III et al. 2018; Neo-Latin masculine gender adjective pavilionensis, of or pertaining to Pavilion Lake, located in Southeastern British Columbia, where the type strain was isolated.) ^[11]
• A. terreus ( Zhang et al. 2010; Latin masculine gender adjective terreus, of earth.) ^[12]
• A. versicolor ( Behrendt et al. 2008; Latin masculine gender adjective versicolor, colour changing.) ^[13]

See also

• Bacterial taxonomy
• Microbiology

References

1. "Agrococcus jenensis gen. nov., sp. nov., a New Genus of Actinomycetes with Diaminobutyric Acid in the Cell Wall". Archived from the original on 2007-09-17. Retrieved 2011-05-28.
2. Classification of Genera AC in LPSN ; Parte, Aidan C.; Sardà Carbasse, Joaquim; Meier-Kolthoff, Jan P.; Reimer, Lorenz C.; Göker, Markus (1 November 2020). "List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ". International Journal of Systematic and Evolutionary Microbiology. 70 (11): 5607–5612. doi: 10.1099/ijsem.0.004332 .
3. Agrococcus in LPSN ; Parte, Aidan C.; Sardà Carbasse, Joaquim; Meier-Kolthoff, Jan P.; Reimer, Lorenz C.; Göker, Markus (1 November 2020). "List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ". International Journal of Systematic and Evolutionary Microbiology. 70 (11): 5607–5612. doi: 10.1099/ijsem.0.004332 .
4. White RA 3rd, Grassa CJ, Suttle CA (July–August 2013). "First Draft Genome Sequence from a Member of the Genus Agrococcus, Isolated from Modern Microbialites". Genome Announcements. 1 (4): e00391–13. doi:10.1128/genomeA.00391-13. PMC   3695436 . PMID   23814108.
5. "Agrococcus baldri sp. nov., isolated from the air in the 'Virgilkapelle' in Vienna". Archived from the original on 2008-07-06. Retrieved 2011-05-28.
6. Dhanjal, S.; Kaur, I.; Korpole, S.; Schumann, P.; Cameotra, S. S.; Pukall, R.; Klenk, H. -P.; Mayilraj, S. (2010). "Agrococcus carbonis sp. nov., isolated from soil of a coal mine". International Journal of Systematic and Evolutionary Microbiology. 61 (6): 1253–8. doi: 10.1099/ijs.0.024745-0 . PMID   20601492.
7. Bora, N.; Vancanneyt, M.; Gelsomino, R.; Swings, J.; Brennan, N.; Cogan, T. M.; Larpin, S.; Desmasures, N.; Lechner, F. E.; Kroppenstedt, R. M.; Ward, A. C.; Goodfellow, M. (2007). "Agrococcus casei sp. Nov., isolated from the surfaces of smear-ripened cheeses". International Journal of Systematic and Evolutionary Microbiology. 57 (Pt 1): 92–97. doi: 10.1099/ijs.0.64270-0 . PMID   17220448.
8. "Agrococcus citreus sp. nov., isolated from a medieval wall painting of the chapel of Castle Herberstein (Austria)". Archived from the original on 2007-09-17. Retrieved 2011-05-28.
9. Lee, S. D. (2008). "Agrococcus jejuensis sp. Nov., isolated from dried seaweed". International Journal of Systematic and Evolutionary Microbiology. 58 (10): 2297–2300. doi:10.1099/ijs.0.65731-0. PMID   18842844.
10. Mayilraj, S.; Suresh, K.; Schumann, P.; Kroppenstedt, R. M.; Saini, H. S. (2006). "Agrococcus lahaulensis sp. Nov., isolated from a cold desert of the Indian Himalayas". International Journal of Systematic and Evolutionary Microbiology. 56 (8): 1807–1810. doi: 10.1099/ijs.0.64247-0 . PMID   16902012.
11. White III, R.; et al. (2018). "The Complete Genome and Physiological Analysis of the Microbialite-Dwelling Agrococcus pavilionensis sp. nov; Reveals Genetic Promiscuity and Predicted Adaptations to Environmental Stress". Frontiers in Microbiology. 9 (9): 2180. doi: 10.3389/fmicb.2018.02180 . PMC   6196244 . PMID   30374333.
12. Zhang, J.-Y.; Liu, X.-Y.; Liu, S. -J. (2009). "Agrococcus terreus sp. Nov. And Micrococcus terreus sp. Nov., isolated from forest soil". International Journal of Systematic and Evolutionary Microbiology. 60 (8): 1897–1903. doi: 10.1099/ijs.0.013235-0 . PMID   19783614.
13. Behrendt, U.; Schumann, P.; Ulrich, A. (2008). "Agrococcus versicolor sp. Nov., an actinobacterium associated with the phyllosphere of potato plants". International Journal of Systematic and Evolutionary Microbiology. 58 (12): 2833–2838. doi: 10.1099/ijs.0.2008/001610-0 . PMID   19060068.